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ADAPTmap_genotypeTOP_20160222_full

Licia Colli (159403)
Marco Milanesi (3154470)
Andrea Talenti (4171039)
Francesca Bertolini (731812)
Minhui Chen (332801)
Alessandra Crisà (2247037)
Kevin Daly (5986172)
Marcello Del Corvo (4831620)
Bernt Guldbrandtsen (340532)
Johannes A. Lenstra (184968)
Ben D. Rosen (5989115)
Elia Vajana (3267480)
Gennaro Catillo (3863749)
Stéphane Joost (5989118)
Ezequiel Luis Nicolazzi (5026724)
Estelle Rochat (5250493)
Max F. Rothschild (68804)
Bertrand Servin (77573)
Tad S. Sonstegard (175161)
Roberto Steri (3563927)
Curtis P. Van Tassel (5989121)
Paolo Ajmone-Marsan (159432)
Paola Crepaldi (517054)
Alessandra Stella (28791)
AdaptMap Consortium (5989124)

Publication date

November 2018

DOI

10.5061/dryad.v8g21pt/1

Abstract

Genotyping data in plink binary format (bed/bim/fam) for 4,653 goats and 53,347 genotypes

Extracted data

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Illumina CanineHD SNP data from 24 dingoes. In PLINK binary format (.bed, .bim and .fam)

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ADAPTmap_genotypeTOP_20160222_full

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Genotyping data in plink binary format (bed/bim/fam) for 4,653 goats and 53,347 genotypes

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Genotyping data in ped and map format (ped/map) for 72 goats and 53,347 genotypes

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Genotypes, for 19 microsatellites, of 520 goat sampled in 23 different locations of Burkina Faso. Ge...

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Genotype data in PLINK binary format associated with the following paper: Cortellari et al., 2021. '...

Genotypes in PLINK binary format (*.bed; 1 of 3)

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Genotypes for reference samples in PLINK binary format. The PLINK format entails three separate fil...

Genotype file for Canine HD array from 24 dingoes (bed)

Cairns, Kylie M.
Shannon, Laura M.
Koler-Matznick, Janice
Ballard, J. William O.
Boyko, Adam R.

June 2018

Illumina CanineHD SNP data from 24 dingoes. In PLINK binary format (.bed, .bim and .fam)

Algerian sheep genotypes (.ped file)

Samir B.S. Gaouar (3197655)
Mohamed Lafri (721636)
Amel Djaout (3197643)
Rachid El-Bouyahiaoui (3197649)
Amina Bouri (3197652)
Amel Bouchatal (3197646)
Abderrahman Maftah (78260)
Elena Ciani (185004)
Anne Da Silva (721632)

October 2016

Genotypes obtained with the Illumina OvineSNP50K Genotyping BeadChip (genotype files) for eight Alg...

Genotypes, SNP, sample, and population information for 1,615 cattle from 137 breeds

Jared Decker (3271764)
Jeremy F. Taylor (179789)
Leeson Alexander (3271758)
Juha Kantanen (197090)
Ann Millbrooke (3271707)
Robert Schnabel (236298)
Michael MacNeil (3271761)

October 2016

This file contains the genotypes from 43,018 SNP markers scored in 1,615 cattle. Samples were genoty...

ADAPTmap_genotypeTOP_20160222_full

Colli, Licia
Milanesi, Marco
Talenti, Andrea
Bertolini, Francesca
Chen, Minhui
Crisà, Alessandra
Daly, Kevin
Del Corvo, Marcello
Guldbrandtsen, Bernt
Lenstra, Johannes A.
Rosen, Ben D.
Vajana, Elia
Catillo, Gennaro
Joost, Stéphane
Nicolazzi, Ezequiel Luis
Rochat, Estelle
Rothschild, Max F.
Servin, Bertrand
Sonstegard, Tad S.
Steri, Roberto
Van Tassel, Curtis P.
Ajmone-Marsan, Paolo
Crepaldi, Paola
Stella, Alessandra
AdaptMap Consortium

November 2018

Genotyping data in plink binary format (bed/bim/fam) for 4,653 goats and 53,347 genotypes

goat_data2_dryad

Burren, Alexander
Neuditschko, Markus
Signer-Hasler, Heidi
Frischknecht, Mirjam
Reber, Irene
Menzi, Fiona
Drögemüller, Cord
Flury, Christine

July 2016

Genotypes of 473 Swiss goats and 48'019 SNPs in plink transposed file Format (.tped)

Visser, Carina
Lashmar, Simon F.
Van Marle Koster, Este
Poli, Mario A.
Allain, Daniel

May 2016

Genotyping data of 104 angora goats (30 from Argentina, 26 from France and 48 from South Africa) gen...

Plink file data for Barki Ruminants (sheep and goats)

Kim, Eui-Soo
Elbeltagy, Ahmed R.
Aboul-Naga, Adel M.
Rischkowsky, Barbara
Sayre, Bryan
Mwacharo, Joram M.
Rothschild, M. F.

September 2015

The data contains SNP genotype data for Barki sheep and goats that can be used in Plink

PLINK formatted genotype data for 53 Nepali Tibetans

Jeong, Choognwon
Peter, Benjamin M.
Basnyat, Buddha
Neupane, Maniraj
Beall, Cynthia M.
Childs, Geoff
Craig, Sienna R.
Novembre, John
Di Rienzo, Anna

May 2017

Compressed tarball archive containing PLINK formatted files (bim, bed, fam) with genotype data for 5...

October 2017

The TalentiEtAl_2017.ped file contains the unphased genotype data for all the 929 animals described ...

Algerian sheep genotypes (.map file)

Samir B.S. Gaouar (3197655)
Mohamed Lafri (721636)
Amel Djaout (3197643)
Rachid El-Bouyahiaoui (3197649)
Amina Bouri (3197652)
Amel Bouchatal (3197646)
Abderrahman Maftah (78260)
Elena Ciani (185004)
Anne Da Silva (721632)

October 2016

Genotypes obtained with the Illumina OvineSNP50K Genotyping BeadChip (markers files by chromosomes)...

Analysis of genome-wide DNA arrays reveals the genomic population structure and diversity in autochthonous Greek goat breeds

Michailidou Sofia
Tsangaris George
Tzora Athena
Skoufos Ioannis
Banos George
Argiriou Anagnostis
Arsenos George

June 2019

Genotyping data in ped and map format (ped/map) for 72 goats and 53,347 genotypes

Northern European cattle_genomic profiles.zip

Astrid Stronen (3312192)
Cino Pertoldi (469969)
Laura Iacolina (3249051)
Haja Kadarmideen (3583106)
Torsten Kristensen (3248397)

February 2019

The data include PLINK files in binary format (bed, bim, fam) for 195 individual cattle and 677,311 ...

Data Traoré et al. (2012) BMC Genetics

Traoré, Amadou
Álvarez, Isabel
Fernández, Iván
Pérez-Pardal, Lucía
Kaboré, Adama
Ouédraogo-Sanou, Gisèlle M. S.
Zaré, Yacouba
Tambourá, Hamidou H.
Goyache, Félix

August 2012

Genotypes, for 19 microsatellites, of 520 goat sampled in 23 different locations of Burkina Faso. Ge...

The climatic and genetic heritage of Italian goat breeds with genomic SNP data

Barbato, M

Genotype data in PLINK binary format associated with the following paper: Cortellari et al., 2021. '...

Genotypes in PLINK binary format (*.bed; 1 of 3)

Morgan, Andrew P.
Fu, Chen-Ping
Kao, Chia-Yu
Welsh, Catherine E.
Didion, John P.
Yadgary, Liran
Hyacinth, Leeanna
Ferris, Martin T.
Bell, Timothy A.
Miller, Darla R.
Giusti-Rodriguez, Paola
Nonneman, Randal J.
Cook, Kevin D.
Whitmire, Jason K.
Gralinski, Lisa E.
Keller, Mark
Attie, Alan D.
Churchill, Gary A.
Petkov, Petko
Sullivan, Patrick F.
Brennan, Jennifer R.
McMillan, Leonard
Pardo-Manuel de Villena, Fernando

September 2016

Genotypes for reference samples in PLINK binary format. The PLINK format entails three separate fil...

Genotype file for Canine HD array from 24 dingoes (bed)

Cairns, Kylie M.
Shannon, Laura M.
Koler-Matznick, Janice
Ballard, J. William O.
Boyko, Adam R.

June 2018

Illumina CanineHD SNP data from 24 dingoes. In PLINK binary format (.bed, .bim and .fam)

Algerian sheep genotypes (.ped file)

Samir B.S. Gaouar (3197655)
Mohamed Lafri (721636)
Amel Djaout (3197643)
Rachid El-Bouyahiaoui (3197649)
Amina Bouri (3197652)
Amel Bouchatal (3197646)
Abderrahman Maftah (78260)
Elena Ciani (185004)
Anne Da Silva (721632)

October 2016

Genotypes obtained with the Illumina OvineSNP50K Genotyping BeadChip (genotype files) for eight Alg...

Genotypes, SNP, sample, and population information for 1,615 cattle from 137 breeds

Jared Decker (3271764)
Jeremy F. Taylor (179789)
Leeson Alexander (3271758)
Juha Kantanen (197090)
Ann Millbrooke (3271707)
Robert Schnabel (236298)
Michael MacNeil (3271761)

October 2016

This file contains the genotypes from 43,018 SNP markers scored in 1,615 cattle. Samples were genoty...