MiSeq raw sequences of the Cytb minibarcode from 400 faecal samples of cats (Felis silvestris catus) from Eastern France

This ZIP file contains 1694 FASTQ files of the 4.042.606 paired-end reads (R1: reads 1; R2: reads 2) produced for each faecal samples in replicates using the MiSeq platform. The 847 multiplexed PCR products were indexed using both forward and reverse indices. The list of the 415 multiplexed samples and the 13 negative controls are provided in the following CSV file titled: Information concerning the samples multiplexed in the MiSeq run