First principles of population genetics are used to obtain formulae relating the non-synonymous to synonymous substitution rate ratio to the selection coefficients acting at codon sites in protein-coding genes. Two theoretical cases are discussed and two examples from real data (a chloroplast gene and a virus polymerase) are given. The formulae give much insight into the dynamics of non-synonymous substitutions and may inform the development of methods to detect adaptive evolution
Deleterious mutations affecting biological function of proteins are constantly being rejected by pur...
Deleterious mutations affecting biological function of proteins are constantly being rejected by pur...
In protein-coding genes, synonymous mutations are often thought not to affect fitness and therefore ...
First principles of population genetics are used to obtain formulae relating the non-synonymous to s...
24 pages, 4 figures and 1 table. Manuscript written between January and April 201024 pages, 4 figure...
<p>Based on these parameters, amounts of adaptive evolution and the strength of purifying selection ...
The rate of non-synonymous substitution (dS), rate of synonymous substitution (dN) and the ratio of ...
There are numerous sources of variation in the rate of synonymous substitutions inside genes, such a...
There are numerous sources of variation in the rate of synonymous substitutions inside genes, such a...
Codon substitution models have traditionally attempted to uncover signatures of adaptation within pr...
International audienceModern methods to detecting adaptive evolution from interspecific protein-codi...
Selection modulates gene sequence evolution in different ways by constraining potential changes of a...
Protein-coding sequences have long been assumed to evolve under selection, but the quantification of...
<p>The rate of non-synonymous substitutions (Ka), the rate of synonymous substitutions (Ks) and the ...
Abstract. Sequences for multiple protein-coding genes are now commonly available from several, of-te...
Deleterious mutations affecting biological function of proteins are constantly being rejected by pur...
Deleterious mutations affecting biological function of proteins are constantly being rejected by pur...
In protein-coding genes, synonymous mutations are often thought not to affect fitness and therefore ...
First principles of population genetics are used to obtain formulae relating the non-synonymous to s...
24 pages, 4 figures and 1 table. Manuscript written between January and April 201024 pages, 4 figure...
<p>Based on these parameters, amounts of adaptive evolution and the strength of purifying selection ...
The rate of non-synonymous substitution (dS), rate of synonymous substitution (dN) and the ratio of ...
There are numerous sources of variation in the rate of synonymous substitutions inside genes, such a...
There are numerous sources of variation in the rate of synonymous substitutions inside genes, such a...
Codon substitution models have traditionally attempted to uncover signatures of adaptation within pr...
International audienceModern methods to detecting adaptive evolution from interspecific protein-codi...
Selection modulates gene sequence evolution in different ways by constraining potential changes of a...
Protein-coding sequences have long been assumed to evolve under selection, but the quantification of...
<p>The rate of non-synonymous substitutions (Ka), the rate of synonymous substitutions (Ks) and the ...
Abstract. Sequences for multiple protein-coding genes are now commonly available from several, of-te...
Deleterious mutations affecting biological function of proteins are constantly being rejected by pur...
Deleterious mutations affecting biological function of proteins are constantly being rejected by pur...
In protein-coding genes, synonymous mutations are often thought not to affect fitness and therefore ...