Contains (1) the BEAST XML input files for the UCLD relaxed clock analyses (SRD06 substitution model), and (2) the resulting maximum clade credibility (MCC) tree files. The alignments used are the same as those in Figure 1 GTR.zip
This file contains 200 trees subsampled from a relaxed-clock MCMC analysis conducted in BEAST (see X...
XML for BEAST analysis on HCV 2k/1b full coding region with a single GTRΓ4 substitution model and a ...
This .zip file contains the xml input files of the best model for the *BEAST analysis and GMRF Skyri...
Contains (1) the BEAST XML input files for the UCLD relaxed clock analyses (SRD06 substitution model...
Contains (1) the BEAST XML input files for the HSLC analyses of the Figure 1 data under the SRD06 su...
Compressed zip file containing the input files of Extended Bayesian Skyline Plot (EBSP), Standard Ra...
Contains (1) the nexus format sequence alignments, (2) the BEAST XML input files for the HSLC analys...
Contains (1) the nexus format sequence alignments, (2) the BEAST XML input files for the HSLC analys...
Trees utilized in this study (a subsample of these trees is included in this submission as a separat...
These are the files associated with the strict molecular clock analyses including the BEAST XML file...
Compressed zip file containing the input files of Extended Bayesian Skyline Plot (EBSP), Standard Ra...
XML for BEAST analysis on HCV 2k/1b densely sampled coding region with four GTRΓ4 substitution model...
XML for BEAST analysis on HCV 2k/1b full coding region with nine GTRΓ4 substitution models and a sin...
XML for BEAST analysis on HCV 2k/1b densely sampled coding region with four GTRΓ4 substitution model...
XML for BEAST analysis on HCV 2k/1b full coding region with nine GTRΓ4 substitution models and nine ...
This file contains 200 trees subsampled from a relaxed-clock MCMC analysis conducted in BEAST (see X...
XML for BEAST analysis on HCV 2k/1b full coding region with a single GTRΓ4 substitution model and a ...
This .zip file contains the xml input files of the best model for the *BEAST analysis and GMRF Skyri...
Contains (1) the BEAST XML input files for the UCLD relaxed clock analyses (SRD06 substitution model...
Contains (1) the BEAST XML input files for the HSLC analyses of the Figure 1 data under the SRD06 su...
Compressed zip file containing the input files of Extended Bayesian Skyline Plot (EBSP), Standard Ra...
Contains (1) the nexus format sequence alignments, (2) the BEAST XML input files for the HSLC analys...
Contains (1) the nexus format sequence alignments, (2) the BEAST XML input files for the HSLC analys...
Trees utilized in this study (a subsample of these trees is included in this submission as a separat...
These are the files associated with the strict molecular clock analyses including the BEAST XML file...
Compressed zip file containing the input files of Extended Bayesian Skyline Plot (EBSP), Standard Ra...
XML for BEAST analysis on HCV 2k/1b densely sampled coding region with four GTRΓ4 substitution model...
XML for BEAST analysis on HCV 2k/1b full coding region with nine GTRΓ4 substitution models and a sin...
XML for BEAST analysis on HCV 2k/1b densely sampled coding region with four GTRΓ4 substitution model...
XML for BEAST analysis on HCV 2k/1b full coding region with nine GTRΓ4 substitution models and nine ...
This file contains 200 trees subsampled from a relaxed-clock MCMC analysis conducted in BEAST (see X...
XML for BEAST analysis on HCV 2k/1b full coding region with a single GTRΓ4 substitution model and a ...
This .zip file contains the xml input files of the best model for the *BEAST analysis and GMRF Skyri...
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