This TXT file contains the number of reads for each distinct taxonomic affiliation obtains with the SESAME barcode software using the variant sequences of the Ion PGM and MiSeq runs, and for each sample replicate before data filtering. The thresholds TFA described in the article are provided in the columns C to H. Each sample is described by 12 columns: 6 concern the Ion PGM results (suffix “_I”) and 6 concern the MiSeq results (suffix “_M”). For each sequencing platform, the taxonomic affiliation results of the two PCR replicates are provided for three similarity thresholds: 95%, 98% and 100%. The column “type” indicates the putative origin of the food using the taxonomic identification: prey (Pr) or human-related food (Hf)
The table presents the number of sequences per OTU and per sample (fish gut). Sequence clustering wa...
This XLSX file contains the number of reads for each distinct variant of the MiSeq run and for each ...
<p># Table_S1.pdf<br>Composition of an artificial ‘local’ dataset of broad ecological range (BER). A...
This TXT file contains the number of occurrences for each distinct taxonomic affiliation obtains aft...
A goal of many environmental DNA barcoding studies is to infer quantitative information about relati...
<p>Circles represent individual taxa, and the relationship between the log<sub>10</sub> of their abu...
Tabulation of the relative abundance of microbiome (at a taxonomic level of species) within subjects...
DNA metabarcoding of faecal samples is being successfully used to study the foraging niche of specie...
Tremendous advances in genetic and sequencing technology are enabling unprecedented insight into hum...
International audienceDNA metabarcoding of faecal samples is being successfully used to study the fo...
Data used to test q2-clawback using taxonomic weights derived from shotgun sequencing experiments. ...
<p>Each sequence set for each animal was rarefied to 200 sequences per sample 10 times, and the numb...
Advances in DNA sequencing technology have revolutionised the field of molecular analysis of trophic...
The table presents the number of sequences per OTU and per sample (fish gut). Sequence clustering wa...
This XLSX file contains the number of reads for each distinct variant of the MiSeq run and for each ...
<p># Table_S1.pdf<br>Composition of an artificial ‘local’ dataset of broad ecological range (BER). A...
This TXT file contains the number of occurrences for each distinct taxonomic affiliation obtains aft...
A goal of many environmental DNA barcoding studies is to infer quantitative information about relati...
<p>Circles represent individual taxa, and the relationship between the log<sub>10</sub> of their abu...
Tabulation of the relative abundance of microbiome (at a taxonomic level of species) within subjects...
DNA metabarcoding of faecal samples is being successfully used to study the foraging niche of specie...
Tremendous advances in genetic and sequencing technology are enabling unprecedented insight into hum...
International audienceDNA metabarcoding of faecal samples is being successfully used to study the fo...
Data used to test q2-clawback using taxonomic weights derived from shotgun sequencing experiments. ...
<p>Each sequence set for each animal was rarefied to 200 sequences per sample 10 times, and the numb...
Advances in DNA sequencing technology have revolutionised the field of molecular analysis of trophic...
The table presents the number of sequences per OTU and per sample (fish gut). Sequence clustering wa...
This XLSX file contains the number of reads for each distinct variant of the MiSeq run and for each ...
<p># Table_S1.pdf<br>Composition of an artificial ‘local’ dataset of broad ecological range (BER). A...