Additional file 5 of Detecting neural assemblies in calcium imaging data

Runtime (walltime) as a function of the size of the neural array and the simulation duration. In every graph and for every algorithm the mean is depicted by a solid line together with the region of one standard deviation above and below. The measurements were conducted on a high performance computing cluster, where for the analysis of every dataset 1 CPU core and 16 GB of RAM were allocated and output was written to the flash storage. The relative runtime for every algorithm was computed relative to the runtime at the default parameters (cf. Table. 1). A, B: Varying the size of the neural array. C, D: Varying the simulation duration T. (PDF 189 kb