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Collection information for <i>Triatoma dimidiata</i> specimens used for RAD-sequencing.

Lucia C. Orantes (3267435)
Carlota Monroy (266368)
Patricia L. Dorn (266349)
Lori Stevens (76806)
Donna M. Rizzo (669325)
Leslie Morrissey (5870162)
John P. Hanley (5870165)
Antonieta Guadalupe Rodas (628379)
Bethany Richards (5870168)
Kimberly F. Wallin (4839441)
Sara Helms Cahan (106948)

Publication date

October 2018

DOI

10.1371/journal.pntd.0006730.t001

Publisher

Public Library of Science (PLoS)

Abstract

Collection information for Triatoma dimidiata specimens used for RAD-sequencing.</p

Extracted data

Related items

Specimens for DNA analysis.

J. Berton C. Harris (212153)
Pamela C. Rasmussen (665071)
Ding Li Yong (212150)
Dewi M. Prawiradilaga (665072)
Dadang Dwi Putra (665073)
Philip D. Round (665074)
Frank E. Rheindt (197088)

November 2014

<p>Abbreviations: BMNHC – Burke Museum of Natural History and Culture (University of Washington, Sea...

Details of <i>Plasmodium</i> species detected using blood and tissue samples of <i>M</i>. <i>radiata</i> species.

Jyotsana Dixit (6058514)
Arun Zachariah (3260130)
Sajesh P. K. (5444063)
Bathrachalam Chandramohan (6058517)
Vinoth Shanmuganatham (6058520)
K. Praveen Karanth (146316)

December 2018

Details of Plasmodium species detected using blood and tissue samples of M. radiata species.</p

Data for: DNA barcoding and conservation of rattans in trade

Kuhnhäuser, Benedikt Georg

March 2023

Data for project DNA barcoding and conservation of rattans in trade (https://www.kew.org/science/our...

Collection information for specimens used in morphological and molecular analyses and GenBank accession numbers.

Camila F. Silva (4056871)
Victor C. Seixas (4056868)
Rômulo Barroso (3284088)
Maikon Di Domenico (4056862)
Antonia C. Z. Amaral (4056865)
Paulo C. Paiva (3284091)

May 2017

<p>Collection information for specimens used in morphological and molecular analyses and GenBank acc...

Specimen information for taxa included in this study with mitogenomic DNA sequence data.

Jan Yde Poulsen (453714)
Tetsuya Sado (453711)
Christoph Hahn (755455)
Ingvar Byrkjedal (2936463)
Masatoshi Moku (2936466)
Masaki Miya (68675)

August 2016

<p>Specimen information for taxa included in this study with mitogenomic DNA sequence data.</p

Sequencing information for the four <i>Tilia</i> species used in this study.

Jie Cai (389349)
Peng-Fei Ma (187879)
Hong-Tao Li (277766)
De-Zhu Li (128942)

November 2015

<p>Sequencing information for the four <i>Tilia</i> species used in this study.</p

Species and specimens used in the present study, with location, reference collection details, and GenBank accession numbers. Newly obtained sequenced in bold.

Sittiporn Parnmen (110727)
Robert Lücking (111695)
H. Thorsten Lumbsch (110741)

December 2012

<p>Species and specimens used in the present study, with location, reference collection details, and...

Termite specimens, COII Genbank accession numbers, taxonomical affiliations in OPTSIL clustering, and collection data.

Huxley M. Makonde (380019)
Hamadi I. Boga (380020)
Zipporah Osiemo (380021)
Romano Mwirichia (380022)
J. Benjamin Stielow (211598)
Markus Göker (65630)
Hans-Peter Klenk (158173)

February 2013

<p>Termite specimens, COII Genbank accession numbers, taxonomical affiliations in OPTSIL clustering,...

Summary of the number of specimen analyzed, the number of sequences produced, the sequencing type and taxonomic units obtained for each morphospecies.

Raphaël Morard (200006)
Nele M. Vollmar (5474657)
Mattia Greco (6495146)
Michal Kucera (303387)

March 2019

Summary of the number of specimen analyzed, the number of sequences produced, the sequencing type an...

Information for sample collection sites, voucher specimens, sequencing results and genome assembly.

Sung-Mo An (17124946)
Bo-Yun Kim (7060676)
Halam Kang (17124949)
Ha-Rim Lee (694846)
Yoo-Bin Lee (14100687)
Yoo-Jung Park (9707140)
Kyeong-Sik Cheon (4381912)
Kyung-Ah Kim (90998)

October 2023

Information for sample collection sites, voucher specimens, sequencing results and genome assembly.<...

Taxonomic information associated with specimen records and BINs on BOLD. Of the 2 M sequence records on BOLD, 1.81 M met the quality standards for a BIN assignment and they include representatives of 274 K BINs.

Sujeevan Ratnasingham (167085)
Paul D. N. Hebert (127093)

July 2013

<p>Taxonomic information associated with specimen records and BINs on BOLD. Of the 2 M sequence reco...

Qualitative assignment of DNA degradation in vertebrate samples used for molecular taxonomic identification.

Manuel Alejandro Coba-Males (17598547)
Pablo Medrano-Vizcaíno (17598550)
Sandra Enríquez (16469765)
David Brito-Zapata (17598553)
Sarah Martin-Solano (13833648)
Sofía Ocaña-Mayorga (235322)
Gabriel Alberto Carrillo-Bilbao (17598556)
Wilmer Narváez (17598559)
Jaime Antonio Salas (17598562)
Jazzmín Arrivillaga-Henríquez (17598565)
Manuela González-Suárez (227359)
Ana Poveda (1889686)

December 2023

Qualitative assignment of DNA degradation in vertebrate samples used for molecular taxonomic identif...

List of all individual specimens used for genetic analyses, collection sites and GenBank accession codes.

Olga K. Klishko (744808)
Manuel Lopes-Lima (4517023)
Arthur E. Bogan (4517026)
Dmitry V. Matafonov (5076467)
Elsa Froufe (89196)

April 2018

<p>List of all individual specimens used for genetic analyses, collection sites and GenBank accessio...

Sampling localities, haplotype codes and GenBank accession numbers of specimens included in the phylogenetic analyses.

Ivana Buj (576249)
Radek Šanda (576250)
Zoran Marčić (576251)
Marko Ćaleta (576252)
Milorad Mrakovčić (576253)

June 2014

<p>Sampling localities, haplotype codes and GenBank accession numbers of specimens included in the p...

Table of collection localities and GenBank accession numbers

Scott M. Shreve (3261384)
Edward L. Mockford (3261381)
Kevin P. Johnson (684371)

October 2016

Table detailing collection locality and GenBank accession numbers for 12S and ND-5 sequences. "Speci...

Specimens for DNA analysis.

J. Berton C. Harris (212153)
Pamela C. Rasmussen (665071)
Ding Li Yong (212150)
Dewi M. Prawiradilaga (665072)
Dadang Dwi Putra (665073)
Philip D. Round (665074)
Frank E. Rheindt (197088)

November 2014

<p>Abbreviations: BMNHC – Burke Museum of Natural History and Culture (University of Washington, Sea...

Details of <i>Plasmodium</i> species detected using blood and tissue samples of <i>M</i>. <i>radiata</i> species.

Jyotsana Dixit (6058514)
Arun Zachariah (3260130)
Sajesh P. K. (5444063)
Bathrachalam Chandramohan (6058517)
Vinoth Shanmuganatham (6058520)
K. Praveen Karanth (146316)

December 2018

Details of Plasmodium species detected using blood and tissue samples of M. radiata species.</p

Data for: DNA barcoding and conservation of rattans in trade

Kuhnhäuser, Benedikt Georg

March 2023

Data for project DNA barcoding and conservation of rattans in trade (https://www.kew.org/science/our...

Collection information for specimens used in morphological and molecular analyses and GenBank accession numbers.

Camila F. Silva (4056871)
Victor C. Seixas (4056868)
Rômulo Barroso (3284088)
Maikon Di Domenico (4056862)
Antonia C. Z. Amaral (4056865)
Paulo C. Paiva (3284091)

May 2017

<p>Collection information for specimens used in morphological and molecular analyses and GenBank acc...

Specimen information for taxa included in this study with mitogenomic DNA sequence data.

Jan Yde Poulsen (453714)
Tetsuya Sado (453711)
Christoph Hahn (755455)
Ingvar Byrkjedal (2936463)
Masatoshi Moku (2936466)
Masaki Miya (68675)

August 2016

<p>Specimen information for taxa included in this study with mitogenomic DNA sequence data.</p

Sequencing information for the four <i>Tilia</i> species used in this study.

Jie Cai (389349)
Peng-Fei Ma (187879)
Hong-Tao Li (277766)
De-Zhu Li (128942)

November 2015

<p>Sequencing information for the four <i>Tilia</i> species used in this study.</p

Species and specimens used in the present study, with location, reference collection details, and GenBank accession numbers. Newly obtained sequenced in bold.

Sittiporn Parnmen (110727)
Robert Lücking (111695)
H. Thorsten Lumbsch (110741)

December 2012

<p>Species and specimens used in the present study, with location, reference collection details, and...

Termite specimens, COII Genbank accession numbers, taxonomical affiliations in OPTSIL clustering, and collection data.

Huxley M. Makonde (380019)
Hamadi I. Boga (380020)
Zipporah Osiemo (380021)
Romano Mwirichia (380022)
J. Benjamin Stielow (211598)
Markus Göker (65630)
Hans-Peter Klenk (158173)

February 2013

<p>Termite specimens, COII Genbank accession numbers, taxonomical affiliations in OPTSIL clustering,...

Summary of the number of specimen analyzed, the number of sequences produced, the sequencing type and taxonomic units obtained for each morphospecies.

Raphaël Morard (200006)
Nele M. Vollmar (5474657)
Mattia Greco (6495146)
Michal Kucera (303387)

March 2019

Summary of the number of specimen analyzed, the number of sequences produced, the sequencing type an...

Information for sample collection sites, voucher specimens, sequencing results and genome assembly.

Sung-Mo An (17124946)
Bo-Yun Kim (7060676)
Halam Kang (17124949)
Ha-Rim Lee (694846)
Yoo-Bin Lee (14100687)
Yoo-Jung Park (9707140)
Kyeong-Sik Cheon (4381912)
Kyung-Ah Kim (90998)

October 2023

Information for sample collection sites, voucher specimens, sequencing results and genome assembly.<...

Taxonomic information associated with specimen records and BINs on BOLD. Of the 2 M sequence records on BOLD, 1.81 M met the quality standards for a BIN assignment and they include representatives of 274 K BINs.

Sujeevan Ratnasingham (167085)
Paul D. N. Hebert (127093)

July 2013

<p>Taxonomic information associated with specimen records and BINs on BOLD. Of the 2 M sequence reco...

Qualitative assignment of DNA degradation in vertebrate samples used for molecular taxonomic identification.

Manuel Alejandro Coba-Males (17598547)
Pablo Medrano-Vizcaíno (17598550)
Sandra Enríquez (16469765)
David Brito-Zapata (17598553)
Sarah Martin-Solano (13833648)
Sofía Ocaña-Mayorga (235322)
Gabriel Alberto Carrillo-Bilbao (17598556)
Wilmer Narváez (17598559)
Jaime Antonio Salas (17598562)
Jazzmín Arrivillaga-Henríquez (17598565)
Manuela González-Suárez (227359)
Ana Poveda (1889686)

December 2023

Qualitative assignment of DNA degradation in vertebrate samples used for molecular taxonomic identif...

List of all individual specimens used for genetic analyses, collection sites and GenBank accession codes.

Olga K. Klishko (744808)
Manuel Lopes-Lima (4517023)
Arthur E. Bogan (4517026)
Dmitry V. Matafonov (5076467)
Elsa Froufe (89196)

April 2018

<p>List of all individual specimens used for genetic analyses, collection sites and GenBank accessio...

Sampling localities, haplotype codes and GenBank accession numbers of specimens included in the phylogenetic analyses.

Ivana Buj (576249)
Radek Šanda (576250)
Zoran Marčić (576251)
Marko Ćaleta (576252)
Milorad Mrakovčić (576253)

June 2014

<p>Sampling localities, haplotype codes and GenBank accession numbers of specimens included in the p...

Table of collection localities and GenBank accession numbers

Scott M. Shreve (3261384)
Edward L. Mockford (3261381)
Kevin P. Johnson (684371)

October 2016

Table detailing collection locality and GenBank accession numbers for 12S and ND-5 sequences. "Speci...

Specimens for DNA analysis.

J. Berton C. Harris (212153)
Pamela C. Rasmussen (665071)
Ding Li Yong (212150)
Dewi M. Prawiradilaga (665072)
Dadang Dwi Putra (665073)
Philip D. Round (665074)
Frank E. Rheindt (197088)

November 2014

<p>Abbreviations: BMNHC – Burke Museum of Natural History and Culture (University of Washington, Sea...

Details of <i>Plasmodium</i> species detected using blood and tissue samples of <i>M</i>. <i>radiata</i> species.

Jyotsana Dixit (6058514)
Arun Zachariah (3260130)
Sajesh P. K. (5444063)
Bathrachalam Chandramohan (6058517)
Vinoth Shanmuganatham (6058520)
K. Praveen Karanth (146316)

December 2018

Details of Plasmodium species detected using blood and tissue samples of M. radiata species.</p

Data for: DNA barcoding and conservation of rattans in trade

Kuhnhäuser, Benedikt Georg

March 2023

Data for project DNA barcoding and conservation of rattans in trade (https://www.kew.org/science/our...