Dominant functional categories (rows) enriched in the large list of 5602 genes (columns) having increased transcript levels in tumors in any one of the three genera–mouse, rat, and human from among 19169 annotated genes. 274 populated GO sets showed enrichment in the union of gene lists at p −5; a subset of these covering the union with low redundancy is shown in the Figure. Shaded area in each row counts the number of tumor-associated genes having that functional property; categories are ordered from the top by decreasing numbers of tumor-associated genes not contained in a prior category. Colors indicate the genus in which the transcript level is enhanced in adenomas.</p
1<p>The data in this table was generated by GOrilla <a href="http://www.plosone.org/article/info:doi...
1<p>− hazard genes: number of genes that have a negative association between the hazard of ovarian c...
. mice. animals found 363 transcripts whose expression changed at least 1.5-fold (P<0.01). Functiona...
Functional categories (rows) enriched in the large list of 5477 genes (columns) having decreased tra...
Functional categories (rows) enriched in the75 genes (columns) having increased transcript levels in...
The sets of genes with differential transcript levels between colonic adenomas and normal colonic ep...
<div><p>A) Clonally expanded gene insertions in tumor samples, sorted by their average read frequenc...
<p>Statistically significant GSEA gene sets were subjected to leading edge analysis (LEA) and the re...
<p>Genes that are known to be associated with cancer (black) and all remaining genes (gray) were gro...
Top representative GO (biological processes) terms based on REVIGO output, enriched among (A) all th...
GSEA enrichment plots for the (A) five TRM-related up-regulated and (B) five TRM-related down-regula...
Gene set enrichment analysis of SRP016568. The file contains an XLSX spreadsheet summarizing the top...
Background: The NCI-60 is a panel of 60 diverse human cancer cell lines used by the U.S. National Ca...
a<p>The number of genes mapped to each GO term in the whole MED transcriptome.</p>b<p>The number of ...
<p>List of the top 5 biological functions and the top 5 canonical pathways found as statistically ov...
1<p>The data in this table was generated by GOrilla <a href="http://www.plosone.org/article/info:doi...
1<p>− hazard genes: number of genes that have a negative association between the hazard of ovarian c...
. mice. animals found 363 transcripts whose expression changed at least 1.5-fold (P<0.01). Functiona...
Functional categories (rows) enriched in the large list of 5477 genes (columns) having decreased tra...
Functional categories (rows) enriched in the75 genes (columns) having increased transcript levels in...
The sets of genes with differential transcript levels between colonic adenomas and normal colonic ep...
<div><p>A) Clonally expanded gene insertions in tumor samples, sorted by their average read frequenc...
<p>Statistically significant GSEA gene sets were subjected to leading edge analysis (LEA) and the re...
<p>Genes that are known to be associated with cancer (black) and all remaining genes (gray) were gro...
Top representative GO (biological processes) terms based on REVIGO output, enriched among (A) all th...
GSEA enrichment plots for the (A) five TRM-related up-regulated and (B) five TRM-related down-regula...
Gene set enrichment analysis of SRP016568. The file contains an XLSX spreadsheet summarizing the top...
Background: The NCI-60 is a panel of 60 diverse human cancer cell lines used by the U.S. National Ca...
a<p>The number of genes mapped to each GO term in the whole MED transcriptome.</p>b<p>The number of ...
<p>List of the top 5 biological functions and the top 5 canonical pathways found as statistically ov...
1<p>The data in this table was generated by GOrilla <a href="http://www.plosone.org/article/info:doi...
1<p>− hazard genes: number of genes that have a negative association between the hazard of ovarian c...
. mice. animals found 363 transcripts whose expression changed at least 1.5-fold (P<0.01). Functiona...