(A) Within the MWC model, cAMP (purple circles) may bind to a CRP subunit in either the active (dark green) or inactive (light green) state. and represent the dissociation constants of the left subunit in the active and inactive states, respectively, while and represent the analogous dissociation constants for the right subunit. [M] denotes the concentration of cAMP and ϵ represents the free energy difference between each subunit’s inactive and active states with . and represent a cooperative energy when two cAMP are bound to CRP in the active and inactive states, respectively. (B) The KNF model assumes that the two CRP subunits are inactive when unbound to cAMP and transition to the active state immediately upon binding to cAMP. The ...
(a) The relations among PRR, ΔGi and CR for the MWC model with two states, plotted according to Eqs ...
The MM-GBSA binding free energies (kcal/mol) of three different VDR and CYP24A1 models.</p
Allosteric transcription factors undergo binding events at inducer binding sites as well as at disti...
The data in Fig 3 can be characterized using a single set of dissociation constants for the WT, D, a...
(A) Within the MWC and KNF models, each CRP subunit can assume either an active or an inactive confo...
In addition to the wild type CRP subunit (denoted WT), the mutation D53H (denoted D) and the mutatio...
Binding of RNAP (blue) to a promoter is facilitated by the binding of the activator CRP. Simultaneou...
The DNA unbound states from Fig 2 are shown together with the DNA bound states. The Boltzmann weight...
<p>Ensemble of structures (dynamic states) are selected according to their dynamic behavior among th...
Protein Kinase A (PKA) is the major receptor for the cyclic adenosine monophosphate (cAMP) secondary...
<p>A summary of the dissociation constants (Kd) of WT CRD-BP in comparison with its KH variants for ...
<p><b>(A)</b> “Double Conformational Selection” Model proposed for PKA-RIα activation. The inactive ...
Allosteric transcription factors undergo binding events at inducer binding sites as well as at disti...
(a) The MWC model for hemoglobin [3]. All four subunits are simultaneously in either an R (Relaxed) ...
Allosteric transcription factors undergo binding events both at their operator binding sites as well...
(a) The relations among PRR, ΔGi and CR for the MWC model with two states, plotted according to Eqs ...
The MM-GBSA binding free energies (kcal/mol) of three different VDR and CYP24A1 models.</p
Allosteric transcription factors undergo binding events at inducer binding sites as well as at disti...
The data in Fig 3 can be characterized using a single set of dissociation constants for the WT, D, a...
(A) Within the MWC and KNF models, each CRP subunit can assume either an active or an inactive confo...
In addition to the wild type CRP subunit (denoted WT), the mutation D53H (denoted D) and the mutatio...
Binding of RNAP (blue) to a promoter is facilitated by the binding of the activator CRP. Simultaneou...
The DNA unbound states from Fig 2 are shown together with the DNA bound states. The Boltzmann weight...
<p>Ensemble of structures (dynamic states) are selected according to their dynamic behavior among th...
Protein Kinase A (PKA) is the major receptor for the cyclic adenosine monophosphate (cAMP) secondary...
<p>A summary of the dissociation constants (Kd) of WT CRD-BP in comparison with its KH variants for ...
<p><b>(A)</b> “Double Conformational Selection” Model proposed for PKA-RIα activation. The inactive ...
Allosteric transcription factors undergo binding events at inducer binding sites as well as at disti...
(a) The MWC model for hemoglobin [3]. All four subunits are simultaneously in either an R (Relaxed) ...
Allosteric transcription factors undergo binding events both at their operator binding sites as well...
(a) The relations among PRR, ΔGi and CR for the MWC model with two states, plotted according to Eqs ...
The MM-GBSA binding free energies (kcal/mol) of three different VDR and CYP24A1 models.</p
Allosteric transcription factors undergo binding events at inducer binding sites as well as at disti...