About 5 μg HBc protein from the indicated CLP preparations were directly loaded (Ø), or after 30 min incubation in non-denaturing 6x DNA loading buffer (Ø*) or in SDS-containing DNA loading buffer (NEB Purple) at the indicated final SDS concentrations, then analyzed by NAGE. A 1 kb DNA ladder (M) plus 1 μg of untreated HBc183 CLPs served as markers. EB fluorescence signals (top) were recorded using a laser scanner (excitation 532 nm/O580 nm filter). Proteins were subsequently stained by CB. In all samples the intact CLP bands became fuzzier at 0.024% SDS compared to the untreated controls, and a distinct upward mobility shift occurred at 0.048% SDS. For the non-phosphorylated CLPs (-SRPK1) this was accompanied by visible release of RNA.</p
<p>(<b>A</b>) RNAi treatment alters S2R+ cell H148Q-YFP fluorescence levels. Heat map plate reader d...
Electrophoretic mobility shift assays were performed as described in Methods using His-tagged ClnR a...
(A -B) RNA-Seq analysis compares normalized RNA-Seq reads (RPKB) aligned with the genomic locus of L...
(A) Full cleavage of accessible but not CLP-borne CTD regardless of phosphorylation. NHis-GFP-CTD fu...
(A) Visualization of RNA content in HBc183_F97L CLPs by NAGE and RNA vs. protein staining. HBc183_F9...
<p>ClpB (1 μM) was incubated at 37°C for the indicated periods with 5 ng of trypsin in the absence o...
(A) Position of S/T>A mutations, dominant m/z peak observed and calculated MH+ mass of best-fitting ...
<p>A) The wt and Arg173Pro variants (0.2 mg/mL) were incubated (either at pH 7.4 or 5.0) in the abse...
<p>(A) Quantitative PCR to determine transcript levels of over-represented proteins upon depletion o...
Samples from the indicated gradient-enriched CLPs expressed alone (-) or coexpressed with SRPK1 (+) ...
<p>The WT HBc, or the linker deletion and substitution mutants were translated in RRL. The translate...
(A) Cib1-GFP was monitored by fluorescence microscopy. Cells of indicated strains were incubated as ...
(A) The purification of CLPB-N92, analyzing by size-exclusion chromatography (left) and SDS-PAGE (ri...
Proteins are covalently trapped on DNA to form DNA–protein crosslinks (DPCs) when cells are ex...
<p>Effect of cytoplasmic enzymes on DC-PCR (<b>A</b>). KMS-12-PE cells were diluted at 1∶25 in hypot...
<p>(<b>A</b>) RNAi treatment alters S2R+ cell H148Q-YFP fluorescence levels. Heat map plate reader d...
Electrophoretic mobility shift assays were performed as described in Methods using His-tagged ClnR a...
(A -B) RNA-Seq analysis compares normalized RNA-Seq reads (RPKB) aligned with the genomic locus of L...
(A) Full cleavage of accessible but not CLP-borne CTD regardless of phosphorylation. NHis-GFP-CTD fu...
(A) Visualization of RNA content in HBc183_F97L CLPs by NAGE and RNA vs. protein staining. HBc183_F9...
<p>ClpB (1 μM) was incubated at 37°C for the indicated periods with 5 ng of trypsin in the absence o...
(A) Position of S/T>A mutations, dominant m/z peak observed and calculated MH+ mass of best-fitting ...
<p>A) The wt and Arg173Pro variants (0.2 mg/mL) were incubated (either at pH 7.4 or 5.0) in the abse...
<p>(A) Quantitative PCR to determine transcript levels of over-represented proteins upon depletion o...
Samples from the indicated gradient-enriched CLPs expressed alone (-) or coexpressed with SRPK1 (+) ...
<p>The WT HBc, or the linker deletion and substitution mutants were translated in RRL. The translate...
(A) Cib1-GFP was monitored by fluorescence microscopy. Cells of indicated strains were incubated as ...
(A) The purification of CLPB-N92, analyzing by size-exclusion chromatography (left) and SDS-PAGE (ri...
Proteins are covalently trapped on DNA to form DNA–protein crosslinks (DPCs) when cells are ex...
<p>Effect of cytoplasmic enzymes on DC-PCR (<b>A</b>). KMS-12-PE cells were diluted at 1∶25 in hypot...
<p>(<b>A</b>) RNAi treatment alters S2R+ cell H148Q-YFP fluorescence levels. Heat map plate reader d...
Electrophoretic mobility shift assays were performed as described in Methods using His-tagged ClnR a...
(A -B) RNA-Seq analysis compares normalized RNA-Seq reads (RPKB) aligned with the genomic locus of L...