The table provides an overview of miRNA sponge candidates that have at least 10 binding sites more than what is required for statistical significance, can be annotated with known genes, and have more than 9% of predicted miRNA binding sites within exons. The column cluster size lists the number of binding sites in the given cluster for real genome and the cluster size cutoff for statistical significance obtained from shuffling. The sponge candidates are sorted based on the difference between these two cluster sizes.</p
MicroRNA (miRNA) binding is primarily based on sequence, but structure-specific binding is also poss...
Background: Current miRNA target prediction tools have the common problem that their false positive ...
Background: Current miRNA target prediction tools have the common problem that their false positive ...
The number of discovered natural miRNA sponges in plants, viruses, and mammals is increasing steadil...
The number of discovered natural miRNA sponges in plants, viruses, and mammals is increasing steadil...
To illustrate the web resource, we show the results for miR-7. (A) When searching for a miRNA, the u...
Non-coding RNA transcripts such as microRNAs (miRNAs) and long non-coding RNAs (lncRNAs) are importa...
The plot shows the size distributions obtained for real and shuffled genomes when pooling the result...
For each mature miRNA in miRBase v20, we ran RIsearch2 against both the real repeat-masked genome an...
<p>List of miRNAs with positive selection (accumulation of binding sites) among 40 highly eIF4E upre...
<p>(a) Potential canonical binding site accepted by the PITA, TargetScan (TS), and miRAW CSSMs. Here...
MicroRNA (miRNA) sponges are transcripts with repeated miRNA antisense sequences that can sequester ...
MicroRNA (miRNA) sponges are transcripts with repeated miRNA antisense sequences that can sequester ...
<p>A random samples of 50 probes upregulated on PAA (FC > 2) was compared to 50 probes highly downre...
Non-coding RNA transcripts such as microRNAs (miRNAs) and long non-coding RNAs (lncRNAs) are importa...
MicroRNA (miRNA) binding is primarily based on sequence, but structure-specific binding is also poss...
Background: Current miRNA target prediction tools have the common problem that their false positive ...
Background: Current miRNA target prediction tools have the common problem that their false positive ...
The number of discovered natural miRNA sponges in plants, viruses, and mammals is increasing steadil...
The number of discovered natural miRNA sponges in plants, viruses, and mammals is increasing steadil...
To illustrate the web resource, we show the results for miR-7. (A) When searching for a miRNA, the u...
Non-coding RNA transcripts such as microRNAs (miRNAs) and long non-coding RNAs (lncRNAs) are importa...
The plot shows the size distributions obtained for real and shuffled genomes when pooling the result...
For each mature miRNA in miRBase v20, we ran RIsearch2 against both the real repeat-masked genome an...
<p>List of miRNAs with positive selection (accumulation of binding sites) among 40 highly eIF4E upre...
<p>(a) Potential canonical binding site accepted by the PITA, TargetScan (TS), and miRAW CSSMs. Here...
MicroRNA (miRNA) sponges are transcripts with repeated miRNA antisense sequences that can sequester ...
MicroRNA (miRNA) sponges are transcripts with repeated miRNA antisense sequences that can sequester ...
<p>A random samples of 50 probes upregulated on PAA (FC > 2) was compared to 50 probes highly downre...
Non-coding RNA transcripts such as microRNAs (miRNAs) and long non-coding RNAs (lncRNAs) are importa...
MicroRNA (miRNA) binding is primarily based on sequence, but structure-specific binding is also poss...
Background: Current miRNA target prediction tools have the common problem that their false positive ...
Background: Current miRNA target prediction tools have the common problem that their false positive ...