Biologists doing high-throughput high-content cellular analysis are generally not computer scientists or high performance computing (HPC) experts, and they want their workflow to support their science without having to be. We describe a new HPC enabled data analytics workflow with a web interface, HPC pipeline for analysis, and both traditional and new analytics tools to help them transition from a single workstation mode of operation to power HPC users. This allows the processing of multiple plates over a short period of time to ensure timely query and analysis to match potential countermeasures to individual responses
Complex scientific questions at large scale user facilities strongly involve the user at eve...
Flow/Mass cytometry data analysis is essential in the study of diverse phenotypes and functions at t...
Optimizing scientific application performance in HPC environments is a complicated task which has mo...
Biologists doing high-throughput high-content cellular analysis are generally not computer scientist...
Ever since high-throughput DNA sequencing became economically feasible, the amount of biological dat...
BACKGROUND: To say data is revolutionising the medical sector would be a vast understatement. The am...
Next Generation Sequencing has brought genomic analysis within the range of a great number of labor...
To say data is revolutionising the medical sector would be a vast understatement. The amount of medi...
This deliverable presents the different approaches of the BioExcel CoE regarding the design and deve...
This work regards the use of high performance computing (HPC) methods for a new bioinformatics chall...
The growth of High Performance Computer (HPC) systems increases the complexity with respect to under...
A b s t r a c t The rapid advances in high-throughput biotechnologies such as DNA microarrays and ma...
In this work, system monitoring and analysis are discussed in terms of their sig- nificance and bene...
We live in a big-data era and simple serial bioinformatic pipelines can’t efficiently handle huge in...
Next generation sequencing (NGS) has been a great success and is now a standard meth-od of research ...
Complex scientific questions at large scale user facilities strongly involve the user at eve...
Flow/Mass cytometry data analysis is essential in the study of diverse phenotypes and functions at t...
Optimizing scientific application performance in HPC environments is a complicated task which has mo...
Biologists doing high-throughput high-content cellular analysis are generally not computer scientist...
Ever since high-throughput DNA sequencing became economically feasible, the amount of biological dat...
BACKGROUND: To say data is revolutionising the medical sector would be a vast understatement. The am...
Next Generation Sequencing has brought genomic analysis within the range of a great number of labor...
To say data is revolutionising the medical sector would be a vast understatement. The amount of medi...
This deliverable presents the different approaches of the BioExcel CoE regarding the design and deve...
This work regards the use of high performance computing (HPC) methods for a new bioinformatics chall...
The growth of High Performance Computer (HPC) systems increases the complexity with respect to under...
A b s t r a c t The rapid advances in high-throughput biotechnologies such as DNA microarrays and ma...
In this work, system monitoring and analysis are discussed in terms of their sig- nificance and bene...
We live in a big-data era and simple serial bioinformatic pipelines can’t efficiently handle huge in...
Next generation sequencing (NGS) has been a great success and is now a standard meth-od of research ...
Complex scientific questions at large scale user facilities strongly involve the user at eve...
Flow/Mass cytometry data analysis is essential in the study of diverse phenotypes and functions at t...
Optimizing scientific application performance in HPC environments is a complicated task which has mo...