Additional file 2: of Serum AGE/RAGEs as potential biomarker in idiopathic pulmonary fibrosis | ORKG Ask

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Additional file 3: of Comprehensive gene expression profiling identifies distinct and overlapping transcriptional profiles in non-specific interstitial pneumonia and idiopathic pulmonary fibrosis

Matthew Cecchini (5636582)
Karishma Hosein (5636585)
Christopher Howlett (5636588)
Mariamma Joseph (5636591)
Marco Mura (38993)

August 2018

Table S1. Top 25 upregulated genes in IPF vs. control (SAM analysis). Table S2. IPF vs. control, Ing...

Additional file 1: of Absence of early metabolic response assessed by 18F-FDG PET/CT after initiation of antifibrotic drugs in IPF patients

Benjamin Bondue (153816)
Amélie Castiaux (6211229)
Gaetan Van Simaeys (372225)
Céline Mathey (6211232)
Félicie Sherer (6211235)
Dominique Egrise (4429546)
Simon Lacroix (6211238)
François Huaux (209405)
Gilles Doumont (4429552)
Serge Goldman (372226)

January 2019

Figure S1. PET parameters were calculated (SUVmean, SUVmax, metabolic lung volume -MLV, total lung g...

Additional file 2: Figure S2. of Serum metabolic profiling identified a distinct metabolic signature in patients with idiopathic pulmonary fibrosis – a potential biomarker role for LysoPC

Barbara Rindlisbacher (4751145)
Cornelia Schmid (4751148)
Thomas Geiser (423897)
Cédric Bovet (3181863)
Manuela Funke-Chambour (4590088)

January 2018

MS (top, HDMSE experiment) and MS/MS spectra (bottom, HDMSE experiment) of the metabolic features el...

Additional file 3: of Serum AGE/RAGEs as potential biomarker in idiopathic pulmonary fibrosis

Carlos Machahua (5948075)
Ana Montes-Worboys (5948078)
Lurdes Planas-Cerezales (5948081)
Raquel Buendia-Flores (5948087)
Maria Molina-Molina (417753)
Vanesa Vicens-Zygmunt (5743109)

November 2018

AGEs-sRAGE correlation in IPF patients during follow-up. IPF patients with a decline of AGEs in seru...

Additional file 1: of Fibrocytes are increased in lung and peripheral blood of patients with idiopathic pulmonary fibrosis

P. Heukels (5205926)
J. van Hulst (5205956)
M. van Nimwegen (5205950)
C. Boorsma (5205947)
B. Melgert (5205935)
L. van den Toorn (5205920)
K. Boomars (5205929)
M. Wijsenbeek (5205953)
H. Hoogsteden (5205941)
J. von der Thüsen (5205965)
R. Hendriks (5205944)
M. Kool (5205938)
B. van den Blink (5205923)

May 2018

Characteristics of patients and the healthy subjects used for experiments. Data are mean ± standard ...

Additional file 4: Figure S2. of Disease progression in idiopathic pulmonary fibrosis with mild physiological impairment: analysis from the Australian IPF registry

Helen Jo (3427433)
Ian Glaspole (3427439)
Yuben Moodley (440778)
Sally Chapman (3050190)
Samantha Ellis (1833271)
Nicole Goh (4799013)
Peter Hopkins (107951)
Greg Keir (4799007)
Annabelle Mahar (4799004)
Wendy Cooper (16872)
Paul Reynolds (382180)
E. Haydn Walters (317568)
Christopher Zappala (4799016)
Christopher Grainge (582263)
Heather Allan (4799019)
Sacha Macansh (4799010)
Tamera Corte (3427430)

January 2018

Locally Weighted Scatterplot Smoothing curves for FVC% predicted. a. Mild physiological impairment (...

Additional file 5: of Fibrocytes are increased in lung and peripheral blood of patients with idiopathic pulmonary fibrosis

P. Heukels (5205926)
J. van Hulst (5205956)
M. van Nimwegen (5205950)
C. Boorsma (5205947)
B. Melgert (5205935)
L. van den Toorn (5205920)
K. Boomars (5205929)
M. Wijsenbeek (5205953)
H. Hoogsteden (5205941)
J. von der ThĂźsen (5205932)
R. Hendriks (5205944)
M. Kool (5205938)
B. van den Blink (5205923)

May 2018

Circulating fibrocyte numbers in patients with IPF and idiopathic pulmonary hypertension (IPAH). (A)...

Additional file 1: Figure S1. of Serum metabolic profiling identified a distinct metabolic signature in patients with idiopathic pulmonary fibrosis â a potential biomarker role for LysoPC

Barbara Rindlisbacher (4751145)
Cornelia Schmid (4751148)
Thomas Geiser (423897)
CĂŠdric Bovet (4751229)
Manuela Funke-Chambour (4590088)

January 2018

Heat maps representing the log10-transformed abundance profile (Pareto scaled) of the regulated meta...

Additional file 1: of Inflammatory pathways are upregulated in the nasal epithelium in patients with idiopathic pulmonary fibrosis

Marc Sala (6011141)
Yalbi Balderas-MartĂnez (6011192)
Ivette BuendĂa-Roldan (6011195)
Hiam Abdala-Valencia (315950)
Kiwon Nam (6011147)
Manu Jain (263718)
Sangeeta Bhorade (6011150)
Ankit Bharat (6011153)
Paul Reyfman (6011156)
Karen Ridge (6011159)
Annie Pardo (29364)
Jacob Sznajder (6011162)
G. Budinger (3570446)
Alexander Misharin (2021413)
Moises Selman (3449249)

November 2018

Figure S1. (A) Box plot of the RNA integrity number equivalent (RINe) showing distribution of IPF ve...

Additional file 2: of The clinical course of idiopathic pulmonary fibrosis and its association to quality of life over time: longitudinal data from the INSIGHTS-IPF registry

Michael Kreuter (760776)
Jeff Swigris (4249993)
David Pittrow (78726)
Silke Geier (4249981)
Jens Klotsche (93841)
Antje Prasse (354621)
Hubert Wirtz (202686)
Dirk Koschel (4250002)
Stefan Andreas (4249996)
Martin Claussen (832613)
Christian GrohĂŠ (5541962)
Henrike Wilkens (4249999)
Lars Hagmeyer (4250005)
Dirk Skowasch (320033)
Joachim Meyer (4249990)
Joachim Kirschner (4249987)
Sven GlĂ¤ser (3497915)
Nicolas Kahn (6472319)
Tobias Welte (87188)
Claus Neurohr (832616)
Martin Schwaiblmair (4249984)
Matthias Held (631393)
Thomas Bahmer (4249978)
Tim Oqueka (3964598)
Marion Frankenberger (173459)
JĂźrgen Behr (3507065)

March 2019

Table S1. Quality of life scores at each follow-up visit and change in quality of life over the 3-ye...

Additional file 1 of Establishment and application of the BRP prognosis model for idiopathic pulmonary fibrosis

Xiaoyun Cheng (441892)
Zhichao Feng (6583157)
Boyu Pan (9967361)
Qingxiang Liu (1912918)
Yuanyuan Han (1770817)
Lijun Zou (4110082)
Pengfei Rong (1322214)
Jie Meng (17377019)

November 2023

Additional file 1: Figure S1. The forest plot of the Cox univariate and multivariate analyses for TF...

Additional file 1: of Impaired diversity of the lung microbiome predicts progression of idiopathic pulmonary fibrosis

Youhei Takahashi (4897174)
Atsushi Saito (278077)
Hirofumi Chiba (4897168)
Koji Kuronuma (3613940)
Kimiyuki Ikeda (4897162)
Tomofumi Kobayashi (4897171)
Shigeru Ariki (360792)
Motoko Takahashi (4897165)
Yasushi Sasaki (52790)
Hiroki Takahashi (21598)

February 2018

Impaired Diversity of the Lung Microbione Predicts Progression of Idiopathic pulmonary Fibrosis. Tab...

Additional file 3: of The clinical course of idiopathic pulmonary fibrosis and its association to quality of life over time: longitudinal data from the INSIGHTS-IPF registry

Michael Kreuter (760776)
Jeff Swigris (4249993)
David Pittrow (78726)
Silke Geier (4249981)
Jens Klotsche (93841)
Antje Prasse (354621)
Hubert Wirtz (202686)
Dirk Koschel (4250002)
Stefan Andreas (4249996)
Martin Claussen (832613)
Christian GrohĂŠ (5541962)
Henrike Wilkens (4249999)
Lars Hagmeyer (4250005)
Dirk Skowasch (320033)
Joachim Meyer (4249990)
Joachim Kirschner (4249987)
Sven GlĂ¤ser (3497915)
Nicolas Kahn (6472319)
Tobias Welte (87188)
Claus Neurohr (832616)
Martin Schwaiblmair (4249984)
Matthias Held (631393)
Thomas Bahmer (4249978)
Tim Oqueka (3964598)
Marion Frankenberger (173459)
JĂźrgen Behr (3507065)

March 2019

Figure S1. Mean difference in QoL scores for patients with one, two, three and more than three hospi...

Additional file 3: of Comprehensive gene expression profiling identifies distinct and overlapping transcriptional profiles in non-specific interstitial pneumonia and idiopathic pulmonary fibrosis

Matthew Cecchini (5636582)
Karishma Hosein (5636585)
Christopher Howlett (5636588)
Mariamma Joseph (5636591)
Marco Mura (38993)

August 2018

Table S1. Top 25 upregulated genes in IPF vs. control (SAM analysis). Table S2. IPF vs. control, Ing...

Additional file 1: of Absence of early metabolic response assessed by 18F-FDG PET/CT after initiation of antifibrotic drugs in IPF patients

Benjamin Bondue (153816)
Amélie Castiaux (6211229)
Gaetan Van Simaeys (372225)
Céline Mathey (6211232)
Félicie Sherer (6211235)
Dominique Egrise (4429546)
Simon Lacroix (6211238)
François Huaux (209405)
Gilles Doumont (4429552)
Serge Goldman (372226)

January 2019

Figure S1. PET parameters were calculated (SUVmean, SUVmax, metabolic lung volume -MLV, total lung g...

Additional file 2: Figure S2. of Serum metabolic profiling identified a distinct metabolic signature in patients with idiopathic pulmonary fibrosis – a potential biomarker role for LysoPC

Barbara Rindlisbacher (4751145)
Cornelia Schmid (4751148)
Thomas Geiser (423897)
Cédric Bovet (3181863)
Manuela Funke-Chambour (4590088)

January 2018

MS (top, HDMSE experiment) and MS/MS spectra (bottom, HDMSE experiment) of the metabolic features el...

Additional file 1: of Fibrocytes are increased in lung and peripheral blood of patients with idiopathic pulmonary fibrosis

P. Heukels (5205926)
J. van Hulst (5205956)
M. van Nimwegen (5205950)
C. Boorsma (5205947)
B. Melgert (5205935)
L. van den Toorn (5205920)
K. Boomars (5205929)
M. Wijsenbeek (5205953)
H. Hoogsteden (5205941)
J. von der Thüsen (5205965)
R. Hendriks (5205944)
M. Kool (5205938)
B. van den Blink (5205923)

May 2018

Characteristics of patients and the healthy subjects used for experiments. Data are mean ± standard ...

Additional file 4: Figure S2. of Disease progression in idiopathic pulmonary fibrosis with mild physiological impairment: analysis from the Australian IPF registry

Helen Jo (3427433)
Ian Glaspole (3427439)
Yuben Moodley (440778)
Sally Chapman (3050190)
Samantha Ellis (1833271)
Nicole Goh (4799013)
Peter Hopkins (107951)
Greg Keir (4799007)
Annabelle Mahar (4799004)
Wendy Cooper (16872)
Paul Reynolds (382180)
E. Haydn Walters (317568)
Christopher Zappala (4799016)
Christopher Grainge (582263)
Heather Allan (4799019)
Sacha Macansh (4799010)
Tamera Corte (3427430)

January 2018

Locally Weighted Scatterplot Smoothing curves for FVC% predicted. a. Mild physiological impairment (...

Additional file 5: of Fibrocytes are increased in lung and peripheral blood of patients with idiopathic pulmonary fibrosis

P. Heukels (5205926)
J. van Hulst (5205956)
M. van Nimwegen (5205950)
C. Boorsma (5205947)
B. Melgert (5205935)
L. van den Toorn (5205920)
K. Boomars (5205929)
M. Wijsenbeek (5205953)
H. Hoogsteden (5205941)
J. von der ThĂźsen (5205932)
R. Hendriks (5205944)
M. Kool (5205938)
B. van den Blink (5205923)

May 2018

Circulating fibrocyte numbers in patients with IPF and idiopathic pulmonary hypertension (IPAH). (A)...

Additional file 1: Figure S1. of Serum metabolic profiling identified a distinct metabolic signature in patients with idiopathic pulmonary fibrosis â a potential biomarker role for LysoPC

Barbara Rindlisbacher (4751145)
Cornelia Schmid (4751148)
Thomas Geiser (423897)
CĂŠdric Bovet (4751229)
Manuela Funke-Chambour (4590088)

January 2018

Heat maps representing the log10-transformed abundance profile (Pareto scaled) of the regulated meta...

Additional file 1: of Inflammatory pathways are upregulated in the nasal epithelium in patients with idiopathic pulmonary fibrosis

Marc Sala (6011141)
Yalbi Balderas-MartĂnez (6011192)
Ivette BuendĂa-Roldan (6011195)
Hiam Abdala-Valencia (315950)
Kiwon Nam (6011147)
Manu Jain (263718)
Sangeeta Bhorade (6011150)
Ankit Bharat (6011153)
Paul Reyfman (6011156)
Karen Ridge (6011159)
Annie Pardo (29364)
Jacob Sznajder (6011162)
G. Budinger (3570446)
Alexander Misharin (2021413)
Moises Selman (3449249)

November 2018

Figure S1. (A) Box plot of the RNA integrity number equivalent (RINe) showing distribution of IPF ve...

Additional file 2: of The clinical course of idiopathic pulmonary fibrosis and its association to quality of life over time: longitudinal data from the INSIGHTS-IPF registry

Michael Kreuter (760776)
Jeff Swigris (4249993)
David Pittrow (78726)
Silke Geier (4249981)
Jens Klotsche (93841)
Antje Prasse (354621)
Hubert Wirtz (202686)
Dirk Koschel (4250002)
Stefan Andreas (4249996)
Martin Claussen (832613)
Christian GrohĂŠ (5541962)
Henrike Wilkens (4249999)
Lars Hagmeyer (4250005)
Dirk Skowasch (320033)
Joachim Meyer (4249990)
Joachim Kirschner (4249987)
Sven GlĂ¤ser (3497915)
Nicolas Kahn (6472319)
Tobias Welte (87188)
Claus Neurohr (832616)
Martin Schwaiblmair (4249984)
Matthias Held (631393)
Thomas Bahmer (4249978)
Tim Oqueka (3964598)
Marion Frankenberger (173459)
JĂźrgen Behr (3507065)

March 2019

Table S1. Quality of life scores at each follow-up visit and change in quality of life over the 3-ye...

Additional file 1 of Establishment and application of the BRP prognosis model for idiopathic pulmonary fibrosis

Xiaoyun Cheng (441892)
Zhichao Feng (6583157)
Boyu Pan (9967361)
Qingxiang Liu (1912918)
Yuanyuan Han (1770817)
Lijun Zou (4110082)
Pengfei Rong (1322214)
Jie Meng (17377019)

November 2023

Additional file 1: Figure S1. The forest plot of the Cox univariate and multivariate analyses for TF...

Additional file 1: of Impaired diversity of the lung microbiome predicts progression of idiopathic pulmonary fibrosis

Youhei Takahashi (4897174)
Atsushi Saito (278077)
Hirofumi Chiba (4897168)
Koji Kuronuma (3613940)
Kimiyuki Ikeda (4897162)
Tomofumi Kobayashi (4897171)
Shigeru Ariki (360792)
Motoko Takahashi (4897165)
Yasushi Sasaki (52790)
Hiroki Takahashi (21598)

February 2018

Impaired Diversity of the Lung Microbione Predicts Progression of Idiopathic pulmonary Fibrosis. Tab...

Additional file 3: of The clinical course of idiopathic pulmonary fibrosis and its association to quality of life over time: longitudinal data from the INSIGHTS-IPF registry

Michael Kreuter (760776)
Jeff Swigris (4249993)
David Pittrow (78726)
Silke Geier (4249981)
Jens Klotsche (93841)
Antje Prasse (354621)
Hubert Wirtz (202686)
Dirk Koschel (4250002)
Stefan Andreas (4249996)
Martin Claussen (832613)
Christian GrohĂŠ (5541962)
Henrike Wilkens (4249999)
Lars Hagmeyer (4250005)
Dirk Skowasch (320033)
Joachim Meyer (4249990)
Joachim Kirschner (4249987)
Sven GlĂ¤ser (3497915)
Nicolas Kahn (6472319)
Tobias Welte (87188)
Claus Neurohr (832616)
Martin Schwaiblmair (4249984)
Matthias Held (631393)
Thomas Bahmer (4249978)
Tim Oqueka (3964598)
Marion Frankenberger (173459)
JĂźrgen Behr (3507065)

March 2019

Figure S1. Mean difference in QoL scores for patients with one, two, three and more than three hospi...

Additional file 3: of Comprehensive gene expression profiling identifies distinct and overlapping transcriptional profiles in non-specific interstitial pneumonia and idiopathic pulmonary fibrosis

Matthew Cecchini (5636582)
Karishma Hosein (5636585)
Christopher Howlett (5636588)
Mariamma Joseph (5636591)
Marco Mura (38993)

August 2018

Table S1. Top 25 upregulated genes in IPF vs. control (SAM analysis). Table S2. IPF vs. control, Ing...

Additional file 1: of Absence of early metabolic response assessed by 18F-FDG PET/CT after initiation of antifibrotic drugs in IPF patients

Benjamin Bondue (153816)
Amélie Castiaux (6211229)
Gaetan Van Simaeys (372225)
Céline Mathey (6211232)
Félicie Sherer (6211235)
Dominique Egrise (4429546)
Simon Lacroix (6211238)
François Huaux (209405)
Gilles Doumont (4429552)
Serge Goldman (372226)

January 2019

Figure S1. PET parameters were calculated (SUVmean, SUVmax, metabolic lung volume -MLV, total lung g...

Additional file 2: Figure S2. of Serum metabolic profiling identified a distinct metabolic signature in patients with idiopathic pulmonary fibrosis – a potential biomarker role for LysoPC

Barbara Rindlisbacher (4751145)
Cornelia Schmid (4751148)
Thomas Geiser (423897)
Cédric Bovet (3181863)
Manuela Funke-Chambour (4590088)

January 2018

MS (top, HDMSE experiment) and MS/MS spectra (bottom, HDMSE experiment) of the metabolic features el...