Full Bayesian inference for detecting copy number variants (CNV) from whole-genome sequencing (WGS) data is still largely infeasible due to computational demands. A recently introduced approach to perform Forward–Backward Gibbs sampling using dynamic Haar wavelet compression has alleviated issues of convergence and, to some extent, speed. Yet, the problem remains challenging in practice
Background: Hidden Markov Models (HMM) are often used for analyzing Comparative Genomic Hybridizatio...
Abstract Background One of the main types of genetic variations in cancer is Copy Number Variations ...
We have developed a statistical method for the analysis of array based CGH data to detect genomic ...
Background: Full Bayesian inference for detecting copy number variants (CNV) from whole-genome seque...
Hidden Markov Models (HMM) are a powerful and ubiquitous tool for segmentation and labeling in bioin...
By combining Haar wavelets with Bayesian Hidden Markov Models, we improve detection of genomic copy ...
Background One of the main types of genetic variations in cancer is Copy Number Variations (CNV). W...
DNA copy number variations (CNVs), which involve the deletion or duplication of subchromosomal segme...
To study chromosomal aberrations that may lead to cancer formation or genetic diseases, the array-ba...
Since the genomics era has started in the ’70s, microarray technologies have been extensively used f...
Copy number variation (CNV) is pervasive in the human genome and has been shown to contribute signif...
Next generation sequencing (NGS) technologies have profoundly impacted biological research and are b...
Genomic alterations have been linked to the development and progression of cancer. The technique of ...
Varying depth of high-throughput sequencing reads along a chromosome makes it possible to observe co...
Motivation: Efficient and accurate ascertainment of copy number variations (CNVs) at the population ...
Background: Hidden Markov Models (HMM) are often used for analyzing Comparative Genomic Hybridizatio...
Abstract Background One of the main types of genetic variations in cancer is Copy Number Variations ...
We have developed a statistical method for the analysis of array based CGH data to detect genomic ...
Background: Full Bayesian inference for detecting copy number variants (CNV) from whole-genome seque...
Hidden Markov Models (HMM) are a powerful and ubiquitous tool for segmentation and labeling in bioin...
By combining Haar wavelets with Bayesian Hidden Markov Models, we improve detection of genomic copy ...
Background One of the main types of genetic variations in cancer is Copy Number Variations (CNV). W...
DNA copy number variations (CNVs), which involve the deletion or duplication of subchromosomal segme...
To study chromosomal aberrations that may lead to cancer formation or genetic diseases, the array-ba...
Since the genomics era has started in the ’70s, microarray technologies have been extensively used f...
Copy number variation (CNV) is pervasive in the human genome and has been shown to contribute signif...
Next generation sequencing (NGS) technologies have profoundly impacted biological research and are b...
Genomic alterations have been linked to the development and progression of cancer. The technique of ...
Varying depth of high-throughput sequencing reads along a chromosome makes it possible to observe co...
Motivation: Efficient and accurate ascertainment of copy number variations (CNVs) at the population ...
Background: Hidden Markov Models (HMM) are often used for analyzing Comparative Genomic Hybridizatio...
Abstract Background One of the main types of genetic variations in cancer is Copy Number Variations ...
We have developed a statistical method for the analysis of array based CGH data to detect genomic ...