Add to ORKGA major challenge in practical DNA tile self-assembly is the minimization of errors. Using the kinetic Tile Assembly Model, a theoretical model of self-assembly, it has been shown that errors can be reduced through abstract tile set design. In this paper, we instead investigate the effects of “sticky end” sequence choices in systems using the kinetic model along with the nearest-neighbor model of DNA interactions. We show that both the sticky end sequences present in a system and their positions in the system can significantly affect error rates, and propose algorithms for sequence design and assignment
Molecular biology provides an inspiring proof-of-principle that chemical systems can store and proc...
DNA tile self-assembly has emerged as a rich and promising primitive for nano-technology. This pa-pe...
Abstract. DNA self-assembly is emerging as a key paradigm for nano-technology, nano-computation, and...
Bottom-up fabrication of nanoscale structures relies on chemical processes to direct self-assembly. ...
In this paper we report the design and synthesis of DNA molecules (referred to as DNA tiles) with ...
Algorithmic self-assembly using DNA-based molecular tiles has been demonstrated to implement molecu...
Copying and counting are useful primitive operations for computation and construction. We have made ...
Experimental demonstration of the Turing univer-sal tile based algorithmic DNA self-assembly has bee...
Algorithmic self-assembly, a generalization of crystal growth processes, has been proposed as a mech...
Algorithmic self-assembly, a generalization of crystal growth, has been proposed as a mechanism for ...
DNA nanotechnology has emerged as a reliable and programmable way of controlling matter at the nano...
Algorithmic self-assembly has been proposed as a mechanism for autonomous DNA computation and for bo...
Approaches to DNA-based computing by self-assembly require the use of D. T A nanostructures, called...
For robust molecular implementation of tile-based algorithmic self-assembly, methods for reducing e...
Algorithms and information, fundamental to technological and biological organization, are also an es...
Molecular biology provides an inspiring proof-of-principle that chemical systems can store and proc...
DNA tile self-assembly has emerged as a rich and promising primitive for nano-technology. This pa-pe...
Abstract. DNA self-assembly is emerging as a key paradigm for nano-technology, nano-computation, and...
Bottom-up fabrication of nanoscale structures relies on chemical processes to direct self-assembly. ...
In this paper we report the design and synthesis of DNA molecules (referred to as DNA tiles) with ...
Algorithmic self-assembly using DNA-based molecular tiles has been demonstrated to implement molecu...
Copying and counting are useful primitive operations for computation and construction. We have made ...
Experimental demonstration of the Turing univer-sal tile based algorithmic DNA self-assembly has bee...
Algorithmic self-assembly, a generalization of crystal growth processes, has been proposed as a mech...
Algorithmic self-assembly, a generalization of crystal growth, has been proposed as a mechanism for ...
DNA nanotechnology has emerged as a reliable and programmable way of controlling matter at the nano...
Algorithmic self-assembly has been proposed as a mechanism for autonomous DNA computation and for bo...
Approaches to DNA-based computing by self-assembly require the use of D. T A nanostructures, called...
For robust molecular implementation of tile-based algorithmic self-assembly, methods for reducing e...
Algorithms and information, fundamental to technological and biological organization, are also an es...
Molecular biology provides an inspiring proof-of-principle that chemical systems can store and proc...
DNA tile self-assembly has emerged as a rich and promising primitive for nano-technology. This pa-pe...
Abstract. DNA self-assembly is emerging as a key paradigm for nano-technology, nano-computation, and...