Figure S9. Comparison of prevalence and mean relative abundance between NA-OTUs, PA-OTUs (strictly positive, PA; strictly negative, NA), and non-biomarkers. Mean relative abundances were scaled by taking their square root. (A) Sample quantities calculated across all samples. (B) Sample quantities stratified by body site, where PA- and NA-OTUs only include biomarkers for each respective body site. (PDF 3389 kb
Boxplot of the top 20 taxa across studies not including the Yatsunenko study. The dark horizontal li...
NMDS plots using the Bray distance metric with all the samples except for the Yatsunenko study sampl...
Relative abundance of taxonomic groups present at each body site. Taxa included in this display are ...
Figure S7. Overlaps of identified biomarker OTUs between body sites. Diagonal: distribution of PA-OT...
Table S5. Comprehensive information of all biomarker OTUs, including marker association types, marke...
Table S1. Top 5 most important positively associated biomarker genera per body site, measured by max...
Figure S6. Prediction performance across body sites for RFC-global vs. RFC-single, as well as all OT...
Figure S1. Comparison of OTU importance between RFC-global and RFC-single. (A) Overlap of predictive...
Figure S10. Additional performance comparisons of RFC-global. (A) Comparison of RFC-global to a clas...
Figure S5. Comparison of discrimination performance between RFC-global with all OTUs and only biomar...
Figure S4. Comparison of discrimination performance between RFC-global and RFC-single on mixed sampl...
Figure S11. Improvement of RFC-global performance with increasing numbers of studies and samples. “u...
Table S4. Accessions for sequencing runs, sequencing samples, and projects contained in GlobalBodysi...
Figure S3. Discrimination performance of RFC-global on mixed samples. Along a gradient of increasing...
Prevotella distributions within each population. The x-axis represents the sample quantiles and all ...
Boxplot of the top 20 taxa across studies not including the Yatsunenko study. The dark horizontal li...
NMDS plots using the Bray distance metric with all the samples except for the Yatsunenko study sampl...
Relative abundance of taxonomic groups present at each body site. Taxa included in this display are ...
Figure S7. Overlaps of identified biomarker OTUs between body sites. Diagonal: distribution of PA-OT...
Table S5. Comprehensive information of all biomarker OTUs, including marker association types, marke...
Table S1. Top 5 most important positively associated biomarker genera per body site, measured by max...
Figure S6. Prediction performance across body sites for RFC-global vs. RFC-single, as well as all OT...
Figure S1. Comparison of OTU importance between RFC-global and RFC-single. (A) Overlap of predictive...
Figure S10. Additional performance comparisons of RFC-global. (A) Comparison of RFC-global to a clas...
Figure S5. Comparison of discrimination performance between RFC-global with all OTUs and only biomar...
Figure S4. Comparison of discrimination performance between RFC-global and RFC-single on mixed sampl...
Figure S11. Improvement of RFC-global performance with increasing numbers of studies and samples. “u...
Table S4. Accessions for sequencing runs, sequencing samples, and projects contained in GlobalBodysi...
Figure S3. Discrimination performance of RFC-global on mixed samples. Along a gradient of increasing...
Prevotella distributions within each population. The x-axis represents the sample quantiles and all ...
Boxplot of the top 20 taxa across studies not including the Yatsunenko study. The dark horizontal li...
NMDS plots using the Bray distance metric with all the samples except for the Yatsunenko study sampl...
Relative abundance of taxonomic groups present at each body site. Taxa included in this display are ...