Additional file 3: of High-definition neural visualization of rodent brain using micro-CT scanning and non-local-means processing

Dataset of microscope images of prefrontal cortex from wistar rat tissue after an induced stroke for image registration and stitching

Bladimir. Salas-Quinchucua
Jean P. Díaz-Paz
Humberto Loaiza-Correa
John Umbarila-Prieto

June 2021

This article presents a dataset of raw microscopic images of the prefrontal cortex from wistar rat t...

Additional file 1: Figure S1. of Interleukin-1β signaling in fenestrated capillaries is sufficient to trigger sickness responses in mice

J. Gabriel Knoll (4584304)
Stephanie Krasnow (4219180)
Daniel Marks (3628709)

November 2017

Vascular heterogeneity in the mouse brain. (A-D) Cd31 IR in epifluorescent digital montages of repre...

Additional file 1: of Peripheral myeloid cells contribute to brain injury in male neonatal mice

Peter Smith (239008)
Amin Mottahedin (501488)
Pernilla Svedin (5913737)
Carl-Johan Mohn (5913740)
Henrik Hagberg (190479)
Joakim Ek (4709182)
Carina Mallard (121566)

October 2018

Figure S1. EGFP+ myeloid cell localisation in the brain after HI. Representative tile-scanned confoc...

Additional file 2: of High-definition neural visualization of rodent brain using micro-CT scanning and non-local-means processing

Ko-Chin Chen (5913758)
Alon Arad (5913761)
Zan-Ming Song (5913764)
David Croaker (5913767)

October 2018

Figure S1. Rat pup head after the removal of fur and creation of rhomb-shaped opening in skull for s...

High-definition neural visualization of rodent brain using micro-CT scanning and non-local-means processing

Ko-Chin Chen
Alon Arad
Zan-Ming Song
David Croaker

October 2018

Abstract Background Micro-CT holds promising potential for phenotyping and histological purposes. Ho...

Diagnostic Imaging Using Micro-CT: Sequential and Comparative Evaluation of Rodent Models for Hepatic/Brain Ischemia and Stroke

Hayasaka Naoto
Nagai Nobuo
Kawao Naoyuki
Niwa Atsuko
Yoshioka Yoshichika
Mori Yuki
Shigeta Hiroshi
Kashiwagi Nobuo
Miyazawa Masaaki
Satou Takao
Higashino Hideaki
Matsuo Osamu
Murakami Takamichi

February 2012

There is an increasing need for animal disease models for pathophysiological research and efficient ...

Additional file 9 of Silica-coated magnetic nanoparticles activate microglia and induce neurotoxic d-serine secretion

Tae Hwan Shin (5472662)
Da Yeon Lee (9971574)
Balachandran Manavalan (204735)
Shaherin Basith (122031)
Yun-Cheol Na (2222263)
Cheolho Yoon (2588590)
Hyeon-Seong Lee (7140254)
Man Jeong Paik (574981)
Gwang Lee (9971580)

August 2021

Additional file 9: Supplementary Figure 3. Characterization of primary rat neuronal cells and microg...

Additional file 1: of Diffusion-weighted magnetic resonance imaging using a preclinical 1 T PET/MRI in healthy and tumor-bearing rats

Jakob Albrecht (6393776)
Dietrich Polenz (6393779)
Anja Kühl (23410)
Julian Rogasch (5173727)
Annekatrin Leder (6393782)
Igor Sauer (389103)
Magor Babos (336070)
Gabor Mócsai (6393785)
Nicola Beindorff (6393788)
Ingo Steffen (51774)
Winfried Brenner (636428)
Eva Koziolek (4329832)

February 2019

Immunohistochemic staining of liver parenchyma from tumor-bearing rats 1–4 and one healthy rat. (DOC...

In vivo diagnostic imaging using micro-CT: sequential and comparative evaluation of rodent models for hepatic/brain ischemia and stroke.

Naoto Hayasaka
Nobuo Nagai
Naoyuki Kawao
Atsuko Niwa
Yoshichika Yoshioka
Yuki Mori
Hiroshi Shigeta
Nobuo Kashiwagi
Masaaki Miyazawa
Takao Satou
Hideaki Higashino
Osamu Matsuo
Takamichi Murakami

BACKGROUND: There is an increasing need for animal disease models for pathophysiological research an...

Additional file: 6 of Application of NeuroTrace staining in the fresh frozen brain samples to laser microdissection combined with quantitative RT-PCR analysis

Seico Benner (3423686)
Masaki Kakeyama (111074)
Toshihiro Endo (111073)
Wataru Yoshioka (3423683)
Chiharu Tohyama (111093)

June 2015

Figure S6. NeuroTrace-stained specimens (A) unfixed, under (A1) a bright field and under (A2) a fluo...

Additional file: 2 of Application of NeuroTrace staining in the fresh frozen brain samples to laser microdissection combined with quantitative RT-PCR analysis

Seico Benner (3423686)
Masaki Kakeyama (111074)
Toshihiro Endo (111073)
Wataru Yoshioka (3423683)
Chiharu Tohyama (111093)

June 2015

Figure S2. The hippocampal area in (A) unfixed and unstained, (B) ethanol-fixed, and (C) ethanol-fix...

Additional file 10: of Light sheet theta microscopy for rapid high-resolution imaging of large biological samples

Bianca Migliori (5106401)
Malika Datta (5314703)
Christophe Dupre (5106407)
Mehmet Apak (5314700)
Shoh Asano (5106404)
Ruixuan Gao (1572088)
Edward Boyden (5314697)
Ola Hermanson (109038)
Rafael Yuste (53309)
Raju Tomer (634803)

May 2018

Video 5. Visualization of an image stack of vasculature-stained rat brain tissue. This video visuali...

In Vivo Diagnostic Imaging Using Micro-CT: Sequential and Comparative Evaluation of Rodent Models for Hepatic/Brain Ischemia and Stroke

Naoto Hayasaka
Nobuo Nagai
Naoyuki Kawao
Atsuko Niwa
Yoshichika Yoshioka
Yuki Mori
Hiroshi Shigeta
Nobuo Kashiwagi
Masaaki Miyazawa
Takao Satou
Hideaki Higashino
Matsuo Takamichi Murakami

August 2016

Background: There is an increasing need for animal disease models for pathophysiological research an...

Additional file 3: of Diabetic encephalopathy: beneficial effects of supplementation with fatty acids ω3 and nordihydroguaiaretic acid in a spontaneous diabetes rat model

Gustavo Díaz-Gerevini (6318002)
Alejandro Daín (6318005)
María Pasqualini (6318008)
Cristina López (2841392)
Aldo Eynard (6318011)
Gastón Repossi (6318014)

February 2019

Images of brain CT scans of rats under different experimental treatments and densitometric analysis ...

Additional file 1: of Complement component 3 (C3) expression in the hippocampus after excitotoxic injury: role of C/EBPβ

Elena Hernandez-Encinas (3511853)
Diana Aguilar-Morante (237970)
Jose Morales-Garcia (3511850)
Elena Gine (3511847)
Marina Sanz-SanCristobal (237979)
Angel Santos (237981)
Ana Perez-Castillo (237983)

October 2016

Double-immunofluorescence analysis showing C3 expression near microglia and blood vessels 72 h after...

Dataset of microscope images of prefrontal cortex from wistar rat tissue after an induced stroke for image registration and stitching

Bladimir. Salas-Quinchucua
Jean P. Díaz-Paz
Humberto Loaiza-Correa
John Umbarila-Prieto

June 2021

This article presents a dataset of raw microscopic images of the prefrontal cortex from wistar rat t...

Additional file 1: Figure S1. of Interleukin-1β signaling in fenestrated capillaries is sufficient to trigger sickness responses in mice

J. Gabriel Knoll (4584304)
Stephanie Krasnow (4219180)
Daniel Marks (3628709)

November 2017

Vascular heterogeneity in the mouse brain. (A-D) Cd31 IR in epifluorescent digital montages of repre...

Additional file 1: of Peripheral myeloid cells contribute to brain injury in male neonatal mice

Peter Smith (239008)
Amin Mottahedin (501488)
Pernilla Svedin (5913737)
Carl-Johan Mohn (5913740)
Henrik Hagberg (190479)
Joakim Ek (4709182)
Carina Mallard (121566)

October 2018

Figure S1. EGFP+ myeloid cell localisation in the brain after HI. Representative tile-scanned confoc...

Additional file 2: of High-definition neural visualization of rodent brain using micro-CT scanning and non-local-means processing

Ko-Chin Chen (5913758)
Alon Arad (5913761)
Zan-Ming Song (5913764)
David Croaker (5913767)

October 2018

Figure S1. Rat pup head after the removal of fur and creation of rhomb-shaped opening in skull for s...

High-definition neural visualization of rodent brain using micro-CT scanning and non-local-means processing

Ko-Chin Chen
Alon Arad
Zan-Ming Song
David Croaker

October 2018

Abstract Background Micro-CT holds promising potential for phenotyping and histological purposes. Ho...

Diagnostic Imaging Using Micro-CT: Sequential and Comparative Evaluation of Rodent Models for Hepatic/Brain Ischemia and Stroke

Hayasaka Naoto
Nagai Nobuo
Kawao Naoyuki
Niwa Atsuko
Yoshioka Yoshichika
Mori Yuki
Shigeta Hiroshi
Kashiwagi Nobuo
Miyazawa Masaaki
Satou Takao
Higashino Hideaki
Matsuo Osamu
Murakami Takamichi

February 2012

There is an increasing need for animal disease models for pathophysiological research and efficient ...

Additional file 9 of Silica-coated magnetic nanoparticles activate microglia and induce neurotoxic d-serine secretion

Tae Hwan Shin (5472662)
Da Yeon Lee (9971574)
Balachandran Manavalan (204735)
Shaherin Basith (122031)
Yun-Cheol Na (2222263)
Cheolho Yoon (2588590)
Hyeon-Seong Lee (7140254)
Man Jeong Paik (574981)
Gwang Lee (9971580)

August 2021

Additional file 9: Supplementary Figure 3. Characterization of primary rat neuronal cells and microg...

Additional file 1: of Diffusion-weighted magnetic resonance imaging using a preclinical 1 T PET/MRI in healthy and tumor-bearing rats

Jakob Albrecht (6393776)
Dietrich Polenz (6393779)
Anja Kühl (23410)
Julian Rogasch (5173727)
Annekatrin Leder (6393782)
Igor Sauer (389103)
Magor Babos (336070)
Gabor Mócsai (6393785)
Nicola Beindorff (6393788)
Ingo Steffen (51774)
Winfried Brenner (636428)
Eva Koziolek (4329832)

February 2019

Immunohistochemic staining of liver parenchyma from tumor-bearing rats 1–4 and one healthy rat. (DOC...

In vivo diagnostic imaging using micro-CT: sequential and comparative evaluation of rodent models for hepatic/brain ischemia and stroke.

Naoto Hayasaka
Nobuo Nagai
Naoyuki Kawao
Atsuko Niwa
Yoshichika Yoshioka
Yuki Mori
Hiroshi Shigeta
Nobuo Kashiwagi
Masaaki Miyazawa
Takao Satou
Hideaki Higashino
Osamu Matsuo
Takamichi Murakami

BACKGROUND: There is an increasing need for animal disease models for pathophysiological research an...

Additional file: 6 of Application of NeuroTrace staining in the fresh frozen brain samples to laser microdissection combined with quantitative RT-PCR analysis

Seico Benner (3423686)
Masaki Kakeyama (111074)
Toshihiro Endo (111073)
Wataru Yoshioka (3423683)
Chiharu Tohyama (111093)

June 2015

Figure S6. NeuroTrace-stained specimens (A) unfixed, under (A1) a bright field and under (A2) a fluo...

Additional file: 2 of Application of NeuroTrace staining in the fresh frozen brain samples to laser microdissection combined with quantitative RT-PCR analysis

Seico Benner (3423686)
Masaki Kakeyama (111074)
Toshihiro Endo (111073)
Wataru Yoshioka (3423683)
Chiharu Tohyama (111093)

June 2015

Figure S2. The hippocampal area in (A) unfixed and unstained, (B) ethanol-fixed, and (C) ethanol-fix...

Additional file 10: of Light sheet theta microscopy for rapid high-resolution imaging of large biological samples

Bianca Migliori (5106401)
Malika Datta (5314703)
Christophe Dupre (5106407)
Mehmet Apak (5314700)
Shoh Asano (5106404)
Ruixuan Gao (1572088)
Edward Boyden (5314697)
Ola Hermanson (109038)
Rafael Yuste (53309)
Raju Tomer (634803)

May 2018

Video 5. Visualization of an image stack of vasculature-stained rat brain tissue. This video visuali...

In Vivo Diagnostic Imaging Using Micro-CT: Sequential and Comparative Evaluation of Rodent Models for Hepatic/Brain Ischemia and Stroke

Naoto Hayasaka
Nobuo Nagai
Naoyuki Kawao
Atsuko Niwa
Yoshichika Yoshioka
Yuki Mori
Hiroshi Shigeta
Nobuo Kashiwagi
Masaaki Miyazawa
Takao Satou
Hideaki Higashino
Matsuo Takamichi Murakami

August 2016

Background: There is an increasing need for animal disease models for pathophysiological research an...

Additional file 3: of Diabetic encephalopathy: beneficial effects of supplementation with fatty acids ω3 and nordihydroguaiaretic acid in a spontaneous diabetes rat model

Gustavo Díaz-Gerevini (6318002)
Alejandro Daín (6318005)
María Pasqualini (6318008)
Cristina López (2841392)
Aldo Eynard (6318011)
Gastón Repossi (6318014)

February 2019

Images of brain CT scans of rats under different experimental treatments and densitometric analysis ...

Additional file 1: of Complement component 3 (C3) expression in the hippocampus after excitotoxic injury: role of C/EBPβ

Elena Hernandez-Encinas (3511853)
Diana Aguilar-Morante (237970)
Jose Morales-Garcia (3511850)
Elena Gine (3511847)
Marina Sanz-SanCristobal (237979)
Angel Santos (237981)
Ana Perez-Castillo (237983)

October 2016

Double-immunofluorescence analysis showing C3 expression near microglia and blood vessels 72 h after...

Dataset of microscope images of prefrontal cortex from wistar rat tissue after an induced stroke for image registration and stitching

Bladimir. Salas-Quinchucua
Jean P. Díaz-Paz
Humberto Loaiza-Correa
John Umbarila-Prieto

June 2021

This article presents a dataset of raw microscopic images of the prefrontal cortex from wistar rat t...

Additional file 1: Figure S1. of Interleukin-1β signaling in fenestrated capillaries is sufficient to trigger sickness responses in mice

J. Gabriel Knoll (4584304)
Stephanie Krasnow (4219180)
Daniel Marks (3628709)

November 2017

Vascular heterogeneity in the mouse brain. (A-D) Cd31 IR in epifluorescent digital montages of repre...

Additional file 1: of Peripheral myeloid cells contribute to brain injury in male neonatal mice

Peter Smith (239008)
Amin Mottahedin (501488)
Pernilla Svedin (5913737)
Carl-Johan Mohn (5913740)
Henrik Hagberg (190479)
Joakim Ek (4709182)
Carina Mallard (121566)

October 2018

Figure S1. EGFP+ myeloid cell localisation in the brain after HI. Representative tile-scanned confoc...

Additional file 3: of High-definition neural visualization of rodent brain using micro-CT scanning and non-local-means processing

Abstract

Extracted data

Additional file 3: of High-definition neural visualization of rodent brain using micro-CT scanning and non-local-means processing

Abstract

Extracted data

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