Boxplots comparing the correlations of predicted B-factors by our Seq-GNM for (a) RaptorX and (b) EVcouplings with that of the structural GNM for all 139 structures using a constant threshold for EC contacts. The GNM analysis is conducted 8 times using a constant threshold (between 0.92 and 0.99) each time. The best average correlations are produced when the constant threshold value of 0.98 is used.</p
Correlation analysis of WNGF results with the backbone and threshold network on the regional trade n...
Correlations between estimated thresholds and true thresholds for MSD (blue squares) and the Andrich...
<p>All modules with size larger than 2 and B-score are included. A few modules whose B-score is 0 (...
The distribution of correlation coefficients between B-factors from Seq-GNM and GNM from structure. ...
<p>Box plots represent the average correlations from a non-redundant dataset containing 113 proteins...
A plot of theoretical B-factors as calculated by Seq-GNM (blue), the original GNM obtained from stru...
<p>Correlation between MSF and X-ray crystallographic B-factor for the 26 structures in the data set...
The disease prediction data showing the accuracy, sensitivity, and the selectivity of Seq-GNM compar...
<p>An illustration of the correlation analysis procedure for morphology changing (top row) and arrhy...
B-factors are shown on the respective structures for (a) 5'(3')-deoxyribonucleotidase (2JAO) and (b)...
<p>Pearson’s Correlation and Partial Correlation Analyses (Controlling for TOC or TN) between GNM Ra...
<p><b>A.-B.</b> Example cells from the test set for dataset 1 (OGB-1) and dataset 3 (GCaMP6s) show h...
<p>Correlation of structure frequencies of GC (two-letter) and GCAU (four-letter) sequences of lengt...
<p>Pearson correlations between BGS and BVF values in the outer region (left panel) and between BBS ...
<p>Pearson correlations between BGS and BVF values (left panel) and between BBS and BVF values (righ...
Correlation analysis of WNGF results with the backbone and threshold network on the regional trade n...
Correlations between estimated thresholds and true thresholds for MSD (blue squares) and the Andrich...
<p>All modules with size larger than 2 and B-score are included. A few modules whose B-score is 0 (...
The distribution of correlation coefficients between B-factors from Seq-GNM and GNM from structure. ...
<p>Box plots represent the average correlations from a non-redundant dataset containing 113 proteins...
A plot of theoretical B-factors as calculated by Seq-GNM (blue), the original GNM obtained from stru...
<p>Correlation between MSF and X-ray crystallographic B-factor for the 26 structures in the data set...
The disease prediction data showing the accuracy, sensitivity, and the selectivity of Seq-GNM compar...
<p>An illustration of the correlation analysis procedure for morphology changing (top row) and arrhy...
B-factors are shown on the respective structures for (a) 5'(3')-deoxyribonucleotidase (2JAO) and (b)...
<p>Pearson’s Correlation and Partial Correlation Analyses (Controlling for TOC or TN) between GNM Ra...
<p><b>A.-B.</b> Example cells from the test set for dataset 1 (OGB-1) and dataset 3 (GCaMP6s) show h...
<p>Correlation of structure frequencies of GC (two-letter) and GCAU (four-letter) sequences of lengt...
<p>Pearson correlations between BGS and BVF values in the outer region (left panel) and between BBS ...
<p>Pearson correlations between BGS and BVF values (left panel) and between BBS and BVF values (righ...
Correlation analysis of WNGF results with the backbone and threshold network on the regional trade n...
Correlations between estimated thresholds and true thresholds for MSD (blue squares) and the Andrich...
<p>All modules with size larger than 2 and B-score are included. A few modules whose B-score is 0 (...