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Cluster of KEGG Orthologue database annotations of assembled unigenes.

Daizhen Zhang (5728403)
Jun Liu (42548)
Tingting Qi (710630)
Baoming Ge (5728406)
Qiuning Liu (5728409)
Senhao Jiang (5728412)
Huabin Zhang (798548)
Zhengfei Wang (303878)
Ge Ding (5728415)
Boping Tang (322718)

Publication date

September 2018

DOI

10.1371/journal.pone.0203280.g003

Publisher

Public Library of Science (PLoS)

Abstract

A: Cellular Processes; B: Environmental Information Processing; C: Genetic Information Processing; D: Metabolism; E: Organismal Systems.</p

Extracted data

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Classifications of transcripts according to the matching KEGG pathway; A, B, C, D, and E represent five main categories: cellular processes, environmental information processing, genetic information processing, metabolism, and organismal systems, respectively.

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KEGG orthology (KO) classification of assembled unigenes.

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Histogram of KEGG classification of unigenes.

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Classification map of KEGG metabolic pathway.

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<p>A total of 13,663 unigenes were assigned to 241 KEGG pathways belonging to six categories. (A) Th...

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<p>(<b>A</b>) COG function classification of unigenes shows 26 different functional groups. (<b>B</b...

Classifications of transcripts according to the matching KEGG pathway; A, B, C, D, and E represent five main categories: cellular processes, environmental information processing, genetic information processing, metabolism, and organismal systems, respectively.

Xia Zheng (384416)
Shouwei Tang (397331)
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Touming Liu (397325)

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<p>Classifications of transcripts according to the matching KEGG pathway; A, B, C, D, and E represen...

Pathway assignment based on the KEGG database.

Ying Wang (11406)
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Pathway assignment based on Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis.

Xin-jie Tian (764304)
Yan Long (118326)
Jiao Wang (47178)
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Wei-min Li (5664289)
Yu-fa Peng (5664292)
Qian-hua Yuan (764306)
Xin-wu Pei (764307)

July 2015

<p>Classification based on the (A) cellular processes categories, (B) environmental information proc...

KEGG annotation of putative proteins.

Lei Gao (6566)
Chongbo He (31990)
Xiangbo Bao (4252942)
Meilin Tian (178807)
Zhen Ma (281909)

July 2017

<p>A, Cellular Processes; B, Enviromental Information Processing; C, Genetic Information Processing;...

KEGG orthology (KO) classification of assembled unigenes.

Yong Long (138508)
Qing Li (84975)
Bolan Zhou (378525)
Guili Song (138501)
Tao Li (86810)
Zongbin Cui (138513)

February 2013

<p>KO functional annotation was performed using KEGG Automatic Annotation Server (KAAS). The sequenc...

KEGG pathway annotation of the unigenes.

Xiaoxiang Xu (1446412)
Zhongping Yin (2902421)
Jiguang Chen (2902420)
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Dayong Peng (2902423)
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Histogram of KEGG classification of unigenes.

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Ting Su (640554)
Wei Yang (109917)
Chunping Yang (691885)
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June 2017

<p><b>a</b> Cellular Processes. <b>b</b> Environmental Information Processing. <b>c</b> Genetic Info...

Classification map of KEGG metabolic pathway.

Dian-Yun Hou (4860370)
Lin-Chun Shi (4860367)
Meng-Meng Yang (4860361)
Jiong Li (244631)
Shuang Zhou (339964)
Hong-Xiao Zhang (4860364)
Hua-Wei Xu (4860358)

February 2018

<p>A: Metabolism, B: Genetic information processing, C: Environmental information processing, D: Cel...

KEGG classification.

Xiaoyun Huang (659874)
Xiaonan Zang (3704794)
Fei Wu (117860)
Yuming Jin (3704809)
Haitao Wang (165102)
Chang Liu (35901)
Yating Ding (3704800)
Bangxiang He (3704806)
Dongfang Xiao (3704797)
Xinwei Song (3704803)
Zhu Liu (646037)

January 2017

<p>Y-axis lists the various metabolic pathways, while the x-axis gives the percent of genes in the p...

Summary of KEGG annotation of unigenes.

Li Xu (108702)
Jiabin Wang (597432)
Ming Lei (161082)
Li Li (14993)
Yunliu Fu (3144369)
Zhunian Wang (627369)
Mengfei Ao (3144366)
Zhiying Li (703571)

August 2016

<p>(A) Number of unigenes involved in sub-pathways of carbohydrate metabolism. (B) Number of unigene...

KEGG (Kyoto Encyclopedia of Genes and Genomes) assignment of unigenes in the mantle transcriptome of <i>P. yessoensis</i>.

Xiujun Sun (719775)
Aiguo Yang (719776)
Biao Wu (523665)
Liqing Zhou (416094)
Zhihong Liu (112690)

April 2015

<p>A, Cellular Processes; B, Enviromental Information Processing; C, Genetic Information Processing;...

KEGG classification of the unigenes from RNA-Seq experiments on <i>D</i>. <i>composita</i>.

Xia Wang (36364)
Dijia Chen (720664)
Yuqi Wang (270190)
Jun Xie (53987)

April 2015

<p>Key: A–cellular processes, B–environmental information processing, C–genetic information processi...

Categorization of unigenes into KEGG biochemical pathways.

Guoyan Liu (563480)
Yonghong Zhou (42434)
Dan Liu (108669)
Qianqian Wang (494839)
Zengliang Ruan (563479)
Qian He (248656)
Liming Zhang (213971)

November 2015

<p>A total of 13,663 unigenes were assigned to 241 KEGG pathways belonging to six categories. (A) Th...

KEGG as a reference resource for gene and protein annotation

Kanehisa, Minoru
Sato, Yoko
Kawashima, Masayuki
Furumichi, Miho
Tanabe, Mao

January 2016

KEGG (http://www.kegg.jp/ or http://www.genome.jp/kegg/) is an integrated database resource for biol...

COG and KEGG function classification of unigenes.

Guodong Rao (638504)
Jinkai Sui (638505)
Yanfei Zeng (613767)
Caiyun He (525203)
Aiguo Duan (487900)
Jianguo Zhang (6482)

October 2014

<p>(<b>A</b>) COG function classification of unigenes shows 26 different functional groups. (<b>B</b...

Classifications of transcripts according to the matching KEGG pathway; A, B, C, D, and E represent five main categories: cellular processes, environmental information processing, genetic information processing, metabolism, and organismal systems, respectively.

Xia Zheng (384416)
Shouwei Tang (397331)
Siyuan Zhu (397326)
Qiuzhong Dai (3164289)
Touming Liu (397325)

June 2016

<p>Classifications of transcripts according to the matching KEGG pathway; A, B, C, D, and E represen...

Pathway assignment based on the KEGG database.

Ying Wang (11406)
Jia-tong Ding (830133)
Hai-ming Yang (830134)
Zheng-jie Yan (830135)
Wei Cao (50866)
Yang-bai Li (830136)

November 2015

<p>Classification based on (A) organismal system categories, (B) metabolism categories, (C) genetic ...

Pathway assignment based on Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis.

Xin-jie Tian (764304)
Yan Long (118326)
Jiao Wang (47178)
Jing-wen Zhang (764305)
Yan-yan Wang (333583)
Wei-min Li (5664289)
Yu-fa Peng (5664292)
Qian-hua Yuan (764306)
Xin-wu Pei (764307)

July 2015

<p>Classification based on the (A) cellular processes categories, (B) environmental information proc...