Dynamic Dictionary Matching in External Memory

AbstractIn thedynamic dictionary matchingproblem, a dictionaryDcontains a set of patterns that can change over time under insertion and deletion of individual patterns. Given an arbitrary textT, we must efficiently list all the dictionary patterns that occur at each text position. We investigate the I/O complexity of this problem for a large dictionary that must be stored in external storage devices. By following a completely new approach, we devise an efficient solution which is based upon the SB-tree data structure (P. Ferragina and R. Grossi, 1995,in“Proc. ACM Symposium on Theory of Computing,” pp. 693–702), and a novel notion of certificate for the dictionary matching problem. Our data structure can be adapted to efficiently work in main memory and to solve other problems, thus providing a new insight into the nature of the dictionary matching problem