Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain
- Perrin, Amandine
- Larsonneur, Elise
- Nicholson, Ainsley C.
- Edwards, David J.
- Gundlach, Kristin M.
- Whitney, Anne M.
- Gulvik, Christopher A.
- Bell, Melissa E.
- Rendueles, Olaya
- Cury, Jean
- Hugon, Perrine
- Clermont, Dominique
- Enouf, Vincent
- Loparev, Vladimir
- Juieng, Phalasy
- Monson, Timothy
- Warshauer, David
- Elbadawi, Lina I.
- Walters, Maroya Spalding
- Crist, Matthew B.
- Noble-Wang, Judith
- Borlaug, Gwen
- Rocha, Eduardo P. C.
- Criscuolo, Alexis
- Touchon, Marie
- Davis, Jeffrey P.
- Holt, Kathryn E.
- McQuiston, John R.
- Brisse, Sylvain
DOIAbstract
Supplementary files to a paper on evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain. The Excel files cover: Outbreak isolates and comparative strains included in the study, Single nucleotide polymorphisms (SNP) observed among outbreak isolates, Genomic features and annotations associated with the Wisconsin outbreak specific regions and deletion in 4 outbreak strains, Antimicrobial resistance features of the outbreak strain detected using ResFams, Virulence-associated features of the outbreak strain detected using the VFDB database, and Antimicrobial susceptibility values. The text file contain a SNP tree with node names. The XML files contain BEAST input file using cgMLST data...
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