Additional file 10: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Additional file 2: of Root enhancement in cytokinin-deficient oilseed rape causes leaf mineral enrichment, increases the chlorophyll concentration under nutrient limitation and enhances the phytoremediation capacity

Erika Nehnevajova (6385682)
Eswarayya Ramireddy (5829134)
Andrea Stolz (265910)
Maria Gerdemann-Knörck (6385688)
Ondřej Novák (132054)
Miroslav Strnad (157788)
Thomas Schmülling (28396)

February 2019

Table S2. Leaf element concentration in leaves of one-month-old Brassica napus plants overexpressing...

Additional file 7: of Co-linearity and divergence of the A subgenome of Brassica juncea compared with other Brassica species carrying different A subgenomes

Jun Zou (683)
Dandan Hu (2823056)
Peifa Liu (3294570)
Harsh Raman (132066)
Zhongsong Liu (447400)
Xianjun Liu (433040)
Isobel Parkin (171781)
Boulos Chalhoub (3294573)
Jinling Meng (118331)

January 2016

The ∆K value of the population genetic structure of the 26 Brassica accessions generated using the S...

Additional file 10: of Diversification of cytokinin phosphotransfer signaling genes in Medicago truncatula and other legume genomes

Sovanna Tan (6700676)
Frédéric Debellé (681781)
Pascal Gamas (231748)
Florian Frugier (504628)
Mathias Brault (6700679)

May 2019

List of putative RRBs in the genome of Arabidopsis thaliana, Vitis vinifera and all studied legumes....

Additional file 11: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Lijun Kong (503392)
Kun Zhao (279513)
Yingying Gao (109828)
Liming Miao (4908292)
Chaoquan Chen (4908295)
Hang Deng (1664668)
Zhenning Liu (503391)
Xiaolin Yu (192623)

October 2018

Table S5. Elements relate to hormone and stress in the promotor of CRFs predicted by PlantCARE. (XLS...

Additional file 9: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Lijun Kong (503392)
Kun Zhao (279513)
Yingying Gao (109828)
Liming Miao (4908292)
Chaoquan Chen (4908295)
Hang Deng (1664668)
Zhenning Liu (503391)
Xiaolin Yu (192623)

October 2018

Figure S6. Ka/Ks values of CRF orthologous gene pairs of Br-At, Bol-At and Bna-At over a sliding win...

Additional file 8: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Lijun Kong (503392)
Kun Zhao (279513)
Yingying Gao (109828)
Liming Miao (4908292)
Chaoquan Chen (4908295)
Hang Deng (1664668)
Zhenning Liu (503391)
Xiaolin Yu (192623)

October 2018

Figure S5. Gene retention ratios of CRFs in the three sub-genomes of B. rapa, B. oleracea, and B. na...

Additional file 3: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Lijun Kong (503392)
Kun Zhao (279513)
Yingying Gao (109828)
Liming Miao (4908292)
Chaoquan Chen (4908295)
Hang Deng (1664668)
Zhenning Liu (503391)
Xiaolin Yu (192623)

October 2018

Figure S1. Conserve motif alignment of three types CRFs. The figure was obtained by ClustalX and Wed...

Additional file 5: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Lijun Kong (503392)
Kun Zhao (279513)
Yingying Gao (109828)
Liming Miao (4908292)
Chaoquan Chen (4908295)
Hang Deng (1664668)
Zhenning Liu (503391)
Xiaolin Yu (192623)

October 2018

Table S3. List of origin genes in B. rapa, B. nigra and amphidiploid genes in B. napus, B. juncea. H...

Additional file 4: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Lijun Kong (503392)
Kun Zhao (279513)
Yingying Gao (109828)
Liming Miao (4908292)
Chaoquan Chen (4908295)
Hang Deng (1664668)
Zhenning Liu (503391)
Xiaolin Yu (192623)

October 2018

Figure S2. Synteny analysis of CRFs among Brassica species. (A) Alignment between genes in diploid a...

Additional file 7: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Lijun Kong (503392)
Kun Zhao (279513)
Yingying Gao (109828)
Liming Miao (4908292)
Chaoquan Chen (4908295)
Hang Deng (1664668)
Zhenning Liu (503391)
Xiaolin Yu (192623)

October 2018

Figure S4. Box-plots of gene retention ratio. Statistics by genomes (A) and by gene names (B) are sh...

Additional file 6: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Lijun Kong (503392)
Kun Zhao (279513)
Yingying Gao (109828)
Liming Miao (4908292)
Chaoquan Chen (4908295)
Hang Deng (1664668)
Zhenning Liu (503391)
Xiaolin Yu (192623)

October 2018

Figure S3. Chromosomal mapping of CRFs in B. nigra and B. juncea. The CRFs in B. nigra (A) and B. ju...

Additional file 1: of Root enhancement in cytokinin-deficient oilseed rape causes leaf mineral enrichment, increases the chlorophyll concentration under nutrient limitation and enhances the phytoremediation capacity

Erika Nehnevajova (6385682)
Eswarayya Ramireddy (5829134)
Andrea Stolz (265910)
Maria Gerdemann-Knörck (6385688)
Ondřej Novák (132054)
Miroslav Strnad (157788)
Thomas Schmülling (28396)

February 2019

Table S1. Cytokinin concentration in Brassica napus seedlings overexpressing the CKX2 gene. The tabl...

Additional file 1: of Genome-wide analysis and stress-responsive expression of CCCH zinc finger family genes in Brassica rapa

Boyi Pi (6158561)
Xinghui He (6158564)
Ying Ruan (6158567)
Jyan-Chyun Jang (3179142)
Yong Huang (15745)

December 2018

Detailed information of CCCH gene family in B.rapa. Sequences and information of CCCH genes and prot...

Additional file 1: of Diversification of cytokinin phosphotransfer signaling genes in Medicago truncatula and other legume genomes

Sovanna Tan (6700676)
Frédéric Debellé (681781)
Pascal Gamas (231748)
Florian Frugier (504628)
Mathias Brault (6700679)

May 2019

List of putative cytokinin receptors in the genome of Arabidopsis thaliana, Vitis vinifera and all s...

Additional file 2: Figure S1. of Comparative transcriptome profiling of two Brassica napus cultivars under chromium toxicity and its alleviation by reduced glutathione

Rafaqat Gill (3555392)
Basharat Ali (2215288)
Peng Cui (33358)
Enhui Shen (3555395)
Muhammad Farooq (186443)
Faisal Islam (3555389)
Shafaqat Ali (2154532)
Bizeng Mao (3555398)
Weijun Zhou (2215300)

November 2016

Pie-chart shows the E-value, similarity and species distribution of Brassica napus L. to other plant...

Additional file 2: of Root enhancement in cytokinin-deficient oilseed rape causes leaf mineral enrichment, increases the chlorophyll concentration under nutrient limitation and enhances the phytoremediation capacity

Erika Nehnevajova (6385682)
Eswarayya Ramireddy (5829134)
Andrea Stolz (265910)
Maria Gerdemann-Knörck (6385688)
Ondřej Novák (132054)
Miroslav Strnad (157788)
Thomas Schmülling (28396)

February 2019

Table S2. Leaf element concentration in leaves of one-month-old Brassica napus plants overexpressing...

Additional file 7: of Co-linearity and divergence of the A subgenome of Brassica juncea compared with other Brassica species carrying different A subgenomes

Jun Zou (683)
Dandan Hu (2823056)
Peifa Liu (3294570)
Harsh Raman (132066)
Zhongsong Liu (447400)
Xianjun Liu (433040)
Isobel Parkin (171781)
Boulos Chalhoub (3294573)
Jinling Meng (118331)

January 2016

The ∆K value of the population genetic structure of the 26 Brassica accessions generated using the S...

Additional file 10: of Diversification of cytokinin phosphotransfer signaling genes in Medicago truncatula and other legume genomes

Sovanna Tan (6700676)
Frédéric Debellé (681781)
Pascal Gamas (231748)
Florian Frugier (504628)
Mathias Brault (6700679)

May 2019

List of putative RRBs in the genome of Arabidopsis thaliana, Vitis vinifera and all studied legumes....

Additional file 11: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Lijun Kong (503392)
Kun Zhao (279513)
Yingying Gao (109828)
Liming Miao (4908292)
Chaoquan Chen (4908295)
Hang Deng (1664668)
Zhenning Liu (503391)
Xiaolin Yu (192623)

October 2018

Table S5. Elements relate to hormone and stress in the promotor of CRFs predicted by PlantCARE. (XLS...

Additional file 9: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Lijun Kong (503392)
Kun Zhao (279513)
Yingying Gao (109828)
Liming Miao (4908292)
Chaoquan Chen (4908295)
Hang Deng (1664668)
Zhenning Liu (503391)
Xiaolin Yu (192623)

October 2018

Figure S6. Ka/Ks values of CRF orthologous gene pairs of Br-At, Bol-At and Bna-At over a sliding win...

Additional file 8: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Lijun Kong (503392)
Kun Zhao (279513)
Yingying Gao (109828)
Liming Miao (4908292)
Chaoquan Chen (4908295)
Hang Deng (1664668)
Zhenning Liu (503391)
Xiaolin Yu (192623)

October 2018

Figure S5. Gene retention ratios of CRFs in the three sub-genomes of B. rapa, B. oleracea, and B. na...

Additional file 3: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Lijun Kong (503392)
Kun Zhao (279513)
Yingying Gao (109828)
Liming Miao (4908292)
Chaoquan Chen (4908295)
Hang Deng (1664668)
Zhenning Liu (503391)
Xiaolin Yu (192623)

October 2018

Figure S1. Conserve motif alignment of three types CRFs. The figure was obtained by ClustalX and Wed...

Additional file 5: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Lijun Kong (503392)
Kun Zhao (279513)
Yingying Gao (109828)
Liming Miao (4908292)
Chaoquan Chen (4908295)
Hang Deng (1664668)
Zhenning Liu (503391)
Xiaolin Yu (192623)

October 2018

Table S3. List of origin genes in B. rapa, B. nigra and amphidiploid genes in B. napus, B. juncea. H...

Additional file 4: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Lijun Kong (503392)
Kun Zhao (279513)
Yingying Gao (109828)
Liming Miao (4908292)
Chaoquan Chen (4908295)
Hang Deng (1664668)
Zhenning Liu (503391)
Xiaolin Yu (192623)

October 2018

Figure S2. Synteny analysis of CRFs among Brassica species. (A) Alignment between genes in diploid a...

Additional file 7: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Lijun Kong (503392)
Kun Zhao (279513)
Yingying Gao (109828)
Liming Miao (4908292)
Chaoquan Chen (4908295)
Hang Deng (1664668)
Zhenning Liu (503391)
Xiaolin Yu (192623)

October 2018

Figure S4. Box-plots of gene retention ratio. Statistics by genomes (A) and by gene names (B) are sh...

Additional file 6: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Lijun Kong (503392)
Kun Zhao (279513)
Yingying Gao (109828)
Liming Miao (4908292)
Chaoquan Chen (4908295)
Hang Deng (1664668)
Zhenning Liu (503391)
Xiaolin Yu (192623)

October 2018

Figure S3. Chromosomal mapping of CRFs in B. nigra and B. juncea. The CRFs in B. nigra (A) and B. ju...

Additional file 1: of Root enhancement in cytokinin-deficient oilseed rape causes leaf mineral enrichment, increases the chlorophyll concentration under nutrient limitation and enhances the phytoremediation capacity

Erika Nehnevajova (6385682)
Eswarayya Ramireddy (5829134)
Andrea Stolz (265910)
Maria Gerdemann-Knörck (6385688)
Ondřej Novák (132054)
Miroslav Strnad (157788)
Thomas Schmülling (28396)

February 2019

Table S1. Cytokinin concentration in Brassica napus seedlings overexpressing the CKX2 gene. The tabl...

Additional file 1: of Genome-wide analysis and stress-responsive expression of CCCH zinc finger family genes in Brassica rapa

Boyi Pi (6158561)
Xinghui He (6158564)
Ying Ruan (6158567)
Jyan-Chyun Jang (3179142)
Yong Huang (15745)

December 2018

Detailed information of CCCH gene family in B.rapa. Sequences and information of CCCH genes and prot...

Additional file 1: of Diversification of cytokinin phosphotransfer signaling genes in Medicago truncatula and other legume genomes

Sovanna Tan (6700676)
Frédéric Debellé (681781)
Pascal Gamas (231748)
Florian Frugier (504628)
Mathias Brault (6700679)

May 2019

List of putative cytokinin receptors in the genome of Arabidopsis thaliana, Vitis vinifera and all s...

Additional file 2: Figure S1. of Comparative transcriptome profiling of two Brassica napus cultivars under chromium toxicity and its alleviation by reduced glutathione

Rafaqat Gill (3555392)
Basharat Ali (2215288)
Peng Cui (33358)
Enhui Shen (3555395)
Muhammad Farooq (186443)
Faisal Islam (3555389)
Shafaqat Ali (2154532)
Bizeng Mao (3555398)
Weijun Zhou (2215300)

November 2016

Pie-chart shows the E-value, similarity and species distribution of Brassica napus L. to other plant...

Additional file 2: of Root enhancement in cytokinin-deficient oilseed rape causes leaf mineral enrichment, increases the chlorophyll concentration under nutrient limitation and enhances the phytoremediation capacity

Erika Nehnevajova (6385682)
Eswarayya Ramireddy (5829134)
Andrea Stolz (265910)
Maria Gerdemann-Knörck (6385688)
Ondřej Novák (132054)
Miroslav Strnad (157788)
Thomas Schmülling (28396)

February 2019

Table S2. Leaf element concentration in leaves of one-month-old Brassica napus plants overexpressing...

Additional file 7: of Co-linearity and divergence of the A subgenome of Brassica juncea compared with other Brassica species carrying different A subgenomes

Jun Zou (683)
Dandan Hu (2823056)
Peifa Liu (3294570)
Harsh Raman (132066)
Zhongsong Liu (447400)
Xianjun Liu (433040)
Isobel Parkin (171781)
Boulos Chalhoub (3294573)
Jinling Meng (118331)

January 2016

The ∆K value of the population genetic structure of the 26 Brassica accessions generated using the S...

Additional file 10: of Diversification of cytokinin phosphotransfer signaling genes in Medicago truncatula and other legume genomes

Sovanna Tan (6700676)
Frédéric Debellé (681781)
Pascal Gamas (231748)
Florian Frugier (504628)
Mathias Brault (6700679)

May 2019

List of putative RRBs in the genome of Arabidopsis thaliana, Vitis vinifera and all studied legumes....

Additional file 10: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Abstract

Extracted data

Additional file 10: of Comparative analysis of cytokinin response factors in Brassica diploids and amphidiploids and insights into the evolution of Brassica species

Abstract

Extracted data

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