Additional file 2: of Recombinant Expression and Bioactivity Comparison of Four Typical Fungal Immunomodulatory Proteins from Three Main Ganoderma Species

Additional file 3: of FGMP: assessing fungal genome completeness

Ousmane CissĂŠ (6590801)
Jason Stajich (5225312)

April 2019

Comparison of protein markers used for genome completeness estimation. (PDF 231 kb

Additional file 2: of Involvement of a dihydrodipicolinate synthase gene (FaDHDPS1) in fungal development, pathogenesis and stress responses in Fusarium asiaticum

Weichao Ren (5825006)
Jiting Tao (5825009)
Dongya Shi (5825012)
Wenchan Chen (5825015)
Changjun Chen (135093)

October 2018

Figure S1. Generation and identification of Fusarium asiaticum FaDHDPS1 gene deletion mutants. (A) G...

Additional file 2: of Molecular and functional evolution of the fungal diterpene synthase genes

Marc Fischer (1778896)
Camille Rustenhloz (3464234)
Véronique Leh-Louis (166350)
Guy Perrière (2074)

October 2015

Fungal exons (blue) and introns (black) in putative di-TPS genes. Fungal species are arranged in the...

Additional file 1: of Recombinant Expression and Bioactivity Comparison of Four Typical Fungal Immunomodulatory Proteins from Three Main Ganoderma Species

Zheng-Wei Qu (6087836)
Si-Ya Zhou (6087839)
Shi-Xin Guan (6087842)
Rui Gao (247606)
Zuo-Wen Duan (6087845)
Xin Zhang (35492)
Wei-Yan Sun (6087848)
Wen-Li Fan (6087851)
Shui-Sen Chen (6087854)
Li-Jing Chen (4742706)
Jing-Wei Lin (6087857)
Yan-Ye Ruan (6087860)

December 2018

Homology between different Ganoderma FIPs based on their peptide sequence alignment using a DNAman s...

Additional file 3: of Recombinant Expression and Bioactivity Comparison of Four Typical Fungal Immunomodulatory Proteins from Three Main Ganoderma Species

Zheng-Wei Qu (6087836)
Si-Ya Zhou (6087839)
Shi-Xin Guan (6087842)
Rui Gao (247606)
Zuo-Wen Duan (6087845)
Xin Zhang (35492)
Wei-Yan Sun (6087848)
Wen-Li Fan (6087851)
Shui-Sen Chen (6087854)
Li-Jing Chen (4742706)
Jing-Wei Lin (6087857)
Yan-Ye Ruan (6087860)

December 2018

Schematic map of synthetic Ganoderma FIP genes. Four codon-optimized FIP genes were synthesized (in ...

Additional file 4: of Recombinant Expression and Bioactivity Comparison of Four Typical Fungal Immunomodulatory Proteins from Three Main Ganoderma Species

Zheng-Wei Qu (6087836)
Si-Ya Zhou (6087839)
Shi-Xin Guan (6087842)
Rui Gao (247606)
Zuo-Wen Duan (6087845)
Xin Zhang (35492)
Wei-Yan Sun (6087848)
Wen-Li Fan (6087851)
Shui-Sen Chen (6087854)
Li-Jing Chen (4742706)
Jing-Wei Lin (6087857)
Yan-Ye Ruan (6087860)

December 2018

Haemagglutination examination of four recombinant Ganoderma FIPs including rFIP-gap1, rFIP-gap2, rLZ...

Additional file 2: of Transciptome profiling at early infection of Elaeis guineensis by Ganoderma boninense provides novel insights on fungal transition from biotrophic to necrotrophic phase

Mohammad Bahari (6164225)
Nurshafika Sakeh (6164228)
Siti Abdullah (6164231)
Redzyque Ramli (6164234)
Saied Kadkhodaei (6164237)

December 2018

Top-hit species distribution of best-aligned gene annotations with highest percentage of similarity ...

Additional file 1: of Prediction of pathogenicity genes involved in adaptation to a lupin host in the fungal pathogens Botrytis cinerea and Sclerotinia sclerotiorum via comparative genomics

Mahsa Mousavi-Derazmahalleh (6524222)
Steven Chang (271406)
Geoff Thomas (5716226)
Mark Derbyshire (6712010)
Phillip Bayer (6712016)
David Edwards (5663)
Matthew Nelson (1902790)
William Erskine (1806280)
Francisco Lopez-Ruiz (6712022)
Jon Clements (614685)
James Hane (3539561)

May 2019

Statistically significant overâ/under-representation of pfam functional annotations between pathog...

Additional file 2: of Prediction of pathogenicity genes involved in adaptation to a lupin host in the fungal pathogens Botrytis cinerea and Sclerotinia sclerotiorum via comparative genomics

Mahsa Mousavi-Derazmahalleh (6524222)
Steven Chang (271406)
Geoff Thomas (5716226)
Mark Derbyshire (6712010)
Phillip Bayer (6712016)
David Edwards (5663)
Matthew Nelson (1902790)
William Erskine (1806280)
Francisco Lopez-Ruiz (6712022)
Jon Clements (614685)
James Hane (3539561)

May 2019

Information supporting effector prediction, orthology, functional annotations, mutations and PAV acr...

Additional file 2: of Whole genome sequencing and comparative genomics of closely related Fusarium Head Blight fungi: Fusarium graminearum, F. meridionale and F. asiaticum

Sean Walkowiak (203653)
Owen Rowland (1348)
Nicolas Rodrigue (21473)
Rajagopal Subramaniam (203664)

December 2016

Summary tables for gene conservation, variation, annotation, and functional enrichment analyses. Des...

Additional file 1 of Efficient expression of heterologous genes by the introduction of the endogenous glyceraldehyde-3-phosphate dehydrogenase gene intron 1 in Ganoderma lucidum

Hao You (11203806)
Bin Sun (210373)
Na Li (6550)
Jun-Wei Xu (11310210)

August 2021

Additional file 1. Data S1. The synthesized gene sequence. Fig. S1. Selection of phosphinothrin-resi...

Additional file 2: of Phospholipid homeostasis plays an important role in fungal development, fungicide resistance and virulence in Fusarium graminearum

Jing Wang (6206297)
Haixia Wang (173360)
Chenying Zhang (4268290)
Tianjing Wu (2001511)
Zhonghua Ma (194585)
Yun Chen (279569)

April 2019

Figure S1. Schematic representation of gene disruption strategy and Southern blot analyses of the de...

Additional file 1: of Transciptome profiling at early infection of Elaeis guineensis by Ganoderma boninense provides novel insights on fungal transition from biotrophic to necrotrophic phase

Mohammad Bahari (6164225)
Nurshafika Sakeh (6164228)
Siti Abdullah (6164231)
Redzyque Ramli (6164234)
Saied Kadkhodaei (6164237)

December 2018

Alignment of Ganoderma boninense PER71 ITS1/2 sequence with sequenced amplicon of normal and nested ...

Additional file 5: of Transciptome profiling at early infection of Elaeis guineensis by Ganoderma boninense provides novel insights on fungal transition from biotrophic to necrotrophic phase

Mohammad Bahari (6164225)
Nurshafika Sakeh (6164228)
Siti Abdullah (6164231)
Redzyque Ramli (6164234)
Saied Kadkhodaei (6164237)

December 2018

PCR efficiency, R2 value and slope value for the three reference genes. (PPTX 38 kb

Additional file 1: of Comparative evolutionary histories of fungal proteases reveal gene gains in the mycoparasitic and nematode-parasitic fungus Clonostachys rosea

Mudassir Iqbal (537102)
Mukesh Dubey (5944586)
Mikael Gudmundsson (5743373)
Maria Viketoft (2916590)
Dan Jensen (3815518)
Magnus Karlsson (150089)

November 2018

Table S1. Protease genes in different fungal genomes arranged according to MEROPS peptidase database...

Additional file 3: of FGMP: assessing fungal genome completeness

Ousmane CissĂŠ (6590801)
Jason Stajich (5225312)

April 2019

Comparison of protein markers used for genome completeness estimation. (PDF 231 kb

Additional file 2: of Involvement of a dihydrodipicolinate synthase gene (FaDHDPS1) in fungal development, pathogenesis and stress responses in Fusarium asiaticum

Weichao Ren (5825006)
Jiting Tao (5825009)
Dongya Shi (5825012)
Wenchan Chen (5825015)
Changjun Chen (135093)

October 2018

Figure S1. Generation and identification of Fusarium asiaticum FaDHDPS1 gene deletion mutants. (A) G...

Additional file 2: of Molecular and functional evolution of the fungal diterpene synthase genes

Marc Fischer (1778896)
Camille Rustenhloz (3464234)
Véronique Leh-Louis (166350)
Guy Perrière (2074)

October 2015

Fungal exons (blue) and introns (black) in putative di-TPS genes. Fungal species are arranged in the...

Additional file 1: of Recombinant Expression and Bioactivity Comparison of Four Typical Fungal Immunomodulatory Proteins from Three Main Ganoderma Species

Zheng-Wei Qu (6087836)
Si-Ya Zhou (6087839)
Shi-Xin Guan (6087842)
Rui Gao (247606)
Zuo-Wen Duan (6087845)
Xin Zhang (35492)
Wei-Yan Sun (6087848)
Wen-Li Fan (6087851)
Shui-Sen Chen (6087854)
Li-Jing Chen (4742706)
Jing-Wei Lin (6087857)
Yan-Ye Ruan (6087860)

December 2018

Homology between different Ganoderma FIPs based on their peptide sequence alignment using a DNAman s...

Additional file 3: of Recombinant Expression and Bioactivity Comparison of Four Typical Fungal Immunomodulatory Proteins from Three Main Ganoderma Species

Zheng-Wei Qu (6087836)
Si-Ya Zhou (6087839)
Shi-Xin Guan (6087842)
Rui Gao (247606)
Zuo-Wen Duan (6087845)
Xin Zhang (35492)
Wei-Yan Sun (6087848)
Wen-Li Fan (6087851)
Shui-Sen Chen (6087854)
Li-Jing Chen (4742706)
Jing-Wei Lin (6087857)
Yan-Ye Ruan (6087860)

December 2018

Schematic map of synthetic Ganoderma FIP genes. Four codon-optimized FIP genes were synthesized (in ...

Additional file 4: of Recombinant Expression and Bioactivity Comparison of Four Typical Fungal Immunomodulatory Proteins from Three Main Ganoderma Species

Zheng-Wei Qu (6087836)
Si-Ya Zhou (6087839)
Shi-Xin Guan (6087842)
Rui Gao (247606)
Zuo-Wen Duan (6087845)
Xin Zhang (35492)
Wei-Yan Sun (6087848)
Wen-Li Fan (6087851)
Shui-Sen Chen (6087854)
Li-Jing Chen (4742706)
Jing-Wei Lin (6087857)
Yan-Ye Ruan (6087860)

December 2018

Haemagglutination examination of four recombinant Ganoderma FIPs including rFIP-gap1, rFIP-gap2, rLZ...

Additional file 2: of Transciptome profiling at early infection of Elaeis guineensis by Ganoderma boninense provides novel insights on fungal transition from biotrophic to necrotrophic phase

Mohammad Bahari (6164225)
Nurshafika Sakeh (6164228)
Siti Abdullah (6164231)
Redzyque Ramli (6164234)
Saied Kadkhodaei (6164237)

December 2018

Top-hit species distribution of best-aligned gene annotations with highest percentage of similarity ...

Additional file 1: of Prediction of pathogenicity genes involved in adaptation to a lupin host in the fungal pathogens Botrytis cinerea and Sclerotinia sclerotiorum via comparative genomics

Mahsa Mousavi-Derazmahalleh (6524222)
Steven Chang (271406)
Geoff Thomas (5716226)
Mark Derbyshire (6712010)
Phillip Bayer (6712016)
David Edwards (5663)
Matthew Nelson (1902790)
William Erskine (1806280)
Francisco Lopez-Ruiz (6712022)
Jon Clements (614685)
James Hane (3539561)

May 2019

Statistically significant overâ/under-representation of pfam functional annotations between pathog...

Additional file 2: of Prediction of pathogenicity genes involved in adaptation to a lupin host in the fungal pathogens Botrytis cinerea and Sclerotinia sclerotiorum via comparative genomics

Mahsa Mousavi-Derazmahalleh (6524222)
Steven Chang (271406)
Geoff Thomas (5716226)
Mark Derbyshire (6712010)
Phillip Bayer (6712016)
David Edwards (5663)
Matthew Nelson (1902790)
William Erskine (1806280)
Francisco Lopez-Ruiz (6712022)
Jon Clements (614685)
James Hane (3539561)

May 2019

Information supporting effector prediction, orthology, functional annotations, mutations and PAV acr...

Additional file 2: of Whole genome sequencing and comparative genomics of closely related Fusarium Head Blight fungi: Fusarium graminearum, F. meridionale and F. asiaticum

Sean Walkowiak (203653)
Owen Rowland (1348)
Nicolas Rodrigue (21473)
Rajagopal Subramaniam (203664)

December 2016

Summary tables for gene conservation, variation, annotation, and functional enrichment analyses. Des...

Additional file 1 of Efficient expression of heterologous genes by the introduction of the endogenous glyceraldehyde-3-phosphate dehydrogenase gene intron 1 in Ganoderma lucidum

Hao You (11203806)
Bin Sun (210373)
Na Li (6550)
Jun-Wei Xu (11310210)

August 2021

Additional file 1. Data S1. The synthesized gene sequence. Fig. S1. Selection of phosphinothrin-resi...

Additional file 2: of Phospholipid homeostasis plays an important role in fungal development, fungicide resistance and virulence in Fusarium graminearum

Jing Wang (6206297)
Haixia Wang (173360)
Chenying Zhang (4268290)
Tianjing Wu (2001511)
Zhonghua Ma (194585)
Yun Chen (279569)

April 2019

Figure S1. Schematic representation of gene disruption strategy and Southern blot analyses of the de...

Additional file 1: of Transciptome profiling at early infection of Elaeis guineensis by Ganoderma boninense provides novel insights on fungal transition from biotrophic to necrotrophic phase

Mohammad Bahari (6164225)
Nurshafika Sakeh (6164228)
Siti Abdullah (6164231)
Redzyque Ramli (6164234)
Saied Kadkhodaei (6164237)

December 2018

Alignment of Ganoderma boninense PER71 ITS1/2 sequence with sequenced amplicon of normal and nested ...

Additional file 5: of Transciptome profiling at early infection of Elaeis guineensis by Ganoderma boninense provides novel insights on fungal transition from biotrophic to necrotrophic phase

Mohammad Bahari (6164225)
Nurshafika Sakeh (6164228)
Siti Abdullah (6164231)
Redzyque Ramli (6164234)
Saied Kadkhodaei (6164237)

December 2018

PCR efficiency, R2 value and slope value for the three reference genes. (PPTX 38 kb

Additional file 1: of Comparative evolutionary histories of fungal proteases reveal gene gains in the mycoparasitic and nematode-parasitic fungus Clonostachys rosea

Mudassir Iqbal (537102)
Mukesh Dubey (5944586)
Mikael Gudmundsson (5743373)
Maria Viketoft (2916590)
Dan Jensen (3815518)
Magnus Karlsson (150089)

November 2018

Table S1. Protease genes in different fungal genomes arranged according to MEROPS peptidase database...

Additional file 3: of FGMP: assessing fungal genome completeness

Ousmane CissĂŠ (6590801)
Jason Stajich (5225312)

April 2019

Comparison of protein markers used for genome completeness estimation. (PDF 231 kb

Additional file 2: of Involvement of a dihydrodipicolinate synthase gene (FaDHDPS1) in fungal development, pathogenesis and stress responses in Fusarium asiaticum

Weichao Ren (5825006)
Jiting Tao (5825009)
Dongya Shi (5825012)
Wenchan Chen (5825015)
Changjun Chen (135093)

October 2018

Figure S1. Generation and identification of Fusarium asiaticum FaDHDPS1 gene deletion mutants. (A) G...

Additional file 2: of Molecular and functional evolution of the fungal diterpene synthase genes

Marc Fischer (1778896)
Camille Rustenhloz (3464234)
Véronique Leh-Louis (166350)
Guy Perrière (2074)

October 2015

Fungal exons (blue) and introns (black) in putative di-TPS genes. Fungal species are arranged in the...

Additional file 2: of Recombinant Expression and Bioactivity Comparison of Four Typical Fungal Immunomodulatory Proteins from Three Main Ganoderma Species

Abstract

Extracted data

Additional file 2: of Recombinant Expression and Bioactivity Comparison of Four Typical Fungal Immunomodulatory Proteins from Three Main Ganoderma Species

Abstract

Extracted data

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