Additional file 1: of Kidney disease risk factors associate with urine biomarkers concentrations in HIV-positive persons; a cross-sectional study

Anthony Muiru (6173771)
Michael Shlipak (198108)
Rebecca Scherzer (198092)
William Zhang (6173774)
Simon Ascher (6173777)
Vasantha Jotwani (6173780)
Carl Grunfeld (198113)
Chirag Parikh (3759676)
Derek Ng (6173783)
Frank Palella (6173786)
Ken Ho (3013458)
Seble Kassaye (247798)
Anjali Sharma (538603)
Mardge Cohen (235024)
Ruibin Wang (1959997)
Qibin Qi (172143)
Michelle Estrella (752514)

Publication date

January 2019

DOI

10.6084/m9.figshare.7546157.v1

Abstract

Table S1. Urine biomarker Assay information. Table showing each biomarker assay information including intra-assay coefficients of variation for all biomarkers used in this analysis. (DOCX 16 kb

Extracted data

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Data Protection

Additional file 1: of Kidney disease risk factors associate with urine biomarkers concentrations in HIV-positive persons; a cross-sectional study

Anthony Muiru (6173771)
Michael Shlipak (198108)
Rebecca Scherzer (198092)
William Zhang (6173774)
Simon Ascher (6173777)
Vasantha Jotwani (6173780)
Carl Grunfeld (198113)
Chirag Parikh (3759676)
Derek Ng (6173783)
Frank Palella (6173786)
Ken Ho (3013458)
Seble Kassaye (247798)
Anjali Sharma (538603)
Mardge Cohen (235024)
Ruibin Wang (1959997)
Qibin Qi (172143)
Michelle Estrella (752514)

Open link

Publication date

January 2019

DOI

10.6084/m9.figshare.7546157.v1

Abstract

Table S1. Urine biomarker Assay information. Table showing each biomarker assay information including intra-assay coefficients of variation for all biomarkers used in this analysis. (DOCX 16 kb

Extracted data

Adi Kurniawan (6620738)
Chien-Yeh Hsu (345486)
Hsiao-Hsien Rau (3159642)
Li-Yin Lin (6620741)
Jane Chao (4609054)

April 2019

Table S1. Adjusted Spearmanâs correlation coefficient (r) between the variables and estimated glom...

Additional file 2: of Association of kidney disease measures with risk of renal function worsening in patients with type 1 diabetes

Antonio Mirijello (4818981)
Francesca Viazzi (675398)
Paola Fioretto (3935144)
Carlo Giorda (327489)
Antonio Ceriello (60179)
Giuspina Russo (6051023)
Pietro Guida (3935147)
Roberto Pontremoli (675396)
Salvatore Cosmo (5577164)

December 2018

Table S2. Baseline clinical characteristics of patients grouped by eGFR and albuminuria. (DOCX 19 kb

Kidney disease risk factors associate with urine biomarkers concentrations in HIV-positive persons; a cross-sectional study

Anthony N. Muiru
Michael G. Shlipak
Rebecca Scherzer
William R. Zhang
Simon B. Ascher
Vasantha Jotwani
Carl Grunfeld
Chirag R. Parikh
Derek Ng
Frank J. Palella
Ken Ho
Seble Kassaye
Anjali Sharma
Mardge Cohen
Ruibin Wang
Qibin Qi
Michelle M. Estrella

January 2019

Abstract Background HIV-positive persons bear an excess burden of chronic kidney disease (CKD); howe...

Additional file 1: of Relation of multi-marker panel to incident chronic kidney disease and rapid kidney function decline in African Americans: the Jackson Heart Study

Stanford Mwasongwe (5776382)
Bessie Young (5776385)
Aurelian Bidulescu (174668)
Mario Sims (412259)
Adolfo Correa (610800)
Solomon Musani (174786)

September 2018

Table S1. Comparing characteristics of the Included versus Excluded Participants. Table S2. Baseline...

Additional file 1: of Urinary epidermal growth factor, monocyte chemoattractant protein-1 or their ratio as predictors for rapid loss of renal function in type 2 diabetic patients with diabetic kidney disease

Bancha Satirapoj (726102)
Rattanawan Dispan (5779028)
Piyanuch Radinahamed (5779031)
Chagriya Kitiyakara (4254571)

September 2018

Table S1. Correlation of baseline urine MCP-1, EGF and EGF/MCP-1 ratio with other markers of renal i...

Additional file 1: of Assessing known chronic kidney disease associated genetic variants in Saudi Arabian populations

Cyril Cyrus (5113268)
Samir Al-Mueilo (3577334)
Chittibabu Vatte (5113253)
Shahanas Chathoth (5113250)
Yun Li (692280)
Hatem Qutub (5113271)
Rudaynah Al Ali (5113262)
Fahad Al-Muhanna (3577298)
Matthew Lanktree (3577373)
Khaled Alkharsah (5113265)
Abdullah Al-Rubaish (2157838)
Brian Kim-Mozeleski (5113256)
Brendan Keating (56416)
Amein Al Ali (5113259)

April 2018

Table S1. One-way ANOVA comparing the various Biochemical parameters in patients stratified for ESRD...

Additional file 1: of Inflammation and micronutrient biomarkers predict clinical HIV treatment failure and incident active TB in HIV-infected adults: a case-control study

Rupak Shivakoti (5780642)
Nikhil Gupte (189999)
Srikanth Tripathy (143767)
Selvamuthu Poongulali (5780645)
Cecilia Kanyama (504116)
Sima Berendes (224927)
Sandra Cardoso (3765325)
Breno Santos (504115)
Alberto La Rosa (504114)
Noluthando Mwelase (696354)
Sandy Pillay (696352)
Wadzanai Samaneka (621063)
Cynthia Riviere (143755)
Patcharaphan Sugandhavesa (584460)
Robert Bollinger (375260)
Ashwin Balagopal (19837)
Richard Semba (4596058)
Parul Christian (548336)
Thomas Campbell (5301196)
Amita Gupta (21762)

September 2018

Table S1. Biomarker loadings for each factor in primary CTF analysis (Nâ=â290). (DOCX 18 kb

Additional file 3: of Inflammation and micronutrient biomarkers predict clinical HIV treatment failure and incident active TB in HIV-infected adults: a case-control study

Rupak Shivakoti (5780642)
Nikhil Gupte (189999)
Srikanth Tripathy (143767)
Selvamuthu Poongulali (5780645)
Cecilia Kanyama (504116)
Sima Berendes (224927)
Sandra Cardoso (3765325)
Breno Santos (504115)
Alberto La Rosa (504114)
Noluthando Mwelase (696354)
Sandy Pillay (696352)
Wadzanai Samaneka (621063)
Cynthia Riviere (143755)
Patcharaphan Sugandhavesa (584460)
Robert Bollinger (375260)
Ashwin Balagopal (19837)
Richard Semba (4596058)
Parul Christian (548336)
Thomas Campbell (5301196)
Amita Gupta (21762)

September 2018

Table S3. Biomarker loadings for factors in virologic failure analysis (Nâ=â260). (DOCX 15 kb

Additional file 5: of Inflammation and micronutrient biomarkers predict clinical HIV treatment failure and incident active TB in HIV-infected adults: a case-control study

Rupak Shivakoti (5780642)
Nikhil Gupte (189999)
Srikanth Tripathy (143767)
Selvamuthu Poongulali (5780645)
Cecilia Kanyama (504116)
Sima Berendes (224927)
Sandra Cardoso (3765325)
Breno Santos (504115)
Alberto La Rosa (504114)
Noluthando Mwelase (696354)
Sandy Pillay (696352)
Wadzanai Samaneka (621063)
Cynthia Riviere (143755)
Patcharaphan Sugandhavesa (584460)
Robert Bollinger (375260)
Ashwin Balagopal (19837)
Richard Semba (4596058)
Parul Christian (548336)
Thomas Campbell (5301196)
Amita Gupta (21762)

September 2018

Table S5. Biomarker loadings for factors in incident active TB analysis (Nâ=â220). (DOCX 15 kb

Additional file 2: of Inflammation and micronutrient biomarkers predict clinical HIV treatment failure and incident active TB in HIV-infected adults: a case-control study

Rupak Shivakoti (5780642)
Nikhil Gupte (189999)
Srikanth Tripathy (143767)
Selvamuthu Poongulali (5780645)
Cecilia Kanyama (504116)
Sima Berendes (224927)
Sandra Cardoso (3765325)
Breno Santos (504115)
Alberto La Rosa (504114)
Noluthando Mwelase (696354)
Sandy Pillay (696352)
Wadzanai Samaneka (621063)
Cynthia Riviere (143755)
Patcharaphan Sugandhavesa (584460)
Robert Bollinger (375260)
Ashwin Balagopal (19837)
Richard Semba (4596058)
Parul Christian (548336)
Thomas Campbell (5301196)
Amita Gupta (21762)

September 2018

Table S2. Biomarker loadings for factors in severe outcomes analysis (Nâ=â254). (DOCX 15 kb

Additional file 1: of Urinary angiostatin: a novel biomarker of kidney disease associated with disease severity and progression

Yuan-Yuan Xia (6553616)
Ru Bu (840165)
Guang-Yan Cai (301489)
Xue-Guang Zhang (301471)
Shu-Wei Duan (6553619)
Jie Wu (10038)
Di Wu (23906)
Xiang-Mei Chen (301491)

April 2019

Table S1. Demographics and clinical characteristics of patients in the IgAN group. Table S2. Clinica...

Additional file 1: Table S1. of Cardiovascular risk is similar in patients with glomerulonephritis compared to other types of chronic kidney disease: a matched cohort study

Holly Hutton (3848926)
Adeera Levin (3415730)
Jagbir Gill (3848923)
Ognjenka Djurdjev (3848917)
Mila Tang (3848914)
Sean Barbour (3848920)

March 2017

The biomarker hazard ratios using Cox proportional hazards models that included GN vs non-GN CKD and...

Additional file 1: of The effects of add-on corticosteroids on renal outcomes in patients with biopsy proven HIV associated nephropathy: a single centre study from South Africa

Nicola Wearne (3932330)
Charles Swanepoel (6309929)
Maureen Duffield (663820)
Bianca Davidson (6264104)
Kathryn Manning (6264110)
Nicki Tiffin (8683)
Andrew Boulle (93997)
Brian Rayner (240977)
Priyanka Naidu (6309941)
Ikechi Okpechi (3453986)

February 2019

Table S1. CD4 count values and viral load non-suppression between baseline and 24âmonths. (DOCX 30...

Adi Kurniawan (6620738)
Chien-Yeh Hsu (345486)
Hsiao-Hsien Rau (3159642)
Li-Yin Lin (6620741)
Jane Chao (4609054)

April 2019

Table S1. Adjusted Spearmanâs correlation coefficient (r) between the variables and estimated glom...

Additional file 2: of Association of kidney disease measures with risk of renal function worsening in patients with type 1 diabetes

Antonio Mirijello (4818981)
Francesca Viazzi (675398)
Paola Fioretto (3935144)
Carlo Giorda (327489)
Antonio Ceriello (60179)
Giuspina Russo (6051023)
Pietro Guida (3935147)
Roberto Pontremoli (675396)
Salvatore Cosmo (5577164)

December 2018

Table S2. Baseline clinical characteristics of patients grouped by eGFR and albuminuria. (DOCX 19 kb

Kidney disease risk factors associate with urine biomarkers concentrations in HIV-positive persons; a cross-sectional study

Anthony N. Muiru
Michael G. Shlipak
Rebecca Scherzer
William R. Zhang
Simon B. Ascher
Vasantha Jotwani
Carl Grunfeld
Chirag R. Parikh
Derek Ng
Frank J. Palella
Ken Ho
Seble Kassaye
Anjali Sharma
Mardge Cohen
Ruibin Wang
Qibin Qi
Michelle M. Estrella

January 2019

Abstract Background HIV-positive persons bear an excess burden of chronic kidney disease (CKD); howe...

Additional file 1: of Relation of multi-marker panel to incident chronic kidney disease and rapid kidney function decline in African Americans: the Jackson Heart Study

Stanford Mwasongwe (5776382)
Bessie Young (5776385)
Aurelian Bidulescu (174668)
Mario Sims (412259)
Adolfo Correa (610800)
Solomon Musani (174786)

September 2018

Table S1. Comparing characteristics of the Included versus Excluded Participants. Table S2. Baseline...

Bancha Satirapoj (726102)
Rattanawan Dispan (5779028)
Piyanuch Radinahamed (5779031)
Chagriya Kitiyakara (4254571)

September 2018

Table S1. Correlation of baseline urine MCP-1, EGF and EGF/MCP-1 ratio with other markers of renal i...

Additional file 1: of Assessing known chronic kidney disease associated genetic variants in Saudi Arabian populations

Cyril Cyrus (5113268)
Samir Al-Mueilo (3577334)
Chittibabu Vatte (5113253)
Shahanas Chathoth (5113250)
Yun Li (692280)
Hatem Qutub (5113271)
Rudaynah Al Ali (5113262)
Fahad Al-Muhanna (3577298)
Matthew Lanktree (3577373)
Khaled Alkharsah (5113265)
Abdullah Al-Rubaish (2157838)
Brian Kim-Mozeleski (5113256)
Brendan Keating (56416)
Amein Al Ali (5113259)

April 2018

Table S1. One-way ANOVA comparing the various Biochemical parameters in patients stratified for ESRD...

Additional file 1: of Inflammation and micronutrient biomarkers predict clinical HIV treatment failure and incident active TB in HIV-infected adults: a case-control study

Rupak Shivakoti (5780642)
Nikhil Gupte (189999)
Srikanth Tripathy (143767)
Selvamuthu Poongulali (5780645)
Cecilia Kanyama (504116)
Sima Berendes (224927)
Sandra Cardoso (3765325)
Breno Santos (504115)
Alberto La Rosa (504114)
Noluthando Mwelase (696354)
Sandy Pillay (696352)
Wadzanai Samaneka (621063)
Cynthia Riviere (143755)
Patcharaphan Sugandhavesa (584460)
Robert Bollinger (375260)
Ashwin Balagopal (19837)
Richard Semba (4596058)
Parul Christian (548336)
Thomas Campbell (5301196)
Amita Gupta (21762)

September 2018

Table S1. Biomarker loadings for each factor in primary CTF analysis (Nâ=â290). (DOCX 18 kb

Additional file 3: of Inflammation and micronutrient biomarkers predict clinical HIV treatment failure and incident active TB in HIV-infected adults: a case-control study

Rupak Shivakoti (5780642)
Nikhil Gupte (189999)
Srikanth Tripathy (143767)
Selvamuthu Poongulali (5780645)
Cecilia Kanyama (504116)
Sima Berendes (224927)
Sandra Cardoso (3765325)
Breno Santos (504115)
Alberto La Rosa (504114)
Noluthando Mwelase (696354)
Sandy Pillay (696352)
Wadzanai Samaneka (621063)
Cynthia Riviere (143755)
Patcharaphan Sugandhavesa (584460)
Robert Bollinger (375260)
Ashwin Balagopal (19837)
Richard Semba (4596058)
Parul Christian (548336)
Thomas Campbell (5301196)
Amita Gupta (21762)

September 2018

Table S3. Biomarker loadings for factors in virologic failure analysis (Nâ=â260). (DOCX 15 kb

Additional file 5: of Inflammation and micronutrient biomarkers predict clinical HIV treatment failure and incident active TB in HIV-infected adults: a case-control study

Rupak Shivakoti (5780642)
Nikhil Gupte (189999)
Srikanth Tripathy (143767)
Selvamuthu Poongulali (5780645)
Cecilia Kanyama (504116)
Sima Berendes (224927)
Sandra Cardoso (3765325)
Breno Santos (504115)
Alberto La Rosa (504114)
Noluthando Mwelase (696354)
Sandy Pillay (696352)
Wadzanai Samaneka (621063)
Cynthia Riviere (143755)
Patcharaphan Sugandhavesa (584460)
Robert Bollinger (375260)
Ashwin Balagopal (19837)
Richard Semba (4596058)
Parul Christian (548336)
Thomas Campbell (5301196)
Amita Gupta (21762)

September 2018

Table S5. Biomarker loadings for factors in incident active TB analysis (Nâ=â220). (DOCX 15 kb

Additional file 2: of Inflammation and micronutrient biomarkers predict clinical HIV treatment failure and incident active TB in HIV-infected adults: a case-control study

Rupak Shivakoti (5780642)
Nikhil Gupte (189999)
Srikanth Tripathy (143767)
Selvamuthu Poongulali (5780645)
Cecilia Kanyama (504116)
Sima Berendes (224927)
Sandra Cardoso (3765325)
Breno Santos (504115)
Alberto La Rosa (504114)
Noluthando Mwelase (696354)
Sandy Pillay (696352)
Wadzanai Samaneka (621063)
Cynthia Riviere (143755)
Patcharaphan Sugandhavesa (584460)
Robert Bollinger (375260)
Ashwin Balagopal (19837)
Richard Semba (4596058)
Parul Christian (548336)
Thomas Campbell (5301196)
Amita Gupta (21762)

September 2018

Table S2. Biomarker loadings for factors in severe outcomes analysis (Nâ=â254). (DOCX 15 kb

Additional file 1: of Urinary angiostatin: a novel biomarker of kidney disease associated with disease severity and progression

Yuan-Yuan Xia (6553616)
Ru Bu (840165)
Guang-Yan Cai (301489)
Xue-Guang Zhang (301471)
Shu-Wei Duan (6553619)
Jie Wu (10038)
Di Wu (23906)
Xiang-Mei Chen (301491)

April 2019

Table S1. Demographics and clinical characteristics of patients in the IgAN group. Table S2. Clinica...

Additional file 1: Table S1. of Cardiovascular risk is similar in patients with glomerulonephritis compared to other types of chronic kidney disease: a matched cohort study

Holly Hutton (3848926)
Adeera Levin (3415730)
Jagbir Gill (3848923)
Ognjenka Djurdjev (3848917)
Mila Tang (3848914)
Sean Barbour (3848920)

March 2017

The biomarker hazard ratios using Cox proportional hazards models that included GN vs non-GN CKD and...

Additional file 1: of The effects of add-on corticosteroids on renal outcomes in patients with biopsy proven HIV associated nephropathy: a single centre study from South Africa

Nicola Wearne (3932330)
Charles Swanepoel (6309929)
Maureen Duffield (663820)
Bianca Davidson (6264104)
Kathryn Manning (6264110)
Nicki Tiffin (8683)
Andrew Boulle (93997)
Brian Rayner (240977)
Priyanka Naidu (6309941)
Ikechi Okpechi (3453986)

February 2019

Table S1. CD4 count values and viral load non-suppression between baseline and 24âmonths. (DOCX 30...

Adi Kurniawan (6620738)
Chien-Yeh Hsu (345486)
Hsiao-Hsien Rau (3159642)
Li-Yin Lin (6620741)
Jane Chao (4609054)

April 2019

Table S1. Adjusted Spearmanâs correlation coefficient (r) between the variables and estimated glom...

Additional file 2: of Association of kidney disease measures with risk of renal function worsening in patients with type 1 diabetes

Antonio Mirijello (4818981)
Francesca Viazzi (675398)
Paola Fioretto (3935144)
Carlo Giorda (327489)
Antonio Ceriello (60179)
Giuspina Russo (6051023)
Pietro Guida (3935147)
Roberto Pontremoli (675396)
Salvatore Cosmo (5577164)

December 2018

Table S2. Baseline clinical characteristics of patients grouped by eGFR and albuminuria. (DOCX 19 kb

Kidney disease risk factors associate with urine biomarkers concentrations in HIV-positive persons; a cross-sectional study

Anthony N. Muiru
Michael G. Shlipak
Rebecca Scherzer
William R. Zhang
Simon B. Ascher
Vasantha Jotwani
Carl Grunfeld
Chirag R. Parikh
Derek Ng
Frank J. Palella
Ken Ho
Seble Kassaye
Anjali Sharma
Mardge Cohen
Ruibin Wang
Qibin Qi
Michelle M. Estrella

January 2019

Abstract Background HIV-positive persons bear an excess burden of chronic kidney disease (CKD); howe...

Additional file 1: of Kidney disease risk factors associate with urine biomarkers concentrations in HIV-positive persons; a cross-sectional study

Abstract

Extracted data

Additional file 1: of Kidney disease risk factors associate with urine biomarkers concentrations in HIV-positive persons; a cross-sectional study

Abstract

Extracted data

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