Table S1. The distribution of SNPs and average distances between neighboring SNPs. (DOCX 17 kb
The phenotypic distributions of the four different genotype classes for the most significant AA effe...
Manhattan plot of the posterior means of the proportion of genetic variance explained by each 1-Mb S...
Manhattan plot of the SNP effect distribution within each significant window for skin weight (SKINW)...
Figure S1. SNP density and distribution across the genome (after quality control). (TIF 2605 kb
Table S3. Differences in measures of homozygosity between individuals among 9 sub-populations in thr...
Table S2. Genetic differentiation (FST values) among the 9 sub-populations in three chicken breeds. ...
Lists of information containing all the positively selected genes in chicken breeds. (XLSX 1018 kb
Table S1. Population information, population diversity measures and origin of DNA samples. (DOCX 88 ...
A figure with the substitution types of SNPs initially identified from the 28 chickens (broiler and ...
Summary of genome-wide significant SNPs with respect to nine egg weights by univariate GWAS. Table S...
Plot of the density of SNPs per Mbp in each autosomal chromosome after filtration. (DOCX 155 kb
Table S1. A pedigree-based genetic relationship matrix among the 24 key individuals. Table S2 A summ...
Manhattan plot of the posterior means of the proportion of genetic variance explained by each 1-Mb S...
Table S1. Basic information for SNP markers per chromosome after quality control. (DOCX 29 kb
Manhattan plot of the SNP effect distribution within each significant window for skin percentage (SK...
The phenotypic distributions of the four different genotype classes for the most significant AA effe...
Manhattan plot of the posterior means of the proportion of genetic variance explained by each 1-Mb S...
Manhattan plot of the SNP effect distribution within each significant window for skin weight (SKINW)...
Figure S1. SNP density and distribution across the genome (after quality control). (TIF 2605 kb
Table S3. Differences in measures of homozygosity between individuals among 9 sub-populations in thr...
Table S2. Genetic differentiation (FST values) among the 9 sub-populations in three chicken breeds. ...
Lists of information containing all the positively selected genes in chicken breeds. (XLSX 1018 kb
Table S1. Population information, population diversity measures and origin of DNA samples. (DOCX 88 ...
A figure with the substitution types of SNPs initially identified from the 28 chickens (broiler and ...
Summary of genome-wide significant SNPs with respect to nine egg weights by univariate GWAS. Table S...
Plot of the density of SNPs per Mbp in each autosomal chromosome after filtration. (DOCX 155 kb
Table S1. A pedigree-based genetic relationship matrix among the 24 key individuals. Table S2 A summ...
Manhattan plot of the posterior means of the proportion of genetic variance explained by each 1-Mb S...
Table S1. Basic information for SNP markers per chromosome after quality control. (DOCX 29 kb
Manhattan plot of the SNP effect distribution within each significant window for skin percentage (SK...
The phenotypic distributions of the four different genotype classes for the most significant AA effe...
Manhattan plot of the posterior means of the proportion of genetic variance explained by each 1-Mb S...
Manhattan plot of the SNP effect distribution within each significant window for skin weight (SKINW)...
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