Obtaining a well supported schema of phylogenetic relationships among the major groups of living organisms requires considering as much taxonomic diversity as possible, but the computational cost of calculating large phylogenies has so far been a major obstacle. We show here that the parsimony algorithms implemented in TNT can successfully process the largest phylogenetic data set ever analysed, consisting of molecular sequences and morphology for 73 060 eukaryotic taxa. The trees resulting from molecules alone display a high degree of congruence with the major taxonomic groups, with a small proportion of misplaced species; the combined data set retrieves these groups with even higher congruence. This shows that tree-calculation algorithms ...
In this thesis, I use bioinformatic approaches to address new and existing issues surrounding large...
In this thesis, I use bioinformatic approaches to address new and existing issues surrounding large-...
Molecular phylogenetics has revolutionized our knowledge of the eukaryotic tree of life. With the ad...
Under the Alfred P. Sloan Fellowship in Computational Biology, I have been afforded the opportunity ...
Most eukaryotic lineages are microbial, and many have only recently been sampled for phylogenetic st...
An accurate reconstruction of the eukaryotic tree of life is essential to identify the innovations u...
Many disciplines in life sciences, directly or indirectly, utilize evolutionary relationships among ...
MOTIVATION: Phylogenomics integrates the vast amount of phylogenetic information contained in comple...
The amount of sequence data available to reconstruct the evolutionary history of genes and species h...
Phylogenetic analyses using genome-scale data sets must confront incongruence among gene trees, whic...
The Lophotrochozoa superphylum is amongst the largest in the animal kingdom, leading to many polaris...
Abstract.—An accurate reconstruction of the eukaryotic tree of life is essential to identify the inn...
MOTIVATION: Phylogenomics integrates the vast amount of phylogenetic information contained in comple...
We discuss here the use of TNT (Tree Analysis using New Technology) for phylogenomic analysis. For s...
We have developed a semi-automatic methodology to reconstruct the phylogenetic species tree in Proto...
In this thesis, I use bioinformatic approaches to address new and existing issues surrounding large...
In this thesis, I use bioinformatic approaches to address new and existing issues surrounding large-...
Molecular phylogenetics has revolutionized our knowledge of the eukaryotic tree of life. With the ad...
Under the Alfred P. Sloan Fellowship in Computational Biology, I have been afforded the opportunity ...
Most eukaryotic lineages are microbial, and many have only recently been sampled for phylogenetic st...
An accurate reconstruction of the eukaryotic tree of life is essential to identify the innovations u...
Many disciplines in life sciences, directly or indirectly, utilize evolutionary relationships among ...
MOTIVATION: Phylogenomics integrates the vast amount of phylogenetic information contained in comple...
The amount of sequence data available to reconstruct the evolutionary history of genes and species h...
Phylogenetic analyses using genome-scale data sets must confront incongruence among gene trees, whic...
The Lophotrochozoa superphylum is amongst the largest in the animal kingdom, leading to many polaris...
Abstract.—An accurate reconstruction of the eukaryotic tree of life is essential to identify the inn...
MOTIVATION: Phylogenomics integrates the vast amount of phylogenetic information contained in comple...
We discuss here the use of TNT (Tree Analysis using New Technology) for phylogenomic analysis. For s...
We have developed a semi-automatic methodology to reconstruct the phylogenetic species tree in Proto...
In this thesis, I use bioinformatic approaches to address new and existing issues surrounding large...
In this thesis, I use bioinformatic approaches to address new and existing issues surrounding large-...
Molecular phylogenetics has revolutionized our knowledge of the eukaryotic tree of life. With the ad...