International audienceThe recent release of genomic sequences for 3000 rice varieties provides access to the genetic diversity at species level for this crop. We take advantage of this resource to unravel some features of the retrotranspositional landscape of rice. We develop software TRACK-POSON specifically for the detection of transposable elements insertion polymorphisms (TIPs) from large datasets. We apply this tool to 32 families of retrotransposons and identify more than 50,000 TIPs in the 3000 rice genomes. Most polymorphisms are found at very low frequency, suggesting that they may have occurred recently in agro. A genome-wide association study shows that these activations in rice may be triggered by external stimuli, rather than b...
International audienceP>Transposable elements (TEs) are mobile entities that densely populate most e...
International audienceP>Transposable elements (TEs) are mobile entities that densely populate most e...
Abstract Background Extensive DNA rearrangement of genic colinearity, as revealed by comparison of o...
Retrotransposons are abundant in higher plant genomes. Although retrotransposons associated with pla...
BACKGROUND: Transposable elements (TEs) are prominent features in many plant genomes, and patterns o...
BACKGROUND: DNA (Class II) transposons are ubiquitous in plant genomes. However, unlike for (Class I...
BACKGROUND:Extensive DNA rearrangement of genic colinearity, as revealed by comparison of orthologou...
Abstract Background Transposab...
Transposable elements (TEs) are dynamic components of genomes that often vary in copy number among m...
Background: Extensive DNA rearrangement of genic colinearity, as revealed by comparison of orthologo...
Genomes of all characterized higher eukaryotes harbor examples of transposable element (TE) bursts-t...
Genomes of all characterized higher eukaryotes harbor examples of transposable element (TE) bursts-t...
Rice is one of the most important crop plants as well as a model organism used for genetic studies. ...
International audienceP>Transposable elements (TEs) are mobile entities that densely populate most e...
International audienceP>Transposable elements (TEs) are mobile entities that densely populate most e...
International audienceP>Transposable elements (TEs) are mobile entities that densely populate most e...
International audienceP>Transposable elements (TEs) are mobile entities that densely populate most e...
Abstract Background Extensive DNA rearrangement of genic colinearity, as revealed by comparison of o...
Retrotransposons are abundant in higher plant genomes. Although retrotransposons associated with pla...
BACKGROUND: Transposable elements (TEs) are prominent features in many plant genomes, and patterns o...
BACKGROUND: DNA (Class II) transposons are ubiquitous in plant genomes. However, unlike for (Class I...
BACKGROUND:Extensive DNA rearrangement of genic colinearity, as revealed by comparison of orthologou...
Abstract Background Transposab...
Transposable elements (TEs) are dynamic components of genomes that often vary in copy number among m...
Background: Extensive DNA rearrangement of genic colinearity, as revealed by comparison of orthologo...
Genomes of all characterized higher eukaryotes harbor examples of transposable element (TE) bursts-t...
Genomes of all characterized higher eukaryotes harbor examples of transposable element (TE) bursts-t...
Rice is one of the most important crop plants as well as a model organism used for genetic studies. ...
International audienceP>Transposable elements (TEs) are mobile entities that densely populate most e...
International audienceP>Transposable elements (TEs) are mobile entities that densely populate most e...
International audienceP>Transposable elements (TEs) are mobile entities that densely populate most e...
International audienceP>Transposable elements (TEs) are mobile entities that densely populate most e...
Abstract Background Extensive DNA rearrangement of genic colinearity, as revealed by comparison of o...