International audiencePredicting how a genetic change affects a given character is a major challenge in biology, and being able to tackle this problem relies on our ability to develop realistic models of gene networks. However, such models are rarely tractable mathematically. In this paper, we propose a mathematical analysis of the sigmoid variant of the Wagner gene-network model. By considering the simplest case, that is, one unique self-regulating gene, we show that numerical simulations are not the only tool available to study such models: theoretical studies can be done too, by mathematical analysis of discrete dynamical systems. It is first shown that the particular sigmoid function can be theoretically investigated. Secondly, we provi...
Abstract: This paper further introduces continuous optimization into the fields of computational bio...
The focus of the thesis is the investigation of the generalized repressilator model (repressing gene...
We propose a new method to explore the characteristics of genetic networks whose dynamics are descri...
International audiencePredicting how a genetic change affects a given character is a major challenge...
Motivation: Regulatory gene networks contain generic modules such as feedback loops that are essenti...
Gene regulatory networks control the response of living cells to changes in their environment. A cla...
International audienceGene regulatory networks control the response of living cells to changes in th...
We know that some proteins can regulate the expression of genes in a living organism. The regulation...
International audienceGene regulatory networks control the response of living cells to changes in th...
This is a short and self-contained introduction to the field of mathematical modeling of gene-networ...
International audienceTheoretical works have shed light on the impact of natural selection in shapin...
International audienceDifferentiation is the process whereby a cell acquires a specific phenotype, b...
This thesis presents the results of mathematical modeling of both individual genes and small network...
International audienceThis chapter describes basic principles for modeling genetic regulatory networ...
Motivation: Study of functioning laws of regulatory circuits of gene networks is one of the actual p...
Abstract: This paper further introduces continuous optimization into the fields of computational bio...
The focus of the thesis is the investigation of the generalized repressilator model (repressing gene...
We propose a new method to explore the characteristics of genetic networks whose dynamics are descri...
International audiencePredicting how a genetic change affects a given character is a major challenge...
Motivation: Regulatory gene networks contain generic modules such as feedback loops that are essenti...
Gene regulatory networks control the response of living cells to changes in their environment. A cla...
International audienceGene regulatory networks control the response of living cells to changes in th...
We know that some proteins can regulate the expression of genes in a living organism. The regulation...
International audienceGene regulatory networks control the response of living cells to changes in th...
This is a short and self-contained introduction to the field of mathematical modeling of gene-networ...
International audienceTheoretical works have shed light on the impact of natural selection in shapin...
International audienceDifferentiation is the process whereby a cell acquires a specific phenotype, b...
This thesis presents the results of mathematical modeling of both individual genes and small network...
International audienceThis chapter describes basic principles for modeling genetic regulatory networ...
Motivation: Study of functioning laws of regulatory circuits of gene networks is one of the actual p...
Abstract: This paper further introduces continuous optimization into the fields of computational bio...
The focus of the thesis is the investigation of the generalized repressilator model (repressing gene...
We propose a new method to explore the characteristics of genetic networks whose dynamics are descri...