Table S11. 48 sampling scenarios implemented in permutations to identify significance thresholds for identifying differentially methylated regions. A list of the high and low cow selected for each herd for each of the 48 sampling strategies. (DOCX 13 kb
Abstract Background Milk yield for Holstein cows has doubled over five decades due to genetic select...
Additional file 1: Fig. S1. DNA methylation level trends. (A) Bean plots showing the methylation lev...
Additional file 4: Fig. S4. DNA methylation landscape. (A) The number of DMCs grouped by the differe...
Table S1. Chromosome, start nucleotide, end nucleotide, length, summit, tags, Log P, and fold enrich...
Table S4. Chromosome, start nucleotide, end nucleotide, length, summit, tags, Log P, and fold enrich...
Table S2. Chromosome, start nucleotide, end nucleotide, length, summit, tags, Log P, and fold enrich...
Table S3. Chromosome, start nucleotide, end nucleotide, length, summit, tags, Log P, and fold enrich...
Table S5. Chromosome, start nucleotide, end nucleotide, length, summit, tags, Log P, and fold enrich...
Table S8. Location (chromosome, starting and ending nucleotide) of putative case-control differentia...
Table S6. Chromosome, start nucleotide, end nucleotide, length, summit, tags, Log P, and fold enrich...
Table S9. Location (chromosome, starting and ending nucleotide) of putative environmental differenti...
Figure S1. Average geometric mean reads per nucleotide over 10 kb windows and the number of annotate...
Figure S2. The location and surrounding genomic region for the top 11 most significant case-control ...
Table S7. Functional annotation charts of genes located within partially methylated domains with the...
Figure S3. The location and surrounding genomic region for the top 10 most significant environmental...
Abstract Background Milk yield for Holstein cows has doubled over five decades due to genetic select...
Additional file 1: Fig. S1. DNA methylation level trends. (A) Bean plots showing the methylation lev...
Additional file 4: Fig. S4. DNA methylation landscape. (A) The number of DMCs grouped by the differe...
Table S1. Chromosome, start nucleotide, end nucleotide, length, summit, tags, Log P, and fold enrich...
Table S4. Chromosome, start nucleotide, end nucleotide, length, summit, tags, Log P, and fold enrich...
Table S2. Chromosome, start nucleotide, end nucleotide, length, summit, tags, Log P, and fold enrich...
Table S3. Chromosome, start nucleotide, end nucleotide, length, summit, tags, Log P, and fold enrich...
Table S5. Chromosome, start nucleotide, end nucleotide, length, summit, tags, Log P, and fold enrich...
Table S8. Location (chromosome, starting and ending nucleotide) of putative case-control differentia...
Table S6. Chromosome, start nucleotide, end nucleotide, length, summit, tags, Log P, and fold enrich...
Table S9. Location (chromosome, starting and ending nucleotide) of putative environmental differenti...
Figure S1. Average geometric mean reads per nucleotide over 10 kb windows and the number of annotate...
Figure S2. The location and surrounding genomic region for the top 11 most significant case-control ...
Table S7. Functional annotation charts of genes located within partially methylated domains with the...
Figure S3. The location and surrounding genomic region for the top 10 most significant environmental...
Abstract Background Milk yield for Holstein cows has doubled over five decades due to genetic select...
Additional file 1: Fig. S1. DNA methylation level trends. (A) Bean plots showing the methylation lev...
Additional file 4: Fig. S4. DNA methylation landscape. (A) The number of DMCs grouped by the differe...