Principal component loading of each genus and family for microbiome first principal component (PC1). (XLSX 11.9 kb
Table S3. Number of species, ranged by phyla, along the digestive tract identified by culturomics, m...
Complete taxonomy table. Rarified (18,000 sequences) taxonomy table used in this study. (XLSX 219Â k...
Figure S2. Phyla identified along the gastrointestinal tract by culturomics (number of identified sp...
Principal component loading of each metabolite for metabolome first principal component (PC1). (XLSX...
Correlation coefficients between selected bacterial families and metabolome. (PDF 27 kb
Relative abundance of intestinal microbiome (species level classification of OTUs). (XLSX 2182 kb
Correlation between score of PC2 of the metabolome and that of the microbiome. (DOCX 278 kb
Comparison of relative peak area of metabolite picked up by the PCLâ>â0.7. (DOCX 229 kb
Heat maps based on the correlation between the relative abundance of the microbiome at different tax...
Comparison of relative peak area of metabolite picked up by the PCL < − 0.7. (DOCX 119 kb
Results of similarity calculation for OTU-based family and genus-level classification. (DOCX 15.1 kb
Similarities in the OTUs that are classified as different families within the same order. (DOCX 20 k...
Similarities in the OTUs that are classified as different genera within the same family. (DOCX 20 kb
Example of similarity calculation (results of calculation in the yellow area of Additional file 12)....
Abstract Background 16S rRNA gene amplicon sequencing analysis (16S amplicon sequencing) has provide...
Table S3. Number of species, ranged by phyla, along the digestive tract identified by culturomics, m...
Complete taxonomy table. Rarified (18,000 sequences) taxonomy table used in this study. (XLSX 219Â k...
Figure S2. Phyla identified along the gastrointestinal tract by culturomics (number of identified sp...
Principal component loading of each metabolite for metabolome first principal component (PC1). (XLSX...
Correlation coefficients between selected bacterial families and metabolome. (PDF 27 kb
Relative abundance of intestinal microbiome (species level classification of OTUs). (XLSX 2182 kb
Correlation between score of PC2 of the metabolome and that of the microbiome. (DOCX 278 kb
Comparison of relative peak area of metabolite picked up by the PCLâ>â0.7. (DOCX 229 kb
Heat maps based on the correlation between the relative abundance of the microbiome at different tax...
Comparison of relative peak area of metabolite picked up by the PCL < − 0.7. (DOCX 119 kb
Results of similarity calculation for OTU-based family and genus-level classification. (DOCX 15.1 kb
Similarities in the OTUs that are classified as different families within the same order. (DOCX 20 k...
Similarities in the OTUs that are classified as different genera within the same family. (DOCX 20 kb
Example of similarity calculation (results of calculation in the yellow area of Additional file 12)....
Abstract Background 16S rRNA gene amplicon sequencing analysis (16S amplicon sequencing) has provide...
Table S3. Number of species, ranged by phyla, along the digestive tract identified by culturomics, m...
Complete taxonomy table. Rarified (18,000 sequences) taxonomy table used in this study. (XLSX 219Â k...
Figure S2. Phyla identified along the gastrointestinal tract by culturomics (number of identified sp...
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