Figure S2. Gene ontology (GO) classification of differentially accumulated proteins. (A) Up-regulated proteins with S2 treatment compared to S0 treatment; (B) down-regulated proteins with S2 treatment compared to S0 treatment; (C) up-regulated proteins with S4 treatment compared to S0 treatment; and (D) down-regulated proteins with S4 treatment compared to S0 treatment. S0 refers to control (no leaf removal); S2 and S4 refer to the removal of two and four uppermost leaves, respectively. (PDF 199 kb
Mapping efficiency statistics. Y and Z represent ‘Yayu889’ and ‘Zhenghong532,’ respectively; 1, 2, 3...
Figure S4. Protein-protein interaction network analysis predicted for genes commonly regulated in fi...
Table S1. List of genes studied. Table S2. One-way ANOVA results of root gene expression between con...
Figure S1. The Pearson correlation analysis of the three replicates of each treatment. S0 refers to ...
Figure S4. Effects of leaf removal on relative expression of defense related proteins (A) and the en...
Table S3. Differences in protein abundances between the four-leaf removal treatment (S4) and the con...
Figure S3. Effects of leaf removal on relative expression of photosynthesis related proteins (A), th...
Correlation between RNA and protein at a pathway level. Three pairwise comparisons based on the T0, ...
The RNA-Seq studies used in the analysis. Table S4. Selected gene modules identified from the networ...
Figure S6. The growth-related genes and the defense-related genes showed conversely abrupt expressio...
Figure S2. Molecular function GO terms over-represented (Fisher Test, Benjamini-Hochberg adjusted p-...
GO analysis of the down-regulated differentially expressed common genes in the leaves of the rice ge...
Table S1. Fold changes of the expression of auxin-, kernel development- and defense- related genes a...
Gene Ontology categories of GO class “Molecular Function” significantly over-represented among trans...
Table S9. List of GO analysis (BP) for the specific common DEGs of 141 and DH40 (All GO terms shown ...
Mapping efficiency statistics. Y and Z represent ‘Yayu889’ and ‘Zhenghong532,’ respectively; 1, 2, 3...
Figure S4. Protein-protein interaction network analysis predicted for genes commonly regulated in fi...
Table S1. List of genes studied. Table S2. One-way ANOVA results of root gene expression between con...
Figure S1. The Pearson correlation analysis of the three replicates of each treatment. S0 refers to ...
Figure S4. Effects of leaf removal on relative expression of defense related proteins (A) and the en...
Table S3. Differences in protein abundances between the four-leaf removal treatment (S4) and the con...
Figure S3. Effects of leaf removal on relative expression of photosynthesis related proteins (A), th...
Correlation between RNA and protein at a pathway level. Three pairwise comparisons based on the T0, ...
The RNA-Seq studies used in the analysis. Table S4. Selected gene modules identified from the networ...
Figure S6. The growth-related genes and the defense-related genes showed conversely abrupt expressio...
Figure S2. Molecular function GO terms over-represented (Fisher Test, Benjamini-Hochberg adjusted p-...
GO analysis of the down-regulated differentially expressed common genes in the leaves of the rice ge...
Table S1. Fold changes of the expression of auxin-, kernel development- and defense- related genes a...
Gene Ontology categories of GO class “Molecular Function” significantly over-represented among trans...
Table S9. List of GO analysis (BP) for the specific common DEGs of 141 and DH40 (All GO terms shown ...
Mapping efficiency statistics. Y and Z represent ‘Yayu889’ and ‘Zhenghong532,’ respectively; 1, 2, 3...
Figure S4. Protein-protein interaction network analysis predicted for genes commonly regulated in fi...
Table S1. List of genes studied. Table S2. One-way ANOVA results of root gene expression between con...