Additional file 1: of Robustness of biomarker determination in breast cancer by RT-qPCR: impact of tumor cell content, DCIS and non-neoplastic breast tissue

Additional file 2: of Adipocytes promote breast cancer resistance to chemotherapy, a process amplified by obesity: role of the major vault protein (MVP)

Camille Lehuédé (6241601)
Xia Li (14984)
Stéphanie Dauvillier (6241604)
Charlotte Vaysse (6241607)
Camille Franchet (6241610)
Emily Clement (6241613)
David Esteve (183184)
Mélanie Longué (6241616)
Léonor Chaltiel (6241619)
Sophie Gonidec (6241622)
Ikrame Lazar (6241625)
Aline Geneste (6241628)
Charles Dumontet (193436)
Philippe Valet (231001)
Laurence Nieto (8668)
Frédérique Fallone (6241631)
Catherine Muller (231004)

January 2019

Table S1. Clinical characteristics of the patients with breast cancer and histopathological characte...

Additional file 1: of Adipocyte-derived IL-6 and leptin promote breast Cancer metastasis via upregulation of Lysyl Hydroxylase-2 expression

Jin-Yong He (6100892)
Xiao-Hui Wei (6100895)
Si-Jing Li (6100898)
Yang Liu (4829)
Hao-Lin Hu (6100901)
Zheng-Zheng Li (1637104)
Xin-Hong Kuang (6100904)
Lai Wang (23747)
Xin Shi (139139)
Sheng-Tao Yuan (6100907)
Li Sun (4624)

December 2018

Table S1. Sequences of the primers used to detect gene expression by qRT-PCR. Table S2. Characteriza...

Additional file 2: of Aberrant fatty acid profile and FFAR4 signaling confer endocrine resistance in breast cancer

Xiao Chu (168139)
Qi Zhou (7408)
Yingchun Xu (320157)
Jingting Jiang (52882)
Qing Li (84975)
Qianjun Zhou (6393770)
Qiong Wu (84327)
Min Jin (333526)
Hui Wang (30400)
Yuting Gu (838922)
Xue Wang (102830)
Bei Wang (116772)
Songbing He (527868)
Xiaozhou He (294364)
Changping Wu (52884)
Fengchun Zhang (309978)
Yanyun Zhang (145529)

February 2019

Table S1. Fatty Acid Quantities in Normal and Cancerous Breast Tissues. Table S2. Fatty Acid Proport...

Additional file 2: of Robustness of biomarker determination in breast cancer by RT-qPCR: impact of tumor cell content, DCIS and non-neoplastic breast tissue

Kerstin Hartmann (5876543)
Kornelia Schlombs (3583691)
Mark Laible (396335)
Claudia GĂźrtler (4018391)
Marcus Schmidt (58563)
Ugur Sahin (133198)
Hans-Anton Lehr (32405)

October 2018

MammatyperÂŽ Median Cq values are shown for the effect of adipose tissue. (XLSX 16 kb

Additional file 3: of Robustness of biomarker determination in breast cancer by RT-qPCR: impact of tumor cell content, DCIS and non-neoplastic breast tissue

Kerstin Hartmann (5876543)
Kornelia Schlombs (3583691)
Mark Laible (396335)
Claudia GĂźrtler (4018391)
Marcus Schmidt (58563)
Ugur Sahin (133198)
Hans-Anton Lehr (32405)

October 2018

MammatyperÂŽ relative gene expression and Î40-ddCq values are shown for the effect of TCC. (XLSX 13...

Additional file 4: of Robustness of biomarker determination in breast cancer by RT-qPCR: impact of tumor cell content, DCIS and non-neoplastic breast tissue

Kerstin Hartmann (5876543)
Kornelia Schlombs (3583691)
Mark Laible (396335)
Claudia Gürtler (4018337)
Marcus Schmidt (58563)
Ugur Sahin (133198)
Hans-Anton Lehr (32405)

October 2018

Mammatyper® relative gene expression and Δ40-ddCq values are shown for the effect of DCIS. Tumor cel...

Additional file 2: of Technical validation of an RT-qPCR in vitro diagnostic test system for the determination of breast cancer molecular subtypes by quantification of ERBB2, ESR1, PGR and MKI67 mRNA levels from formalin-fixed paraffin-embedded breast tumor specimens

Mark Laible (396335)
Kornelia Schlombs (3583691)
Katharina Kaiser (3583703)
Elke Veltrup (443872)
Stefanie Herlein (3583697)
Sotiris Lakis (749032)
Robert Stรถhr (3583706)
Sebastian Eidt (3583694)
Arndt Hartmann (42756)
Ralph Wirtz (3583688)
Ugur Sahin (133198)

July 2016

A: RNA and DNA concentrations in RNXtract eluates, B: Analyte specificity data, C: Graphical represe...

Additional file 3: of Assessing breast cancer cell lines as tumour models by comparison of mRNA expression profiles

Krista Vincent (3576728)
Scott Findlay (3576725)
Lynne Postovit (3576731)

August 2015

Top 1 % of differentially expressed genes between tumours and cell lines after filtering out genes c...

Additional file 3: of Selective isolation and characterization of primary cells from normal breast and tumors reveal plasticity of adipose derived stem cells

Annika Weigand (3474701)
Anja Boos (3474713)
Kereshmeh Tasbihi (3474710)
Justus Beier (3474704)
Paul Dalton (3474698)
Michael Schrauder (3474707)
Raymund Horch (3474716)
Matthias Beckmann (3425435)
Pamela Strissel (3474695)
Reiner Strick (189119)

March 2016

Gene expression of invasive and mesenchymal markers in cell isolates. Mammary epithelial cell (MEC),...

Additional file 4: of Assessing breast cancer cell lines as tumour models by comparison of mRNA expression profiles

Krista Vincent (3576728)
Scott Findlay (3576725)
Lynne Postovit (3576731)

August 2015

Comparison of the frequency of select mutational events in breast cancer tumours versus cell lines. ...

Additional file 2: of Assessing breast cancer cell lines as tumour models by comparison of mRNA expression profiles

Krista Vincent (3576728)
Scott Findlay (3576725)
Lynne Postovit (3576731)

August 2015

Top 1 % of differentially expressed genes between tumours and cell lines (with adjusted p values by ...

Additional file 6: of Transcriptomic dynamics of breast cancer progression in the MMTV-PyMT mouse model

Ying Cai (22305)
Ruben Nogales-Cadenas (3502262)
Quanwei Zhang (626046)
Jhih-Rong Lin (3502259)
Wen Zhang (7555)
Kelly OâBrien (3435863)
Cristina Montagna (201365)
Zhengdong Zhang (48217)

February 2017

Figure S5. qPCR verification and validation of gene expression. (A) qPCR verification using the same...

Additional file 1: of OSM potentiates preintravasation events, increases CTC counts, and promotes breast cancer metastasis to the lung

Ken Tawara (748035)
Celeste Bolin (5393150)
Jordan Koncinsky (5393135)
Sujatha Kadaba (5393144)
Hunter Covert (5393132)
Caleb Sutherland (3207948)
Laura Bond (3801250)
Joseph Kronz (5393147)
Joel Garbow (5393141)
Cheryl Jorcyk (5393138)

June 2018

Table S1. Primer and probe sequences used for qPCR assay for the detection of CTC in blood obtained ...

Additional file 5: of Obesity promotes the expansion of metastasis-initiating cells in breast cancer

Mélanie Bousquenaud (290102)
Flavia Fico (5719043)
Giovanni Solinas (2087422)
Curzio Rüegg (5520968)
Albert Santamaria-Martínez (238168)

September 2018

Figure S4. Western blot analysis for E-cadherin, N-cadherin, p21, and HIF1a in Py230-C57BL/6 tumor l...

Additional file 1: of Interaction with adipocyte stromal cells induces breast cancer malignancy via S100A7 upregulation in breast cancer microenvironment

Minako Sakurai (4126699)
Yasuhiro Miki (368958)
Kiyoshi Takagi (4126696)
Takashi Suzuki (8491)
Takanori Ishida (822205)
Noriaki Ohuchi (360735)
Hironobu Sasano (368960)

June 2017

Supplementary information with materials and methods for supplementary figures, legends of Figures S...

Additional file 2: of Adipocytes promote breast cancer resistance to chemotherapy, a process amplified by obesity: role of the major vault protein (MVP)

Camille Lehuédé (6241601)
Xia Li (14984)
Stéphanie Dauvillier (6241604)
Charlotte Vaysse (6241607)
Camille Franchet (6241610)
Emily Clement (6241613)
David Esteve (183184)
Mélanie Longué (6241616)
Léonor Chaltiel (6241619)
Sophie Gonidec (6241622)
Ikrame Lazar (6241625)
Aline Geneste (6241628)
Charles Dumontet (193436)
Philippe Valet (231001)
Laurence Nieto (8668)
Frédérique Fallone (6241631)
Catherine Muller (231004)

January 2019

Table S1. Clinical characteristics of the patients with breast cancer and histopathological characte...

Additional file 1: of Adipocyte-derived IL-6 and leptin promote breast Cancer metastasis via upregulation of Lysyl Hydroxylase-2 expression

Jin-Yong He (6100892)
Xiao-Hui Wei (6100895)
Si-Jing Li (6100898)
Yang Liu (4829)
Hao-Lin Hu (6100901)
Zheng-Zheng Li (1637104)
Xin-Hong Kuang (6100904)
Lai Wang (23747)
Xin Shi (139139)
Sheng-Tao Yuan (6100907)
Li Sun (4624)

December 2018

Table S1. Sequences of the primers used to detect gene expression by qRT-PCR. Table S2. Characteriza...

Additional file 2: of Aberrant fatty acid profile and FFAR4 signaling confer endocrine resistance in breast cancer

Xiao Chu (168139)
Qi Zhou (7408)
Yingchun Xu (320157)
Jingting Jiang (52882)
Qing Li (84975)
Qianjun Zhou (6393770)
Qiong Wu (84327)
Min Jin (333526)
Hui Wang (30400)
Yuting Gu (838922)
Xue Wang (102830)
Bei Wang (116772)
Songbing He (527868)
Xiaozhou He (294364)
Changping Wu (52884)
Fengchun Zhang (309978)
Yanyun Zhang (145529)

February 2019

Table S1. Fatty Acid Quantities in Normal and Cancerous Breast Tissues. Table S2. Fatty Acid Proport...

Additional file 2: of Robustness of biomarker determination in breast cancer by RT-qPCR: impact of tumor cell content, DCIS and non-neoplastic breast tissue

Kerstin Hartmann (5876543)
Kornelia Schlombs (3583691)
Mark Laible (396335)
Claudia GĂźrtler (4018391)
Marcus Schmidt (58563)
Ugur Sahin (133198)
Hans-Anton Lehr (32405)

October 2018

MammatyperÂŽ Median Cq values are shown for the effect of adipose tissue. (XLSX 16 kb

Additional file 3: of Robustness of biomarker determination in breast cancer by RT-qPCR: impact of tumor cell content, DCIS and non-neoplastic breast tissue

Kerstin Hartmann (5876543)
Kornelia Schlombs (3583691)
Mark Laible (396335)
Claudia GĂźrtler (4018391)
Marcus Schmidt (58563)
Ugur Sahin (133198)
Hans-Anton Lehr (32405)

October 2018

MammatyperÂŽ relative gene expression and Î40-ddCq values are shown for the effect of TCC. (XLSX 13...

Additional file 4: of Robustness of biomarker determination in breast cancer by RT-qPCR: impact of tumor cell content, DCIS and non-neoplastic breast tissue

Kerstin Hartmann (5876543)
Kornelia Schlombs (3583691)
Mark Laible (396335)
Claudia Gürtler (4018337)
Marcus Schmidt (58563)
Ugur Sahin (133198)
Hans-Anton Lehr (32405)

October 2018

Mammatyper® relative gene expression and Δ40-ddCq values are shown for the effect of DCIS. Tumor cel...

Additional file 2: of Technical validation of an RT-qPCR in vitro diagnostic test system for the determination of breast cancer molecular subtypes by quantification of ERBB2, ESR1, PGR and MKI67 mRNA levels from formalin-fixed paraffin-embedded breast tumor specimens

Mark Laible (396335)
Kornelia Schlombs (3583691)
Katharina Kaiser (3583703)
Elke Veltrup (443872)
Stefanie Herlein (3583697)
Sotiris Lakis (749032)
Robert Stรถhr (3583706)
Sebastian Eidt (3583694)
Arndt Hartmann (42756)
Ralph Wirtz (3583688)
Ugur Sahin (133198)

July 2016

A: RNA and DNA concentrations in RNXtract eluates, B: Analyte specificity data, C: Graphical represe...

Additional file 3: of Assessing breast cancer cell lines as tumour models by comparison of mRNA expression profiles

Krista Vincent (3576728)
Scott Findlay (3576725)
Lynne Postovit (3576731)

August 2015

Top 1 % of differentially expressed genes between tumours and cell lines after filtering out genes c...

Additional file 3: of Selective isolation and characterization of primary cells from normal breast and tumors reveal plasticity of adipose derived stem cells

Annika Weigand (3474701)
Anja Boos (3474713)
Kereshmeh Tasbihi (3474710)
Justus Beier (3474704)
Paul Dalton (3474698)
Michael Schrauder (3474707)
Raymund Horch (3474716)
Matthias Beckmann (3425435)
Pamela Strissel (3474695)
Reiner Strick (189119)

March 2016

Gene expression of invasive and mesenchymal markers in cell isolates. Mammary epithelial cell (MEC),...

Additional file 4: of Assessing breast cancer cell lines as tumour models by comparison of mRNA expression profiles

Krista Vincent (3576728)
Scott Findlay (3576725)
Lynne Postovit (3576731)

August 2015

Comparison of the frequency of select mutational events in breast cancer tumours versus cell lines. ...

Additional file 2: of Assessing breast cancer cell lines as tumour models by comparison of mRNA expression profiles

Krista Vincent (3576728)
Scott Findlay (3576725)
Lynne Postovit (3576731)

August 2015

Top 1 % of differentially expressed genes between tumours and cell lines (with adjusted p values by ...

Additional file 6: of Transcriptomic dynamics of breast cancer progression in the MMTV-PyMT mouse model

Ying Cai (22305)
Ruben Nogales-Cadenas (3502262)
Quanwei Zhang (626046)
Jhih-Rong Lin (3502259)
Wen Zhang (7555)
Kelly OâBrien (3435863)
Cristina Montagna (201365)
Zhengdong Zhang (48217)

February 2017

Figure S5. qPCR verification and validation of gene expression. (A) qPCR verification using the same...

Additional file 1: of OSM potentiates preintravasation events, increases CTC counts, and promotes breast cancer metastasis to the lung

Ken Tawara (748035)
Celeste Bolin (5393150)
Jordan Koncinsky (5393135)
Sujatha Kadaba (5393144)
Hunter Covert (5393132)
Caleb Sutherland (3207948)
Laura Bond (3801250)
Joseph Kronz (5393147)
Joel Garbow (5393141)
Cheryl Jorcyk (5393138)

June 2018

Table S1. Primer and probe sequences used for qPCR assay for the detection of CTC in blood obtained ...

Additional file 5: of Obesity promotes the expansion of metastasis-initiating cells in breast cancer

Mélanie Bousquenaud (290102)
Flavia Fico (5719043)
Giovanni Solinas (2087422)
Curzio Rüegg (5520968)
Albert Santamaria-Martínez (238168)

September 2018

Figure S4. Western blot analysis for E-cadherin, N-cadherin, p21, and HIF1a in Py230-C57BL/6 tumor l...

Additional file 1: of Interaction with adipocyte stromal cells induces breast cancer malignancy via S100A7 upregulation in breast cancer microenvironment

Minako Sakurai (4126699)
Yasuhiro Miki (368958)
Kiyoshi Takagi (4126696)
Takashi Suzuki (8491)
Takanori Ishida (822205)
Noriaki Ohuchi (360735)
Hironobu Sasano (368960)

June 2017

Supplementary information with materials and methods for supplementary figures, legends of Figures S...

Additional file 2: of Adipocytes promote breast cancer resistance to chemotherapy, a process amplified by obesity: role of the major vault protein (MVP)

Camille Lehuédé (6241601)
Xia Li (14984)
Stéphanie Dauvillier (6241604)
Charlotte Vaysse (6241607)
Camille Franchet (6241610)
Emily Clement (6241613)
David Esteve (183184)
Mélanie Longué (6241616)
Léonor Chaltiel (6241619)
Sophie Gonidec (6241622)
Ikrame Lazar (6241625)
Aline Geneste (6241628)
Charles Dumontet (193436)
Philippe Valet (231001)
Laurence Nieto (8668)
Frédérique Fallone (6241631)
Catherine Muller (231004)

January 2019

Table S1. Clinical characteristics of the patients with breast cancer and histopathological characte...

Additional file 1: of Adipocyte-derived IL-6 and leptin promote breast Cancer metastasis via upregulation of Lysyl Hydroxylase-2 expression

Jin-Yong He (6100892)
Xiao-Hui Wei (6100895)
Si-Jing Li (6100898)
Yang Liu (4829)
Hao-Lin Hu (6100901)
Zheng-Zheng Li (1637104)
Xin-Hong Kuang (6100904)
Lai Wang (23747)
Xin Shi (139139)
Sheng-Tao Yuan (6100907)
Li Sun (4624)

December 2018

Table S1. Sequences of the primers used to detect gene expression by qRT-PCR. Table S2. Characteriza...

Additional file 2: of Aberrant fatty acid profile and FFAR4 signaling confer endocrine resistance in breast cancer

Xiao Chu (168139)
Qi Zhou (7408)
Yingchun Xu (320157)
Jingting Jiang (52882)
Qing Li (84975)
Qianjun Zhou (6393770)
Qiong Wu (84327)
Min Jin (333526)
Hui Wang (30400)
Yuting Gu (838922)
Xue Wang (102830)
Bei Wang (116772)
Songbing He (527868)
Xiaozhou He (294364)
Changping Wu (52884)
Fengchun Zhang (309978)
Yanyun Zhang (145529)

February 2019

Table S1. Fatty Acid Quantities in Normal and Cancerous Breast Tissues. Table S2. Fatty Acid Proport...

Additional file 1: of Robustness of biomarker determination in breast cancer by RT-qPCR: impact of tumor cell content, DCIS and non-neoplastic breast tissue

Abstract

Extracted data

Additional file 1: of Robustness of biomarker determination in breast cancer by RT-qPCR: impact of tumor cell content, DCIS and non-neoplastic breast tissue

Abstract

Extracted data

Related items

Related items