Additional file 8: of New insights into the evolution and functional divergence of the SWEET family in Saccharum based on comparative genomics

Additional file 1: of Organization and evolution of the chalcone synthase gene family in bread wheat and relative species

Anastasia Glagoleva (6477974)
Nikita Ivanisenko (472058)
Elena Khlestkina (3488792)

March 2019

Intra-chromosomal localization of the Chs genes within the homoeologous group 2 chromosomes derived ...

Additional file 16: of Dissection of the molecular bases of genotype x environment interactions: a study of phenotypic plasticity of Saccharomyces cerevisiae in grape juices

Emilien Peltier (4781766)
Vikas Sharma (179393)
Maria MartĂ Raga (5947913)
Miguel Roncoroni (5947916)
Margaux Bernard (4781757)
Vladimir Jiranek (696240)
Yves Gibon (4074)
Philippe Marullo (462231)

November 2018

Primers information and reaction condition for microsatellite genotyping. (XLSX 12 kb

Additional file 9: of Genome-wide identification of MST, SUT and SWEET family sugar transporters in root parasitic angiosperms and analysis of their expression during host parasitism

Vikram Misra (470450)
Eric Wafula (4476616)
Yu Wang (12152)
Claude dePamphilis (3246285)
Michael Timko (4612192)

May 2019

Maximum likelihood tree of the SWEET genes, with heat map and domain architectures. Note the strong ...

Additional file 4: of New insights into the evolution and functional divergence of the SWEET family in Saccharum based on comparative genomics

Weichang Hu (3503660)
Xiuting Hua (3771160)
Qing Zhang (1802)
Jianping Wang (215292)
Qiaochu Shen (5944217)
Xingtan Zhang (694798)
Kai Wang (21246)
Qingyi Yu (734375)
Yann-Rong Lin (3169416)
Ray Ming (591215)
Jisen Zhang (3445649)

November 2018

An unrooted tree using SWEET amino acid sequences from sugarcane, sorghum, maize and rice SWEET gene...

Additional file 5: of New insights into the evolution and functional divergence of the SWEET family in Saccharum based on comparative genomics

Weichang Hu (3503660)
Xiuting Hua (3771160)
Qing Zhang (1802)
Jianping Wang (215292)
Qiaochu Shen (5944217)
Xingtan Zhang (694798)
Kai Wang (21246)
Qingyi Yu (734375)
Yann-Rong Lin (3169416)
Ray Ming (591215)
Jisen Zhang (3445649)

November 2018

A RT-qPCR verification of SWEET2b and SWEET4b in partial tissues of two Saccharum species. Note: IN,...

Additional file 3: of New insights into the evolution and functional divergence of the SWEET family in Saccharum based on comparative genomics

Weichang Hu (3503660)
Xiuting Hua (3771160)
Qing Zhang (1802)
Jianping Wang (215292)
Qiaochu Shen (5944217)
Xingtan Zhang (694798)
Kai Wang (21246)
Qingyi Yu (734375)
Yann-Rong Lin (3169416)
Ray Ming (591215)
Jisen Zhang (3445649)

November 2018

A schematic diagram for the relationship of the four clades of the phylogenetic tree constructed by ...

Additional file 9: of Evolution and expression of the fructokinase gene family in Saccharum

Yihong Chen (2013736)
Qing Zhang (1802)
Weichang Hu (3503660)
Xingtan Zhang (694798)
Liming Wang (114648)
Xiuting Hua (3771160)
Qingyi Yu (734375)
Ray Ming (591215)
Jisen Zhang (3445649)

February 2017

The primers for qRT-PCR verification of five SsFRK in four Saccharum species. (DOC 29 kb

New insights into the evolution and functional divergence of the SWEET family in Saccharum based on comparative genomics

Weichang Hu
Xiuting Hua
Qing Zhang
Jianping Wang
Qiaochu Shen
Xingtan Zhang
Kai Wang
Qingyi Yu
Yann-Rong Lin
Ray Ming
Jisen Zhang

November 2018

Abstract Background The SWEET (Sugars Will Eventually be Exported Transporters) gene family is a rec...

Additional file 3: of Evolution and expression of the fructokinase gene family in Saccharum

Yihong Chen (2013736)
Qing Zhang (1802)
Weichang Hu (3503660)
Xingtan Zhang (694798)
Liming Wang (114648)
Xiuting Hua (3771160)
Qingyi Yu (734375)
Ray Ming (591215)
Jisen Zhang (3445649)

February 2017

Comparison of gene expression levels of SsFRK gene family members by qRT-PCR and RNA-Seq. PM: premat...

Additional file 16: of Genome-wide identification of MST, SUT and SWEET family sugar transporters in root parasitic angiosperms and analysis of their expression during host parasitism

Vikram Misra (470450)
Eric Wafula (4476616)
Yu Wang (12152)
Claude dePamphilis (3246285)
Michael Timko (4612192)

May 2019

The clades with which each orthogroup is most strongly associated. These orthogroups were identified...

Additional file 5: of A genome-wide analysis of SWEET gene family in cotton and their expressions under different stresses

Lanjie ZHAO (5590889)
Jinbo YAO (5590892)
Wei CHEN (2902277)
Yan LI (5590895)
Youjun LĂ (5590898)
Yan GUO (5590901)
Junyi WANG (5590904)
Li YUAN (5590907)
Ziyang LIU (5590910)
Yongshan ZHANG (5590913)

August 2018

Table S4. The paralogous pairs of SWEET genes in G. arboreum, G. raimondii, G. hirsutum, and G. barb...

Additional file 7: of Evolution and expression of the fructokinase gene family in Saccharum

Yihong Chen (2013736)
Qing Zhang (1802)
Weichang Hu (3503660)
Xingtan Zhang (694798)
Liming Wang (114648)
Xiuting Hua (3771160)
Qingyi Yu (734375)
Ray Ming (591215)
Jisen Zhang (3445649)

February 2017

Heatmap of the expression levels of SsFRK gene family members under Et treatment. SR: S. robustum Mo...

Additional file 17: of Genome-wide identification of MST, SUT and SWEET family sugar transporters in root parasitic angiosperms and analysis of their expression during host parasitism

Vikram Misra (470450)
Eric Wafula (4476616)
Yu Wang (12152)
Claude dePamphilis (3246285)
Michael Timko (4612192)

May 2019

Every sugar transporter gene, their strongest stage of expression, clade and orthogroup. The clade, ...

Additional file 7: of Comparative genomics revealed the gene evolution and functional divergence of magnesium transporter families in Saccharum

Yongjun Wang (134570)
Xiuting Hua (3771160)
Jingsheng Xu (184529)
Zhichang Chen (6262175)
Tianqu Fan (6262178)
Zhaohui Zeng (6262181)
Hengbo Wang (6262184)
Ai-Ling Hour (114314)
Qingyi Yu (734375)
Ray Ming (591215)
Jisen Zhang (3445649)

January 2019

A schematic diagram for the relationship of the 5 clades of the phylogenetic tree constructed by NJ ...

Additional file 8: Table S24. of Association of variation in the sugarcane transcriptome with sugar content

Prathima Thirugnanasambandam (4041584)
Nam Hoang (4041575)
Agnelo Furtado (1823)
Frederick Botha (4616092)
Robert Henry (108785)

November 2017

Common and unique transcripts between LST vs LSB and HSB vs LSB (SoGI-DGE). Table S25 Common and uni...

Additional file 1: of Organization and evolution of the chalcone synthase gene family in bread wheat and relative species

Anastasia Glagoleva (6477974)
Nikita Ivanisenko (472058)
Elena Khlestkina (3488792)

March 2019

Intra-chromosomal localization of the Chs genes within the homoeologous group 2 chromosomes derived ...

Additional file 16: of Dissection of the molecular bases of genotype x environment interactions: a study of phenotypic plasticity of Saccharomyces cerevisiae in grape juices

Emilien Peltier (4781766)
Vikas Sharma (179393)
Maria MartĂ Raga (5947913)
Miguel Roncoroni (5947916)
Margaux Bernard (4781757)
Vladimir Jiranek (696240)
Yves Gibon (4074)
Philippe Marullo (462231)

November 2018

Primers information and reaction condition for microsatellite genotyping. (XLSX 12 kb

Additional file 9: of Genome-wide identification of MST, SUT and SWEET family sugar transporters in root parasitic angiosperms and analysis of their expression during host parasitism

Vikram Misra (470450)
Eric Wafula (4476616)
Yu Wang (12152)
Claude dePamphilis (3246285)
Michael Timko (4612192)

May 2019

Maximum likelihood tree of the SWEET genes, with heat map and domain architectures. Note the strong ...

Additional file 4: of New insights into the evolution and functional divergence of the SWEET family in Saccharum based on comparative genomics

Weichang Hu (3503660)
Xiuting Hua (3771160)
Qing Zhang (1802)
Jianping Wang (215292)
Qiaochu Shen (5944217)
Xingtan Zhang (694798)
Kai Wang (21246)
Qingyi Yu (734375)
Yann-Rong Lin (3169416)
Ray Ming (591215)
Jisen Zhang (3445649)

November 2018

An unrooted tree using SWEET amino acid sequences from sugarcane, sorghum, maize and rice SWEET gene...

Additional file 5: of New insights into the evolution and functional divergence of the SWEET family in Saccharum based on comparative genomics

Weichang Hu (3503660)
Xiuting Hua (3771160)
Qing Zhang (1802)
Jianping Wang (215292)
Qiaochu Shen (5944217)
Xingtan Zhang (694798)
Kai Wang (21246)
Qingyi Yu (734375)
Yann-Rong Lin (3169416)
Ray Ming (591215)
Jisen Zhang (3445649)

November 2018

A RT-qPCR verification of SWEET2b and SWEET4b in partial tissues of two Saccharum species. Note: IN,...

Additional file 3: of New insights into the evolution and functional divergence of the SWEET family in Saccharum based on comparative genomics

Weichang Hu (3503660)
Xiuting Hua (3771160)
Qing Zhang (1802)
Jianping Wang (215292)
Qiaochu Shen (5944217)
Xingtan Zhang (694798)
Kai Wang (21246)
Qingyi Yu (734375)
Yann-Rong Lin (3169416)
Ray Ming (591215)
Jisen Zhang (3445649)

November 2018

A schematic diagram for the relationship of the four clades of the phylogenetic tree constructed by ...

Additional file 9: of Evolution and expression of the fructokinase gene family in Saccharum

Yihong Chen (2013736)
Qing Zhang (1802)
Weichang Hu (3503660)
Xingtan Zhang (694798)
Liming Wang (114648)
Xiuting Hua (3771160)
Qingyi Yu (734375)
Ray Ming (591215)
Jisen Zhang (3445649)

February 2017

The primers for qRT-PCR verification of five SsFRK in four Saccharum species. (DOC 29 kb

New insights into the evolution and functional divergence of the SWEET family in Saccharum based on comparative genomics

Weichang Hu
Xiuting Hua
Qing Zhang
Jianping Wang
Qiaochu Shen
Xingtan Zhang
Kai Wang
Qingyi Yu
Yann-Rong Lin
Ray Ming
Jisen Zhang

November 2018

Abstract Background The SWEET (Sugars Will Eventually be Exported Transporters) gene family is a rec...

Additional file 3: of Evolution and expression of the fructokinase gene family in Saccharum

Yihong Chen (2013736)
Qing Zhang (1802)
Weichang Hu (3503660)
Xingtan Zhang (694798)
Liming Wang (114648)
Xiuting Hua (3771160)
Qingyi Yu (734375)
Ray Ming (591215)
Jisen Zhang (3445649)

February 2017

Comparison of gene expression levels of SsFRK gene family members by qRT-PCR and RNA-Seq. PM: premat...

Additional file 16: of Genome-wide identification of MST, SUT and SWEET family sugar transporters in root parasitic angiosperms and analysis of their expression during host parasitism

Vikram Misra (470450)
Eric Wafula (4476616)
Yu Wang (12152)
Claude dePamphilis (3246285)
Michael Timko (4612192)

May 2019

The clades with which each orthogroup is most strongly associated. These orthogroups were identified...

Additional file 5: of A genome-wide analysis of SWEET gene family in cotton and their expressions under different stresses

Lanjie ZHAO (5590889)
Jinbo YAO (5590892)
Wei CHEN (2902277)
Yan LI (5590895)
Youjun LĂ (5590898)
Yan GUO (5590901)
Junyi WANG (5590904)
Li YUAN (5590907)
Ziyang LIU (5590910)
Yongshan ZHANG (5590913)

August 2018

Table S4. The paralogous pairs of SWEET genes in G. arboreum, G. raimondii, G. hirsutum, and G. barb...

Additional file 7: of Evolution and expression of the fructokinase gene family in Saccharum

Yihong Chen (2013736)
Qing Zhang (1802)
Weichang Hu (3503660)
Xingtan Zhang (694798)
Liming Wang (114648)
Xiuting Hua (3771160)
Qingyi Yu (734375)
Ray Ming (591215)
Jisen Zhang (3445649)

February 2017

Heatmap of the expression levels of SsFRK gene family members under Et treatment. SR: S. robustum Mo...

Additional file 17: of Genome-wide identification of MST, SUT and SWEET family sugar transporters in root parasitic angiosperms and analysis of their expression during host parasitism

Vikram Misra (470450)
Eric Wafula (4476616)
Yu Wang (12152)
Claude dePamphilis (3246285)
Michael Timko (4612192)

May 2019

Every sugar transporter gene, their strongest stage of expression, clade and orthogroup. The clade, ...

Additional file 7: of Comparative genomics revealed the gene evolution and functional divergence of magnesium transporter families in Saccharum

Yongjun Wang (134570)
Xiuting Hua (3771160)
Jingsheng Xu (184529)
Zhichang Chen (6262175)
Tianqu Fan (6262178)
Zhaohui Zeng (6262181)
Hengbo Wang (6262184)
Ai-Ling Hour (114314)
Qingyi Yu (734375)
Ray Ming (591215)
Jisen Zhang (3445649)

January 2019

A schematic diagram for the relationship of the 5 clades of the phylogenetic tree constructed by NJ ...

Additional file 8: Table S24. of Association of variation in the sugarcane transcriptome with sugar content

Prathima Thirugnanasambandam (4041584)
Nam Hoang (4041575)
Agnelo Furtado (1823)
Frederick Botha (4616092)
Robert Henry (108785)

November 2017

Common and unique transcripts between LST vs LSB and HSB vs LSB (SoGI-DGE). Table S25 Common and uni...

Additional file 1: of Organization and evolution of the chalcone synthase gene family in bread wheat and relative species

Anastasia Glagoleva (6477974)
Nikita Ivanisenko (472058)
Elena Khlestkina (3488792)

March 2019

Intra-chromosomal localization of the Chs genes within the homoeologous group 2 chromosomes derived ...

Additional file 16: of Dissection of the molecular bases of genotype x environment interactions: a study of phenotypic plasticity of Saccharomyces cerevisiae in grape juices

Emilien Peltier (4781766)
Vikas Sharma (179393)
Maria MartĂ Raga (5947913)
Miguel Roncoroni (5947916)
Margaux Bernard (4781757)
Vladimir Jiranek (696240)
Yves Gibon (4074)
Philippe Marullo (462231)

November 2018

Primers information and reaction condition for microsatellite genotyping. (XLSX 12 kb

Additional file 9: of Genome-wide identification of MST, SUT and SWEET family sugar transporters in root parasitic angiosperms and analysis of their expression during host parasitism

Vikram Misra (470450)
Eric Wafula (4476616)
Yu Wang (12152)
Claude dePamphilis (3246285)
Michael Timko (4612192)

May 2019

Maximum likelihood tree of the SWEET genes, with heat map and domain architectures. Note the strong ...

Additional file 8: of New insights into the evolution and functional divergence of the SWEET family in Saccharum based on comparative genomics

Abstract

Extracted data

Additional file 8: of New insights into the evolution and functional divergence of the SWEET family in Saccharum based on comparative genomics

Abstract

Extracted data

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