Non-Hox neighbours of Hox11/13d-e in our study species. Sheets list names, gene/transcript IDs, genomic locations, conserved domain contents and best BLAST hits for the non-Hox protein-coding genes on each scaffold examined. Hox scaffold accessions and the exact locations of Hox11/13d-e within their scaffolds are also given, as well as the full inferred protein sequences of Hox11/13d-e. (XLSX 75 kb
SummaryGenomic comparisons of chordates, hemichordates, and echinoderms can inform hypotheses for th...
ABSTRACT—Peronella japonica is a direct-type developing sea urchin that metamorphoses in 3 days with...
Hox protein sequences used for construction of the phylogeny shown in Additional file 3: Figure S5....
Distributions of conserved motifs in ambulacrarian Posterior Hox proteins. (XLSX 15 kb
Full flanked Hox alignment used in phylogenetic analyses. The HD-only analyses (Additional files 1 a...
Bayesian tree of deuterostome Posterior Hox homeodomains without flanking sequences. Highlights and ...
Motif alignments and locations. 1. Curated alignments of all echinoderm and hemichordate instances o...
Background: Hox genes are key elements in patterning animal development. They are renowned for their...
The organization of echinoderm Hox clusters is of interest due to the role that Hox genes play in de...
Amino acid sequences used for the analysis of Hox genes of Halocynthia roretzi (Hr) by construction ...
Summary: The organization of echinoderm Hox clusters is of interest due to the role that Hox genes p...
Bayesian phylogenetic analysis including P. californiensis Hox genes. Bf; Branchiostoma floridae (Ce...
The Strongylocentrotus purpuratus genome contains a single ten-gene Hox complex >0.5 megabase in len...
Bayesian phylogenetic analysis including P. californiensis and M. alaskensis Six family genes. Mm; M...
The formation of gill slits is a homologous trait in most deuterostomes (including hemichordates, tu...
SummaryGenomic comparisons of chordates, hemichordates, and echinoderms can inform hypotheses for th...
ABSTRACT—Peronella japonica is a direct-type developing sea urchin that metamorphoses in 3 days with...
Hox protein sequences used for construction of the phylogeny shown in Additional file 3: Figure S5....
Distributions of conserved motifs in ambulacrarian Posterior Hox proteins. (XLSX 15 kb
Full flanked Hox alignment used in phylogenetic analyses. The HD-only analyses (Additional files 1 a...
Bayesian tree of deuterostome Posterior Hox homeodomains without flanking sequences. Highlights and ...
Motif alignments and locations. 1. Curated alignments of all echinoderm and hemichordate instances o...
Background: Hox genes are key elements in patterning animal development. They are renowned for their...
The organization of echinoderm Hox clusters is of interest due to the role that Hox genes play in de...
Amino acid sequences used for the analysis of Hox genes of Halocynthia roretzi (Hr) by construction ...
Summary: The organization of echinoderm Hox clusters is of interest due to the role that Hox genes p...
Bayesian phylogenetic analysis including P. californiensis Hox genes. Bf; Branchiostoma floridae (Ce...
The Strongylocentrotus purpuratus genome contains a single ten-gene Hox complex >0.5 megabase in len...
Bayesian phylogenetic analysis including P. californiensis and M. alaskensis Six family genes. Mm; M...
The formation of gill slits is a homologous trait in most deuterostomes (including hemichordates, tu...
SummaryGenomic comparisons of chordates, hemichordates, and echinoderms can inform hypotheses for th...
ABSTRACT—Peronella japonica is a direct-type developing sea urchin that metamorphoses in 3 days with...
Hox protein sequences used for construction of the phylogeny shown in Additional file 3: Figure S5....