Additional file 6 of Changes in expression profiles of internal jugular vein wall and plasma protein levels in multiple sclerosis

Additional file 3: Figure S2. of Differential expression of glucose-metabolizing enzymes in multiple sclerosis lesions

Philip Nijland (3448439)
Remco Molenaar (3448442)
Susanne van der Pol (3448436)
Paul van der Valk (262947)
Cornelis van Noorden (3448445)
Helga de Vries (3448448)
Jack van Horssen (256421)

December 2015

The staining intensity of TCA cycle enzymes, PDH, αKGDH and MDH expression in inactive MS lesions co...

Additional file 6: of Unique RNA signature of different lesion types in the brain white matter in progressive multiple sclerosis

Maria Elkjaer (6637157)
Tobias Frisch (6637163)
Richard Reynolds (782370)
Tim Kacprowski (793348)
Mark Burton (489123)
Torben Kruse (849728)
Mads Thomassen (395200)
Jan Baumbach (14867)
Zsolt Illes (441094)

April 2019

Table S4. Differentially expressed genes related to oxidative stress, hypoxia and metabolic changes ...

Additional file 2: of Differential neuro-immune patterns in two clinically relevant murine models of multiple sclerosis

Krista DiSano (6727508)
Michael Linzey (6727511)
Darlene Royce (372501)
Andrew Pachner (6727514)
Francesca Gilli (253853)

May 2019

Table S2. Gene expression changes in R-EAE (E) and TMEV-IDD (T) versus their respective age-matched ...

Additional file 1 of Changes in expression profiles of internal jugular vein wall and plasma protein levels in multiple sclerosis

Giovanna Marchetti (3799957)
Nicole Ziliotto (5618657)
Silvia Meneghetti (5618660)
Marcello Baroni (5618663)
Barbara Lunghi (5618666)
Erica Menegatti (5618669)
Massimo Pedriali (563426)
Fabrizio Salvi (5618672)
Ilaria Bartolomei (5618675)
Sofia Straudi (3799960)
Fabio Manfredini (264205)
Rebecca Voltan (318772)
Nino Basaglia (3799963)
Francesco Mascoli (5618678)
Paolo Zamboni (318778)
Francesco Bernardi (84480)

August 2018

Table S1. Demographics and clinical characteristics of the 2nd study MS population. (DOCX 16 kb

Additional file 5 of Changes in expression profiles of internal jugular vein wall and plasma protein levels in multiple sclerosis

Giovanna Marchetti (3799957)
Nicole Ziliotto (5618657)
Silvia Meneghetti (5618660)
Marcello Baroni (5618663)
Barbara Lunghi (5618666)
Erica Menegatti (5618669)
Massimo Pedriali (563426)
Fabrizio Salvi (5618672)
Ilaria Bartolomei (5618675)
Sofia Straudi (3799960)
Fabio Manfredini (264205)
Rebecca Voltan (318772)
Nino Basaglia (3799963)
Francesco Mascoli (5618678)
Paolo Zamboni (318778)
Francesco Bernardi (84480)

August 2018

Table S5. List of genes, differentially expressed in MS jugular vein walls (MS-IJW) compared to cont...

Additional file 3 of Changes in expression profiles of internal jugular vein wall and plasma protein levels in multiple sclerosis

Giovanna Marchetti (3799957)
Nicole Ziliotto (5618657)
Silvia Meneghetti (5618660)
Marcello Baroni (5618663)
Barbara Lunghi (5618666)
Erica Menegatti (5618669)
Massimo Pedriali (563426)
Fabrizio Salvi (5618672)
Ilaria Bartolomei (5618675)
Sofia Straudi (3799960)
Fabio Manfredini (264205)
Rebecca Voltan (318772)
Nino Basaglia (3799963)
Francesco Mascoli (5618678)
Paolo Zamboni (318778)
Francesco Bernardi (84480)

August 2018

Table S3. List of 924 transcripts/genes differentially expressed (fold change > orâ=â2, Benjamin...

Changes in expression profiles of internal jugular vein wall and plasma protein levels in multiple sclerosis

Marchetti G.
Ziliotto N.
Meneghetti S.
Baroni M.
Lunghi B.
Menegatti E.
Pedriali M.
Salvi F.
Bartolomei I.
Straudi S.
Manfredini F.
Voltan R.
Basaglia N.
Mascoli F.
Zamboni P.
Bernardi F.

January 2018

Background: Multiple sclerosis (MS) is an inflammatory, demyelinating and degenerative disorder of t...

Additional file 2: of Aberrant STAT phosphorylation signaling in peripheral blood mononuclear cells from multiple sclerosis patients

Ester Canto (4920835)
Noriko Isobe (119848)
Alessandro Didonna (4920832)
Stephen Hauser (591884)
Jorge Oksenberg (488201)

March 2018

Table S1. Comparison of levels of phosphorylated proteins between MS patients and controls in baseli...

Additional file 4: of Aberrant STAT phosphorylation signaling in peripheral blood mononuclear cells from multiple sclerosis patients

Ester Canto (4920835)
Noriko Isobe (119848)
Alessandro Didonna (4920832)
Stephen Hauser (591884)
Jorge Oksenberg (488201)

March 2018

Table S3. Comparison of levels of phosphorylated proteins between MS patients and controls after in ...

Additional file 5: of Aberrant STAT phosphorylation signaling in peripheral blood mononuclear cells from multiple sclerosis patients

Ester Canto (4920835)
Noriko Isobe (119848)
Alessandro Didonna (4920832)
Stephen Hauser (591884)
Jorge Oksenberg (488201)

March 2018

Table S4. Comparison of levels of p38MAPK, Erk1/2, STAT1, and STAT6 between MS patients and controls...

Additional file 3: of Aberrant STAT phosphorylation signaling in peripheral blood mononuclear cells from multiple sclerosis patients

Ester Canto (4920835)
Noriko Isobe (119848)
Alessandro Didonna (4920832)
Stephen Hauser (591884)
Jorge Oksenberg (488201)

March 2018

Table S2. Comparison of fold change of protein phosphorylation between MS patients and controls afte...

MOESM1 of Quantitative proteomic analyses of CD4+ and CD8+ T cells reveal differentially expressed proteins in multiple sclerosis patients and healthy controls

Tone Berge (301374)
Anna Eriksson (176834)
Ina Brorson (6683087)
Einar Høgestøl (6683093)
Pål Berg-Hansen (385615)
Anne Døskeland (6683096)
Olav Mjaavatten (3465629)
Steffan Bos (3505187)
Hanne Harbo (3505193)
Frode Berven (2007676)

May 2019

Additional file 1: Table S1. Proteins from CD4+ T cells differentially expressed in MS patients and ...

MOESM2 of Quantitative proteomic analyses of CD4+ and CD8+ T cells reveal differentially expressed proteins in multiple sclerosis patients and healthy controls

Tone Berge (301374)
Anna Eriksson (176834)
Ina Brorson (6683087)
Einar Høgestøl (6683093)
Pål Berg-Hansen (385615)
Anne Døskeland (6683096)
Olav Mjaavatten (3465629)
Steffan Bos (3505187)
Hanne Harbo (3505193)
Frode Berven (2007676)

May 2019

Additional file 2: Table S2. Proteins from CD8+ T cells differentially expressed in MS patients and ...

Changes in expression profiles of internal jugular vein wall and plasma protein levels in multiple sclerosis.

Marchetti, G
Ziliotto, N
Meneghetti, S
Baroni, M
Lunghi, B
Menegatti, E
Pedriali, M
Salvi, F
Bartolomei, I
Straudi, S
Manfredini, F
Voltan, R
Basaglia, N
Mascoli, F
Zamboni, P
Bernardi, F.

January 2018

BACKGROUND: Multiple sclerosis (MS) is an inflammatory, demyelinating and degenerative disorder of ...

Additional file 1: of Unique RNA signature of different lesion types in the brain white matter in progressive multiple sclerosis

Maria Elkjaer (6637157)
Tobias Frisch (6637163)
Richard Reynolds (782370)
Tim Kacprowski (793348)
Mark Burton (489123)
Torben Kruse (849728)
Mads Thomassen (395200)
Jan Baumbach (14867)
Zsolt Illes (441094)

April 2019

Table S1. Clinical and demographic data of the MS patients and non-neurological disease controls (PD...

Additional file 3: Figure S2. of Differential expression of glucose-metabolizing enzymes in multiple sclerosis lesions

Philip Nijland (3448439)
Remco Molenaar (3448442)
Susanne van der Pol (3448436)
Paul van der Valk (262947)
Cornelis van Noorden (3448445)
Helga de Vries (3448448)
Jack van Horssen (256421)

December 2015

The staining intensity of TCA cycle enzymes, PDH, αKGDH and MDH expression in inactive MS lesions co...

Additional file 6: of Unique RNA signature of different lesion types in the brain white matter in progressive multiple sclerosis

Maria Elkjaer (6637157)
Tobias Frisch (6637163)
Richard Reynolds (782370)
Tim Kacprowski (793348)
Mark Burton (489123)
Torben Kruse (849728)
Mads Thomassen (395200)
Jan Baumbach (14867)
Zsolt Illes (441094)

April 2019

Table S4. Differentially expressed genes related to oxidative stress, hypoxia and metabolic changes ...

Additional file 2: of Differential neuro-immune patterns in two clinically relevant murine models of multiple sclerosis

Krista DiSano (6727508)
Michael Linzey (6727511)
Darlene Royce (372501)
Andrew Pachner (6727514)
Francesca Gilli (253853)

May 2019

Table S2. Gene expression changes in R-EAE (E) and TMEV-IDD (T) versus their respective age-matched ...

Additional file 1 of Changes in expression profiles of internal jugular vein wall and plasma protein levels in multiple sclerosis

Giovanna Marchetti (3799957)
Nicole Ziliotto (5618657)
Silvia Meneghetti (5618660)
Marcello Baroni (5618663)
Barbara Lunghi (5618666)
Erica Menegatti (5618669)
Massimo Pedriali (563426)
Fabrizio Salvi (5618672)
Ilaria Bartolomei (5618675)
Sofia Straudi (3799960)
Fabio Manfredini (264205)
Rebecca Voltan (318772)
Nino Basaglia (3799963)
Francesco Mascoli (5618678)
Paolo Zamboni (318778)
Francesco Bernardi (84480)

August 2018

Table S1. Demographics and clinical characteristics of the 2nd study MS population. (DOCX 16 kb

Additional file 5 of Changes in expression profiles of internal jugular vein wall and plasma protein levels in multiple sclerosis

Giovanna Marchetti (3799957)
Nicole Ziliotto (5618657)
Silvia Meneghetti (5618660)
Marcello Baroni (5618663)
Barbara Lunghi (5618666)
Erica Menegatti (5618669)
Massimo Pedriali (563426)
Fabrizio Salvi (5618672)
Ilaria Bartolomei (5618675)
Sofia Straudi (3799960)
Fabio Manfredini (264205)
Rebecca Voltan (318772)
Nino Basaglia (3799963)
Francesco Mascoli (5618678)
Paolo Zamboni (318778)
Francesco Bernardi (84480)

August 2018

Table S5. List of genes, differentially expressed in MS jugular vein walls (MS-IJW) compared to cont...

Additional file 3 of Changes in expression profiles of internal jugular vein wall and plasma protein levels in multiple sclerosis

Giovanna Marchetti (3799957)
Nicole Ziliotto (5618657)
Silvia Meneghetti (5618660)
Marcello Baroni (5618663)
Barbara Lunghi (5618666)
Erica Menegatti (5618669)
Massimo Pedriali (563426)
Fabrizio Salvi (5618672)
Ilaria Bartolomei (5618675)
Sofia Straudi (3799960)
Fabio Manfredini (264205)
Rebecca Voltan (318772)
Nino Basaglia (3799963)
Francesco Mascoli (5618678)
Paolo Zamboni (318778)
Francesco Bernardi (84480)

August 2018

Table S3. List of 924 transcripts/genes differentially expressed (fold change > orâ=â2, Benjamin...

Changes in expression profiles of internal jugular vein wall and plasma protein levels in multiple sclerosis

Marchetti G.
Ziliotto N.
Meneghetti S.
Baroni M.
Lunghi B.
Menegatti E.
Pedriali M.
Salvi F.
Bartolomei I.
Straudi S.
Manfredini F.
Voltan R.
Basaglia N.
Mascoli F.
Zamboni P.
Bernardi F.

January 2018

Background: Multiple sclerosis (MS) is an inflammatory, demyelinating and degenerative disorder of t...

Additional file 2: of Aberrant STAT phosphorylation signaling in peripheral blood mononuclear cells from multiple sclerosis patients

Ester Canto (4920835)
Noriko Isobe (119848)
Alessandro Didonna (4920832)
Stephen Hauser (591884)
Jorge Oksenberg (488201)

March 2018

Table S1. Comparison of levels of phosphorylated proteins between MS patients and controls in baseli...

Additional file 4: of Aberrant STAT phosphorylation signaling in peripheral blood mononuclear cells from multiple sclerosis patients

Ester Canto (4920835)
Noriko Isobe (119848)
Alessandro Didonna (4920832)
Stephen Hauser (591884)
Jorge Oksenberg (488201)

March 2018

Table S3. Comparison of levels of phosphorylated proteins between MS patients and controls after in ...

Additional file 5: of Aberrant STAT phosphorylation signaling in peripheral blood mononuclear cells from multiple sclerosis patients

Ester Canto (4920835)
Noriko Isobe (119848)
Alessandro Didonna (4920832)
Stephen Hauser (591884)
Jorge Oksenberg (488201)

March 2018

Table S4. Comparison of levels of p38MAPK, Erk1/2, STAT1, and STAT6 between MS patients and controls...

Additional file 3: of Aberrant STAT phosphorylation signaling in peripheral blood mononuclear cells from multiple sclerosis patients

Ester Canto (4920835)
Noriko Isobe (119848)
Alessandro Didonna (4920832)
Stephen Hauser (591884)
Jorge Oksenberg (488201)

March 2018

Table S2. Comparison of fold change of protein phosphorylation between MS patients and controls afte...

MOESM1 of Quantitative proteomic analyses of CD4+ and CD8+ T cells reveal differentially expressed proteins in multiple sclerosis patients and healthy controls

Tone Berge (301374)
Anna Eriksson (176834)
Ina Brorson (6683087)
Einar Høgestøl (6683093)
Pål Berg-Hansen (385615)
Anne Døskeland (6683096)
Olav Mjaavatten (3465629)
Steffan Bos (3505187)
Hanne Harbo (3505193)
Frode Berven (2007676)

May 2019

Additional file 1: Table S1. Proteins from CD4+ T cells differentially expressed in MS patients and ...

MOESM2 of Quantitative proteomic analyses of CD4+ and CD8+ T cells reveal differentially expressed proteins in multiple sclerosis patients and healthy controls

Tone Berge (301374)
Anna Eriksson (176834)
Ina Brorson (6683087)
Einar Høgestøl (6683093)
Pål Berg-Hansen (385615)
Anne Døskeland (6683096)
Olav Mjaavatten (3465629)
Steffan Bos (3505187)
Hanne Harbo (3505193)
Frode Berven (2007676)

May 2019

Additional file 2: Table S2. Proteins from CD8+ T cells differentially expressed in MS patients and ...

Changes in expression profiles of internal jugular vein wall and plasma protein levels in multiple sclerosis.

Marchetti, G
Ziliotto, N
Meneghetti, S
Baroni, M
Lunghi, B
Menegatti, E
Pedriali, M
Salvi, F
Bartolomei, I
Straudi, S
Manfredini, F
Voltan, R
Basaglia, N
Mascoli, F
Zamboni, P
Bernardi, F.

January 2018

BACKGROUND: Multiple sclerosis (MS) is an inflammatory, demyelinating and degenerative disorder of ...

Additional file 1: of Unique RNA signature of different lesion types in the brain white matter in progressive multiple sclerosis

Maria Elkjaer (6637157)
Tobias Frisch (6637163)
Richard Reynolds (782370)
Tim Kacprowski (793348)
Mark Burton (489123)
Torben Kruse (849728)
Mads Thomassen (395200)
Jan Baumbach (14867)
Zsolt Illes (441094)

April 2019

Table S1. Clinical and demographic data of the MS patients and non-neurological disease controls (PD...

Additional file 3: Figure S2. of Differential expression of glucose-metabolizing enzymes in multiple sclerosis lesions

Philip Nijland (3448439)
Remco Molenaar (3448442)
Susanne van der Pol (3448436)
Paul van der Valk (262947)
Cornelis van Noorden (3448445)
Helga de Vries (3448448)
Jack van Horssen (256421)

December 2015

The staining intensity of TCA cycle enzymes, PDH, αKGDH and MDH expression in inactive MS lesions co...

Additional file 6: of Unique RNA signature of different lesion types in the brain white matter in progressive multiple sclerosis

Maria Elkjaer (6637157)
Tobias Frisch (6637163)
Richard Reynolds (782370)
Tim Kacprowski (793348)
Mark Burton (489123)
Torben Kruse (849728)
Mads Thomassen (395200)
Jan Baumbach (14867)
Zsolt Illes (441094)

April 2019

Table S4. Differentially expressed genes related to oxidative stress, hypoxia and metabolic changes ...

Additional file 2: of Differential neuro-immune patterns in two clinically relevant murine models of multiple sclerosis

Krista DiSano (6727508)
Michael Linzey (6727511)
Darlene Royce (372501)
Andrew Pachner (6727514)
Francesca Gilli (253853)

May 2019

Table S2. Gene expression changes in R-EAE (E) and TMEV-IDD (T) versus their respective age-matched ...

Additional file 6 of Changes in expression profiles of internal jugular vein wall and plasma protein levels in multiple sclerosis

Abstract

Extracted data

Additional file 6 of Changes in expression profiles of internal jugular vein wall and plasma protein levels in multiple sclerosis

Abstract

Extracted data

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