MOESM2 of Effect of pH and temperature on microbial community structure and carboxylic acid yield during the acidogenic digestion of duckweed

MOESM8 of From grass to gas: microbiome dynamics of grass biomass acidification under mesophilic and thermophilic temperatures

Christian Abendroth (382434)
Claudia Simeonov (4222144)
Juli PeretĂł (3543062)
Oreto AntĂşnez (4222147)
Raquel Gavidia (4222141)
Olaf Luschnig (4222138)
Manuel Porcar (215669)

July 2017

Additional file 8: Table S8. Number of reads and mean length of reads for archaea from the methane s...

Microbial community composition grouped by pH and temperature. A.

Weiguo Hou (105363)
Shang Wang (105366)
Hailiang Dong (105368)
Hongchen Jiang (105371)
Brandon R. Briggs (105373)
Joseph P. Peacock (105375)
Qiuyuan Huang (105378)
Liuqin Huang (105380)
Geng Wu (105382)
Xiaoyang Zhi (105385)
Wenjun Li (41954)
Jeremy A. Dodsworth (105387)
Brian P. Hedlund (105389)
Chuanlun Zhang (105390)
Hilairy E. Hartnett (105392)
Paul Dijkstra (105394)
Bruce A. Hungate (105397)

January 2013

UPGMA cluster tree based on Bray-Curtis dissimilarity obtained based on the 97% cutoff level; ...

MOESM1 of The microbial community structure in industrial biogas plants influences the degradation rate of straw and cellulose in batch tests

Li Sun (4624)
Tong Liu (107783)
Bettina MĂźller (3413231)
Anna SchnĂźrer (3413237)

June 2016

Additional file 1: Figure S1 Relative abundance of bacterial 16S rRNA gene at class level in 10 indu...

MOESM3 of Effect of pH and temperature on microbial community structure and carboxylic acid yield during the acidogenic digestion of duckweed

Ozgul Calicioglu (5830076)
Michael Shreve (5830079)
Tom Richard (5725946)
Rachel Brennan (141557)

October 2018

Additional file 3. Differential abundance analysis; this file contains the complete results of the d...

MOESM1 of Effect of pH and temperature on microbial community structure and carboxylic acid yield during the acidogenic digestion of duckweed

Ozgul Calicioglu (5830076)
Michael Shreve (5830079)
Tom Richard (5725946)
Rachel Brennan (141557)

October 2018

Additional file 1. Additional data related to chemical analysis; this file contains: final headspace...

MOESM1 of Trace element and temperature effects on microbial communities and links to biogas digester performance at high ammonia levels

Maria Westerholm (3421646)
Bettina MĂźller (3413231)
Simon Isaksson (3421649)
Anna SchnĂźrer (3413237)

September 2015

Additional file 1: Table S1. Total metal concentrations in digester samples. Table S2. Accession num...

MOESM1 of Dynamics of two methanogenic microbiomes incubated in polycyclic aromatic hydrocarbons, naphthenic acids, and oil field produced water

Bonahis Oko (4018484)
Yu Tao (305214)
David Stuckey (4018487)

May 2017

Additional file 1: Figure S1. The relative abundance at the Phylum level of the communities in the P...

MOESM1 of Preservation of microbial communities enriched on lignocellulose under thermophilic and high-solid conditions

Chaowei Yu (3477434)
Amitha Reddy (254493)
Christopher Simmons (3477428)
Blake Simmons (222815)
Steven Singer (3477425)
Jean VanderGheynst (3477431)

December 2015

Additional file 1. Relative abundance of organisms in enriched communities in R20, R21, and R23 by e...

MOESM3 of Global investigation of composition and interaction networks in gut microbiomes of individuals belonging to diverse geographies and age-groups

Deepak Yadav (555458)
Tarini Ghosh (3508754)
Sharmila Mande (3508757)

May 2016

Additional file 3: Heatmap showing the normalized abundances of major genera in the gut microbiomes ...

Additional file 2: of Archaea dominate the microbial community in an ecosystem with low-to-moderate temperature and extreme acidity

Aleksei Korzhenkov (3452216)
Stepan Toshchakov (3452234)
Rafael Bargiela (111929)
Huw Gibbard (6271310)
Manuel Ferrer (111944)
Alina Teplyuk (6271313)
David Jones (43312)
Ilya Kublanov (3452213)
Peter Golyshin (6271316)
Olga Golyshina (6271319)

January 2019

Metadata on TMEG-related sequences, used for diversity analysis of TMEG-related environmental clones...

MOESM5 of Global investigation of composition and interaction networks in gut microbiomes of individuals belonging to diverse geographies and age-groups

Deepak Yadav (555458)
Tarini Ghosh (3508754)
Sharmila Mande (3508757)

May 2016

Additional file 5: Heatmap showing the normalized abundances of major genera in the gut microbiomes ...

MOESM1 of Diversity and composition of bacterial endophytes among plant parts of Panax notoginseng

Linlin Dong (2255812)
Ruiyang Cheng (407027)
Lina Xiao (1704082)
Fugang Wei (5632463)
Guangfei Wei (5632466)
Jiang Xu (351121)
Yong Wang (12837)
Xiaotong Guo (5632469)
Zhongjian Chen (3360803)
Shilin Chen (85587)

August 2018

Additional file 1: Table S1. Barcodes used to tag the PCR products. Table S2. Relative abundance (<1...

MOESM2 of The core populations and co-occurrence patterns of prokaryotic communities in household biogas digesters

Junpeng Rui (657155)
Jiabao Li (152741)
Shiheng Zhang (3555263)
Xuefeng Yan (1322220)
Yuanpeng Wang (122052)
Xiangzhen Li (204357)

September 2015

Additional file 2: Table S1. Prokaryotic diversity indices based on 97 % identity of 16S rRNA gene s...

MOESM1 of Predicting compositions of microbial communities from stoichiometric models with applications for the biogas process

Sabine Koch (3151803)
Dirk Benndorf (1496455)
Karen Fronk (3505241)
Udo Reichl (87993)
Steffen Klamt (25228)

January 2016

Additional file 1. Investigation of proton translocation stoichiometries in D. vulgari

MOESM8 of Global investigation of composition and interaction networks in gut microbiomes of individuals belonging to diverse geographies and age-groups

Deepak Yadav (555458)
Tarini Ghosh (3508754)
Sharmila Mande (3508757)

May 2016

Additional file 8: Heatmap showing the normalized abundances of major genera in the gut microbiomes ...

MOESM8 of From grass to gas: microbiome dynamics of grass biomass acidification under mesophilic and thermophilic temperatures

Christian Abendroth (382434)
Claudia Simeonov (4222144)
Juli PeretĂł (3543062)
Oreto AntĂşnez (4222147)
Raquel Gavidia (4222141)
Olaf Luschnig (4222138)
Manuel Porcar (215669)

July 2017

Additional file 8: Table S8. Number of reads and mean length of reads for archaea from the methane s...

Microbial community composition grouped by pH and temperature. A.

Weiguo Hou (105363)
Shang Wang (105366)
Hailiang Dong (105368)
Hongchen Jiang (105371)
Brandon R. Briggs (105373)
Joseph P. Peacock (105375)
Qiuyuan Huang (105378)
Liuqin Huang (105380)
Geng Wu (105382)
Xiaoyang Zhi (105385)
Wenjun Li (41954)
Jeremy A. Dodsworth (105387)
Brian P. Hedlund (105389)
Chuanlun Zhang (105390)
Hilairy E. Hartnett (105392)
Paul Dijkstra (105394)
Bruce A. Hungate (105397)

January 2013

UPGMA cluster tree based on Bray-Curtis dissimilarity obtained based on the 97% cutoff level; ...

MOESM1 of The microbial community structure in industrial biogas plants influences the degradation rate of straw and cellulose in batch tests

Li Sun (4624)
Tong Liu (107783)
Bettina MĂźller (3413231)
Anna SchnĂźrer (3413237)

June 2016

Additional file 1: Figure S1 Relative abundance of bacterial 16S rRNA gene at class level in 10 indu...

MOESM3 of Effect of pH and temperature on microbial community structure and carboxylic acid yield during the acidogenic digestion of duckweed

Ozgul Calicioglu (5830076)
Michael Shreve (5830079)
Tom Richard (5725946)
Rachel Brennan (141557)

October 2018

Additional file 3. Differential abundance analysis; this file contains the complete results of the d...

MOESM1 of Effect of pH and temperature on microbial community structure and carboxylic acid yield during the acidogenic digestion of duckweed

Ozgul Calicioglu (5830076)
Michael Shreve (5830079)
Tom Richard (5725946)
Rachel Brennan (141557)

October 2018

Additional file 1. Additional data related to chemical analysis; this file contains: final headspace...

MOESM1 of Trace element and temperature effects on microbial communities and links to biogas digester performance at high ammonia levels

Maria Westerholm (3421646)
Bettina MĂźller (3413231)
Simon Isaksson (3421649)
Anna SchnĂźrer (3413237)

September 2015

Additional file 1: Table S1. Total metal concentrations in digester samples. Table S2. Accession num...

MOESM1 of Dynamics of two methanogenic microbiomes incubated in polycyclic aromatic hydrocarbons, naphthenic acids, and oil field produced water

Bonahis Oko (4018484)
Yu Tao (305214)
David Stuckey (4018487)

May 2017

Additional file 1: Figure S1. The relative abundance at the Phylum level of the communities in the P...

MOESM1 of Preservation of microbial communities enriched on lignocellulose under thermophilic and high-solid conditions

Chaowei Yu (3477434)
Amitha Reddy (254493)
Christopher Simmons (3477428)
Blake Simmons (222815)
Steven Singer (3477425)
Jean VanderGheynst (3477431)

December 2015

Additional file 1. Relative abundance of organisms in enriched communities in R20, R21, and R23 by e...

MOESM3 of Global investigation of composition and interaction networks in gut microbiomes of individuals belonging to diverse geographies and age-groups

Deepak Yadav (555458)
Tarini Ghosh (3508754)
Sharmila Mande (3508757)

May 2016

Additional file 3: Heatmap showing the normalized abundances of major genera in the gut microbiomes ...

Additional file 2: of Archaea dominate the microbial community in an ecosystem with low-to-moderate temperature and extreme acidity

Aleksei Korzhenkov (3452216)
Stepan Toshchakov (3452234)
Rafael Bargiela (111929)
Huw Gibbard (6271310)
Manuel Ferrer (111944)
Alina Teplyuk (6271313)
David Jones (43312)
Ilya Kublanov (3452213)
Peter Golyshin (6271316)
Olga Golyshina (6271319)

January 2019

Metadata on TMEG-related sequences, used for diversity analysis of TMEG-related environmental clones...

MOESM5 of Global investigation of composition and interaction networks in gut microbiomes of individuals belonging to diverse geographies and age-groups

Deepak Yadav (555458)
Tarini Ghosh (3508754)
Sharmila Mande (3508757)

May 2016

Additional file 5: Heatmap showing the normalized abundances of major genera in the gut microbiomes ...

MOESM1 of Diversity and composition of bacterial endophytes among plant parts of Panax notoginseng

Linlin Dong (2255812)
Ruiyang Cheng (407027)
Lina Xiao (1704082)
Fugang Wei (5632463)
Guangfei Wei (5632466)
Jiang Xu (351121)
Yong Wang (12837)
Xiaotong Guo (5632469)
Zhongjian Chen (3360803)
Shilin Chen (85587)

August 2018

Additional file 1: Table S1. Barcodes used to tag the PCR products. Table S2. Relative abundance (<1...

MOESM2 of The core populations and co-occurrence patterns of prokaryotic communities in household biogas digesters

Junpeng Rui (657155)
Jiabao Li (152741)
Shiheng Zhang (3555263)
Xuefeng Yan (1322220)
Yuanpeng Wang (122052)
Xiangzhen Li (204357)

September 2015

Additional file 2: Table S1. Prokaryotic diversity indices based on 97 % identity of 16S rRNA gene s...

MOESM1 of Predicting compositions of microbial communities from stoichiometric models with applications for the biogas process

Sabine Koch (3151803)
Dirk Benndorf (1496455)
Karen Fronk (3505241)
Udo Reichl (87993)
Steffen Klamt (25228)

January 2016

Additional file 1. Investigation of proton translocation stoichiometries in D. vulgari

MOESM8 of Global investigation of composition and interaction networks in gut microbiomes of individuals belonging to diverse geographies and age-groups

Deepak Yadav (555458)
Tarini Ghosh (3508754)
Sharmila Mande (3508757)

May 2016

Additional file 8: Heatmap showing the normalized abundances of major genera in the gut microbiomes ...

MOESM8 of From grass to gas: microbiome dynamics of grass biomass acidification under mesophilic and thermophilic temperatures

Christian Abendroth (382434)
Claudia Simeonov (4222144)
Juli PeretĂł (3543062)
Oreto AntĂşnez (4222147)
Raquel Gavidia (4222141)
Olaf Luschnig (4222138)
Manuel Porcar (215669)

July 2017

Additional file 8: Table S8. Number of reads and mean length of reads for archaea from the methane s...

Microbial community composition grouped by pH and temperature. A.

Weiguo Hou (105363)
Shang Wang (105366)
Hailiang Dong (105368)
Hongchen Jiang (105371)
Brandon R. Briggs (105373)
Joseph P. Peacock (105375)
Qiuyuan Huang (105378)
Liuqin Huang (105380)
Geng Wu (105382)
Xiaoyang Zhi (105385)
Wenjun Li (41954)
Jeremy A. Dodsworth (105387)
Brian P. Hedlund (105389)
Chuanlun Zhang (105390)
Hilairy E. Hartnett (105392)
Paul Dijkstra (105394)
Bruce A. Hungate (105397)

January 2013

UPGMA cluster tree based on Bray-Curtis dissimilarity obtained based on the 97% cutoff level; ...

MOESM1 of The microbial community structure in industrial biogas plants influences the degradation rate of straw and cellulose in batch tests

Li Sun (4624)
Tong Liu (107783)
Bettina MĂźller (3413231)
Anna SchnĂźrer (3413237)

June 2016

Additional file 1: Figure S1 Relative abundance of bacterial 16S rRNA gene at class level in 10 indu...

MOESM2 of Effect of pH and temperature on microbial community structure and carboxylic acid yield during the acidogenic digestion of duckweed

Abstract

Extracted data

MOESM2 of Effect of pH and temperature on microbial community structure and carboxylic acid yield during the acidogenic digestion of duckweed

Abstract

Extracted data

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