Additional file 3: of Comparative genome analyses reveal sequence features reflecting distinct modes of host-adaptation between dicot and monocot powdery mildew

Table S13. Mapping of RNA-seq reads to two PM genomes. Table S14. Percentages of PM genes expressed in mycelia and/or haustoria. Table S15. Functional enrichment of the differentially expressed genes in Oidium neolycopersici UMSG2. Table S16. Functional enrichment of the differentially expressed genes in Golovinomyces cichoracearum UMSG3. Table S17. Orthologous genes up-regulated between any two of the three PM biotypes examined. Table S18. Orthologus genes Up-regulated in haustoria in both OnM2 and GcM3. Table S19. Orthologus genes Up-regulated in haustoria in both GcC1 and GcM3. Table S20. Total number and percentage of predicted partial genes that are expressed. Table S21. A comparison of powdery mildew interaction with dicot and monocot hosts. Table S22. Composition of genes defining the secretome in eight PM genomes. Table S23. Predicted powdery mildew genes encoding proteins with a YxC motifa in eight PM genomes. Table S24. Ka/Ks ratios of CSEP gene clusters from seven PM biotypes. Table S25. High-level expression of six G. cichoracearum UCSC1-specific CSEP genes in haustoria. Table S26. CSEP genes of Gc UCSC1 and Gc UMSG3 that show induced expression in haustoria. Table S27. Shared CSEP genes among Gc UCSC1, Gc UMSG3 and Gc UMSG1 that show induced expression in haustoria of Gc UCSC1 and Gc UMSG3. Table S28. O. neolycopersici UMSG2-specific CSEP genes that are induced in haustoria. Table S29. BUSCO completeness assessment of the protein set for each PM biotype. (XLSX 234 kb