Additional file 5: of Metabolite profiling and transcriptomic analyses reveal an essential role of UVR8-mediated signal transduction pathway in regulating flavonoid biosynthesis in tea plants (Camellia sinensis) in response to shading

Linlin Liu (426425)
Yingying Li (50341)
Guangbiao She (3071205)
Xianchen Zhang (5852438)
Brian Jordan (2639524)
Qi Chen (144168)
Jian Zhao (219525)
Xiaochun Wan (408279)

Publication date

October 2018

DOI

10.6084/m9.figshare.7203926.v1

Abstract

Transcript abundance of potential genes involved in the UVR8-mediated signal transduction pathway annotated in tea transcriptome datasets. (XLSX 11 kb

Extracted data

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Data Protection

Additional file 5: of Metabolite profiling and transcriptomic analyses reveal an essential role of UVR8-mediated signal transduction pathway in regulating flavonoid biosynthesis in tea plants (Camellia sinensis) in response to shading

Linlin Liu (426425)
Yingying Li (50341)
Guangbiao She (3071205)
Xianchen Zhang (5852438)
Brian Jordan (2639524)
Qi Chen (144168)
Jian Zhao (219525)
Xiaochun Wan (408279)

Open link

Publication date

October 2018

DOI

10.6084/m9.figshare.7203926.v1

Abstract

Transcript abundance of potential genes involved in the UVR8-mediated signal transduction pathway annotated in tea transcriptome datasets. (XLSX 11 kb

Extracted data

Xiaohan Xu (661043)
Jing Tao (334550)
Anqi Xing (6697586)
Zichen Wu (6697589)
Yuqin Xu (8474352)
Yi Sun (118759)
Jiangyuan Zhu (8358765)
Xiang Dai (46403)
Yuhua Wang (289796)

October 2022

Additional file 11: Table S8: Two-way ANOVA test F-value of genes expression levels related to absci...

Additional file 10 of Transcriptome analysis reveals the roles of phytohormone signaling in tea plant (Camellia sinensis L.) flower development

Xiaohan Xu (661043)
Jing Tao (334550)
Anqi Xing (6697586)
Zichen Wu (6697589)
Yuqin Xu (8474352)
Yi Sun (118759)
Jiangyuan Zhu (8358765)
Xiang Dai (46403)
Yuhua Wang (289796)

October 2022

Additional file 10: Table S7: Two-way ANOVA test F-value of genes expression levels related to cytok...

Additional file 13 of Transcriptome analysis reveals the roles of phytohormone signaling in tea plant (Camellia sinensis L.) flower development

Xiaohan Xu (661043)
Jing Tao (334550)
Anqi Xing (6697586)
Zichen Wu (6697589)
Yuqin Xu (8474352)
Yi Sun (118759)
Jiangyuan Zhu (8358765)
Xiang Dai (46403)
Yuhua Wang (289796)

October 2022

Additional file 13: Table S10: Two-way ANOVA test F-value of genes expression levels related to sali...

Additional file 6: of Metabolite profiling and transcriptomic analyses reveal an essential role of UVR8-mediated signal transduction pathway in regulating flavonoid biosynthesis in tea plants (Camellia sinensis) in response to shading

Linlin Liu (426425)
Yingying Li (50341)
Guangbiao She (3071205)
Xianchen Zhang (5852438)
Brian Jordan (2639524)
Qi Chen (144168)
Jian Zhao (219525)
Xiaochun Wan (408279)

October 2018

Transcript abundance of potential genes involved in the UV-A/blue light signal transduction pathway ...

Additional file 3: of Metabolite profiling and transcriptomic analyses reveal an essential role of UVR8-mediated signal transduction pathway in regulating flavonoid biosynthesis in tea plants (Camellia sinensis) in response to shading

Linlin Liu (426425)
Yingying Li (50341)
Guangbiao She (3071205)
Xianchen Zhang (5852438)
Brian Jordan (2639524)
Qi Chen (144168)
Jian Zhao (219525)
Xiaochun Wan (408279)

October 2018

Transcript abundance of main genes involved in the flavonoid biosynthetic pathway annotated in tea t...

Additional file 7: of Metabolite profiling and transcriptomic analyses reveal an essential role of UVR8-mediated signal transduction pathway in regulating flavonoid biosynthesis in tea plants (Camellia sinensis) in response to shading

Linlin Liu (426425)
Yingying Li (50341)
Guangbiao She (3071205)
Xianchen Zhang (5852438)
Brian Jordan (2639524)
Qi Chen (144168)
Jian Zhao (219525)
Xiaochun Wan (408279)

October 2018

Transcript abundance of potential genes involved in the red/far-red light signal transduction pathwa...

Additional file 1: of Metabolite profiling and transcriptomic analyses reveal an essential role of UVR8-mediated signal transduction pathway in regulating flavonoid biosynthesis in tea plants (Camellia sinensis) in response to shading

Linlin Liu (426425)
Yingying Li (50341)
Guangbiao She (3071205)
Xianchen Zhang (5852438)
Brian Jordan (2639524)
Qi Chen (144168)
Jian Zhao (219525)
Xiaochun Wan (408279)

October 2018

Primers of annotated unigenes designed for qRT-PCR analysis in this study. (XLSX 12 kb

Additional file 5 of Transcriptome analysis reveals the roles of phytohormone signaling in tea plant (Camellia sinensis L.) flower development

Xiaohan Xu (661043)
Jing Tao (334550)
Anqi Xing (6697586)
Zichen Wu (6697589)
Yuqin Xu (8474352)
Yi Sun (118759)
Jiangyuan Zhu (8358765)
Xiang Dai (46403)
Yuhua Wang (289796)

October 2022

Additional file 5: Table S2: ESI-MS/MS parameters for determination of eight phytohormones

Metabolite profiling and transcriptomic analyses reveal an essential role of UVR8-mediated signal transduction pathway in regulating flavonoid biosynthesis in tea plants (Camellia sinensis) in response to shading

Linlin Liu
Yingying Li
Guangbiao She
Xianchen Zhang
Brian Jordan
Qi Chen
Jian Zhao
Xiaochun Wan

October 2018

Abstract Background Tea is the most popular nonalcoholic beverage worldwide for its pleasant charact...

Additional file 5: of Transcriptomic and phytochemical analysis of the biosynthesis of characteristic constituents in tea (Camellia sinensis) compared with oil tea (Camellia oleifera)

Yuling Tai (3410630)
Chaoling Wei (408278)
Hua Yang (120668)
Liang Zhang (41392)
Qi Chen (144168)
Weiwei Deng (2550691)
Shu Wei (845364)
Jing Zhang (23775)
Congbing Fang (3410627)
Chitang Ho (3410633)
Xiaochun Wan (408279)

August 2015

List of DEGs analyzed by qRT-PCR. A total of 34 genes involved in the flavonoid, theanine and caffei...

Additional file 3: of Gene co-expression network analysis reveals coordinated regulation of three characteristic secondary biosynthetic pathways in tea plant (Camellia sinensis)

Yuling Tai (3410630)
Chun Liu (47227)
Shuwei Yu (5636075)
Hua Yang (120668)
Jiameng Sun (5636078)
Chunxiao Guo (5518769)
Bei Huang (485021)
Zhaoye Liu (5636081)
Yi Yuan (180239)
Enhua Xia (5636084)
Chaoling Wei (408278)
Xiaochun Wan (408279)

August 2018

Functional analysis of unigenes in blue, red and magenta modules enriched in the photosynthesis path...

Additional file 2: of Transcriptomic and phytochemical analysis of the biosynthesis of characteristic constituents in tea (Camellia sinensis) compared with oil tea (Camellia oleifera)

Yuling Tai (3410630)
Chaoling Wei (408278)
Hua Yang (120668)
Liang Zhang (41392)
Qi Chen (144168)
Weiwei Deng (2550691)
Shu Wei (845364)
Jing Zhang (23775)
Congbing Fang (3410627)
Chitang Ho (3410633)
Xiaochun Wan (408279)

August 2015

Statistical comparison of DEGs between any two tissues. The genes were classified into three classes...

Additional file 5: of Gene co-expression network analysis reveals coordinated regulation of three characteristic secondary biosynthetic pathways in tea plant (Camellia sinensis)

Yuling Tai (3410630)
Chun Liu (47227)
Shuwei Yu (5636075)
Hua Yang (120668)
Jiameng Sun (5636078)
Chunxiao Guo (5518769)
Bei Huang (485021)
Zhaoye Liu (5636081)
Yi Yuan (180239)
Enhua Xia (5636084)
Chaoling Wei (408278)
Xiaochun Wan (408279)

August 2018

Unigene IDs and primer sequences for selected transcripts used for qPCR validation. (XLSX 9 kb

Additional file 9 of Transcriptome analysis reveals the roles of phytohormone signaling in tea plant (Camellia sinensis L.) flower development

Xiaohan Xu (661043)
Jing Tao (334550)
Anqi Xing (6697586)
Zichen Wu (6697589)
Yuqin Xu (8474352)
Yi Sun (118759)
Jiangyuan Zhu (8358765)
Xiang Dai (46403)
Yuhua Wang (289796)

October 2022

Additional file 9: Table S6: Two-way ANOVA test F-value of genes expression levels related to auxin ...

Additional file 11 of Transcriptome analysis reveals the roles of phytohormone signaling in tea plant (Camellia sinensis L.) flower development

Xiaohan Xu (661043)
Jing Tao (334550)
Anqi Xing (6697586)
Zichen Wu (6697589)
Yuqin Xu (8474352)
Yi Sun (118759)
Jiangyuan Zhu (8358765)
Xiang Dai (46403)
Yuhua Wang (289796)

October 2022

Additional file 11: Table S8: Two-way ANOVA test F-value of genes expression levels related to absci...

Additional file 10 of Transcriptome analysis reveals the roles of phytohormone signaling in tea plant (Camellia sinensis L.) flower development

Xiaohan Xu (661043)
Jing Tao (334550)
Anqi Xing (6697586)
Zichen Wu (6697589)
Yuqin Xu (8474352)
Yi Sun (118759)
Jiangyuan Zhu (8358765)
Xiang Dai (46403)
Yuhua Wang (289796)

October 2022

Additional file 10: Table S7: Two-way ANOVA test F-value of genes expression levels related to cytok...

Additional file 13 of Transcriptome analysis reveals the roles of phytohormone signaling in tea plant (Camellia sinensis L.) flower development

Xiaohan Xu (661043)
Jing Tao (334550)
Anqi Xing (6697586)
Zichen Wu (6697589)
Yuqin Xu (8474352)
Yi Sun (118759)
Jiangyuan Zhu (8358765)
Xiang Dai (46403)
Yuhua Wang (289796)

October 2022

Additional file 13: Table S10: Two-way ANOVA test F-value of genes expression levels related to sali...

Linlin Liu (426425)
Yingying Li (50341)
Guangbiao She (3071205)
Xianchen Zhang (5852438)
Brian Jordan (2639524)
Qi Chen (144168)
Jian Zhao (219525)
Xiaochun Wan (408279)

October 2018

Transcript abundance of potential genes involved in the UV-A/blue light signal transduction pathway ...

Linlin Liu (426425)
Yingying Li (50341)
Guangbiao She (3071205)
Xianchen Zhang (5852438)
Brian Jordan (2639524)
Qi Chen (144168)
Jian Zhao (219525)
Xiaochun Wan (408279)

October 2018

Transcript abundance of main genes involved in the flavonoid biosynthetic pathway annotated in tea t...

Linlin Liu (426425)
Yingying Li (50341)
Guangbiao She (3071205)
Xianchen Zhang (5852438)
Brian Jordan (2639524)
Qi Chen (144168)
Jian Zhao (219525)
Xiaochun Wan (408279)

October 2018

Transcript abundance of potential genes involved in the red/far-red light signal transduction pathwa...

Linlin Liu (426425)
Yingying Li (50341)
Guangbiao She (3071205)
Xianchen Zhang (5852438)
Brian Jordan (2639524)
Qi Chen (144168)
Jian Zhao (219525)
Xiaochun Wan (408279)

October 2018

Primers of annotated unigenes designed for qRT-PCR analysis in this study. (XLSX 12 kb

Additional file 5 of Transcriptome analysis reveals the roles of phytohormone signaling in tea plant (Camellia sinensis L.) flower development

Xiaohan Xu (661043)
Jing Tao (334550)
Anqi Xing (6697586)
Zichen Wu (6697589)
Yuqin Xu (8474352)
Yi Sun (118759)
Jiangyuan Zhu (8358765)
Xiang Dai (46403)
Yuhua Wang (289796)

October 2022

Additional file 5: Table S2: ESI-MS/MS parameters for determination of eight phytohormones

Linlin Liu
Yingying Li
Guangbiao She
Xianchen Zhang
Brian Jordan
Qi Chen
Jian Zhao
Xiaochun Wan

October 2018

Abstract Background Tea is the most popular nonalcoholic beverage worldwide for its pleasant charact...

Additional file 5: of Transcriptomic and phytochemical analysis of the biosynthesis of characteristic constituents in tea (Camellia sinensis) compared with oil tea (Camellia oleifera)

Yuling Tai (3410630)
Chaoling Wei (408278)
Hua Yang (120668)
Liang Zhang (41392)
Qi Chen (144168)
Weiwei Deng (2550691)
Shu Wei (845364)
Jing Zhang (23775)
Congbing Fang (3410627)
Chitang Ho (3410633)
Xiaochun Wan (408279)

August 2015

List of DEGs analyzed by qRT-PCR. A total of 34 genes involved in the flavonoid, theanine and caffei...

Additional file 3: of Gene co-expression network analysis reveals coordinated regulation of three characteristic secondary biosynthetic pathways in tea plant (Camellia sinensis)

Yuling Tai (3410630)
Chun Liu (47227)
Shuwei Yu (5636075)
Hua Yang (120668)
Jiameng Sun (5636078)
Chunxiao Guo (5518769)
Bei Huang (485021)
Zhaoye Liu (5636081)
Yi Yuan (180239)
Enhua Xia (5636084)
Chaoling Wei (408278)
Xiaochun Wan (408279)

August 2018

Functional analysis of unigenes in blue, red and magenta modules enriched in the photosynthesis path...

Additional file 2: of Transcriptomic and phytochemical analysis of the biosynthesis of characteristic constituents in tea (Camellia sinensis) compared with oil tea (Camellia oleifera)

Yuling Tai (3410630)
Chaoling Wei (408278)
Hua Yang (120668)
Liang Zhang (41392)
Qi Chen (144168)
Weiwei Deng (2550691)
Shu Wei (845364)
Jing Zhang (23775)
Congbing Fang (3410627)
Chitang Ho (3410633)
Xiaochun Wan (408279)

August 2015

Statistical comparison of DEGs between any two tissues. The genes were classified into three classes...

Additional file 5: of Gene co-expression network analysis reveals coordinated regulation of three characteristic secondary biosynthetic pathways in tea plant (Camellia sinensis)

Yuling Tai (3410630)
Chun Liu (47227)
Shuwei Yu (5636075)
Hua Yang (120668)
Jiameng Sun (5636078)
Chunxiao Guo (5518769)
Bei Huang (485021)
Zhaoye Liu (5636081)
Yi Yuan (180239)
Enhua Xia (5636084)
Chaoling Wei (408278)
Xiaochun Wan (408279)

August 2018

Unigene IDs and primer sequences for selected transcripts used for qPCR validation. (XLSX 9 kb

Additional file 9 of Transcriptome analysis reveals the roles of phytohormone signaling in tea plant (Camellia sinensis L.) flower development

Xiaohan Xu (661043)
Jing Tao (334550)
Anqi Xing (6697586)
Zichen Wu (6697589)
Yuqin Xu (8474352)
Yi Sun (118759)
Jiangyuan Zhu (8358765)
Xiang Dai (46403)
Yuhua Wang (289796)

October 2022

Additional file 9: Table S6: Two-way ANOVA test F-value of genes expression levels related to auxin ...

Additional file 11 of Transcriptome analysis reveals the roles of phytohormone signaling in tea plant (Camellia sinensis L.) flower development

Xiaohan Xu (661043)
Jing Tao (334550)
Anqi Xing (6697586)
Zichen Wu (6697589)
Yuqin Xu (8474352)
Yi Sun (118759)
Jiangyuan Zhu (8358765)
Xiang Dai (46403)
Yuhua Wang (289796)

October 2022

Additional file 11: Table S8: Two-way ANOVA test F-value of genes expression levels related to absci...

Additional file 10 of Transcriptome analysis reveals the roles of phytohormone signaling in tea plant (Camellia sinensis L.) flower development

Xiaohan Xu (661043)
Jing Tao (334550)
Anqi Xing (6697586)
Zichen Wu (6697589)
Yuqin Xu (8474352)
Yi Sun (118759)
Jiangyuan Zhu (8358765)
Xiang Dai (46403)
Yuhua Wang (289796)

October 2022

Additional file 10: Table S7: Two-way ANOVA test F-value of genes expression levels related to cytok...

Additional file 13 of Transcriptome analysis reveals the roles of phytohormone signaling in tea plant (Camellia sinensis L.) flower development

Xiaohan Xu (661043)
Jing Tao (334550)
Anqi Xing (6697586)
Zichen Wu (6697589)
Yuqin Xu (8474352)
Yi Sun (118759)
Jiangyuan Zhu (8358765)
Xiang Dai (46403)
Yuhua Wang (289796)

October 2022

Additional file 13: Table S10: Two-way ANOVA test F-value of genes expression levels related to sali...

Additional file 5: of Metabolite profiling and transcriptomic analyses reveal an essential role of UVR8-mediated signal transduction pathway in regulating flavonoid biosynthesis in tea plants (Camellia sinensis) in response to shading

Abstract

Extracted data

Additional file 5: of Metabolite profiling and transcriptomic analyses reveal an essential role of UVR8-mediated signal transduction pathway in regulating flavonoid biosynthesis in tea plants (Camellia sinensis) in response to shading

Abstract

Extracted data

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