Figure S1. Translatome analysis of E. limosum ATCC 8486. (a) Comparison between RNA-Seq and Ribo-Seq under heterotrophic condition. Scatter plot between ribosome-protected fragment profile (RPF) as the y-axis and mRNA expression (mRNA) as the x-axis. (b) Comparison between RNA-Seq and Ribo-Seq under autotrophic conditions. The results show positive correlation with R2 of 0.55 and 0.67, respectively. (TIF 1104 kb
Abstract Background Acetogenic bacteria constitute promising biocatalysts for the conversion of CO2/...
Part 1. Frequency plots for the distance between two adjacent structural genes in Escherichia coli K...
Saturation curves of the Illumina RNA-Seq data. The X-axis represents the number of reads. The Y-axi...
Table S8. Ribosome profiling analysis of genes in Eubacterium limosum under heterotrophic and autotr...
Figure S2. Analysis of translational regulation with determined 5′UTRs. (a) The relative mRNA expres...
Table S1. Transcription expression of genes in Eubacterium limosum under heterotrophic and autotroph...
Table S2. Significantly regulated genes of Eubacterium limosum in response to the autotrophic growth...
Table S3. COG functional assignments of differently expressed genes (DEGs) in Eubacterium limosum be...
Table S9. KEGG pathways sorted by translation efficiency UP and DOWN regulated genes in Eubacterium ...
Table S6. Transcription profile of genes associated with energy conservation (DOCX 17 kb
Table S4. KEGG pathways sorted by transcriptionally UP and DOWN regulated genes in Eubacterium limos...
Table S10. Protein subunits of known protein complexes used in stoichiometry analysis (XLSX 14 kb
Table S7. Transcription profile of genes associated with central carbon metabolism (DOCX 20 kb
Table S5. Transcription profile of genes associated with the Wood-Ljungdahl pathway (DOCX 17 kb
Additional file 1: Supplementary table S1. Correlation coefficient between various replicates of the...
Abstract Background Acetogenic bacteria constitute promising biocatalysts for the conversion of CO2/...
Part 1. Frequency plots for the distance between two adjacent structural genes in Escherichia coli K...
Saturation curves of the Illumina RNA-Seq data. The X-axis represents the number of reads. The Y-axi...
Table S8. Ribosome profiling analysis of genes in Eubacterium limosum under heterotrophic and autotr...
Figure S2. Analysis of translational regulation with determined 5′UTRs. (a) The relative mRNA expres...
Table S1. Transcription expression of genes in Eubacterium limosum under heterotrophic and autotroph...
Table S2. Significantly regulated genes of Eubacterium limosum in response to the autotrophic growth...
Table S3. COG functional assignments of differently expressed genes (DEGs) in Eubacterium limosum be...
Table S9. KEGG pathways sorted by translation efficiency UP and DOWN regulated genes in Eubacterium ...
Table S6. Transcription profile of genes associated with energy conservation (DOCX 17 kb
Table S4. KEGG pathways sorted by transcriptionally UP and DOWN regulated genes in Eubacterium limos...
Table S10. Protein subunits of known protein complexes used in stoichiometry analysis (XLSX 14 kb
Table S7. Transcription profile of genes associated with central carbon metabolism (DOCX 20 kb
Table S5. Transcription profile of genes associated with the Wood-Ljungdahl pathway (DOCX 17 kb
Additional file 1: Supplementary table S1. Correlation coefficient between various replicates of the...
Abstract Background Acetogenic bacteria constitute promising biocatalysts for the conversion of CO2/...
Part 1. Frequency plots for the distance between two adjacent structural genes in Escherichia coli K...
Saturation curves of the Illumina RNA-Seq data. The X-axis represents the number of reads. The Y-axi...