MOESM3 of Global distribution of DNA hydroxymethylation and DNA methylation in chronic lymphocytic leukemia

MOESM9 of Regions of common inter-individual DNA methylation differences in human monocytes: genetic basis and potential function

Christopher Schröder (3530960)
Elsa Leitão (3530942)
Stefan Wallner (548742)
Gerd Schmitz (44452)
Ludger Klein-Hitpass (133366)
Anupam Sinha (1974100)
Karl-Heinz Jöckel (15194)
Stefanie Heilmann-Heimbach (3280875)
Per Hoffmann (429526)
Markus Nöthen (4279438)
Michael Steffens (4279411)
Peter Ebert (3530948)
Sven Rahmann (2715)
Bernhard Horsthemke (116259)

July 2017

Additional file 9. Methylation differences vs. changes in chromatin state. Distribution of DNA methy...

Repetitive DNA hypomethylation in the advanced phase of chronic myeloid leukemia

Roman-Gomez, J. (José)
Jimenez-Velasco, A. (A.)
Agirre-Ena, X. (Xabier)
Castillejo, J.A. (J.A.)
Navarro, G. (Germán)
San-Jose, E. (Edurne)
Garate, L. (Leire)
Cordeu, L. (Lucía)
Cervantes, F. (F.)
Prosper, F. (Felipe)
Heiniger, A. (A.)
Torres, A. (Antonio)

January 2007

Repetitive elements are heavily methylated in normal tissues, but hypomethylated in malignant tissue...

DNA Methylation and Intra-Clonal Heterogeneity: The Chronic Myeloid Leukemia Model

Benjamin Lebecque
Céline Bourgne
Véronique Vidal
Marc G. Berger

July 2021

Chronic Myeloid Leukemia (CML) is a model to investigate the impact of tumor intra-clonal heterogene...

MOESM6 of Global distribution of DNA hydroxymethylation and DNA methylation in chronic lymphocytic leukemia

Sara Wernig-Zorc (6182348)
Mukesh Yadav (4223692)
Pradeep Kopparapu (6182351)
Mats Bemark (6182354)
Hallgerdur Kristjansdottir (6182357)
Per-Ola Andersson (3479795)
Chandrasekhar Kanduri (378764)
Meena Kanduri (2592481)

January 2019

Additional file 6. List of REACTOME and GO Biological pathways from DhMRs obtained between CLL sampl...

MOESM2 of Global distribution of DNA hydroxymethylation and DNA methylation in chronic lymphocytic leukemia

Sara Wernig-Zorc (6182348)
Mukesh Yadav (4223692)
Pradeep Kopparapu (6182351)
Mats Bemark (6182354)
Hallgerdur Kristjansdottir (6182357)
Per-Ola Andersson (3479795)
Chandrasekhar Kanduri (378764)
Meena Kanduri (2592481)

January 2019

Additional file 2. Clinical and molecular data of patient samples and summary of obtained reads from...

Global distribution of DNA hydroxymethylation and DNA methylation in chronic lymphocytic leukemia

Sara Wernig-Zorc
Mukesh Pratap Yadav
Pradeep Kumar Kopparapu
Mats Bemark
Hallgerdur Lind Kristjansdottir
Per-Ola Andersson
Chandrasekhar Kanduri
Meena Kanduri

January 2019

Abstract Background Chronic lymphocytic leukemia (CLL) has been a good model system to understand th...

Analysis of DNA methylation profile of Korean chronic lymphocytic leukaemia (CLL) patients with MeDIP-Seq

Hwang, Seungwoo

June 2021

In this study, we performed genome-wide methylation profiling of eight CLL patients and five control...

Additional file 3: of Droplet digital PCR for the quantification of Alu methylation status in hematological malignancies

Paola Orsini (3564068)
Luciana Impera (3564071)
Elisa Parciante (6114650)
Cosimo Cumbo (3564065)
Crescenzio Minervini (3564089)
Angela Minervini (3564092)
Antonella Zagaria (3564074)
Luisa Anelli (3564086)
Nicoletta Coccaro (3564083)
Paola Casieri (3564095)
Giuseppina Tota (3564080)
Claudia Brunetti (203426)
Alessandra Ricco (6114659)
Paola Carluccio (6114662)
Giorgina Specchia (453927)
Francesco Albano (833659)

December 2018

Table S3. Molecular characteristics of the CMML patients retrospectively analyzed in this study. (DO...

Additional file 1: of Droplet digital PCR for the quantification of Alu methylation status in hematological malignancies

Paola Orsini (3564068)
Luciana Impera (3564071)
Elisa Parciante (6114650)
Cosimo Cumbo (3564065)
Crescenzio Minervini (3564089)
Angela Minervini (3564092)
Antonella Zagaria (3564074)
Luisa Anelli (3564086)
Nicoletta Coccaro (3564083)
Paola Casieri (3564095)
Giuseppina Tota (3564080)
Claudia Brunetti (203426)
Alessandra Ricco (6114659)
Paola Carluccio (6114662)
Giorgina Specchia (453927)
Francesco Albano (833659)

December 2018

Table S1. Clinical characteristics of the CLL patients included in the study. (DOCX 13 kb

Additional file 2: of Droplet digital PCR for the quantification of Alu methylation status in hematological malignancies

Paola Orsini (3564068)
Luciana Impera (3564071)
Elisa Parciante (6114650)
Cosimo Cumbo (3564065)
Crescenzio Minervini (3564089)
Angela Minervini (3564092)
Antonella Zagaria (3564074)
Luisa Anelli (3564086)
Nicoletta Coccaro (3564083)
Paola Casieri (3564095)
Giuseppina Tota (3564080)
Claudia Brunetti (203426)
Alessandra Ricco (6114659)
Paola Carluccio (6114662)
Giorgina Specchia (453927)
Francesco Albano (833659)

December 2018

Table S2. Clinical characteristics of the MDS patients retrospectively analyzed in this study. The n...

The study of DNA methylation anomalies in chronic lymphocytic leukaemia

Roy, NBA

January 2011

Many haematological malignancies are associated with widespread alterations of the transcriptional a...

Biological and clinical relevance of quantitative global methylation of repetitive DNA sequences in chronic lymphocytic leukemia

S. Fabris
V. Bollati
L. Agnelli
F. Morabito
V. Motta
G. Cutrona
S. Matis
A. Grazie Recchia
V. Gigliotti
M. Gentile
G. Lambertenghi Deliliers
P.A. Bertazzi
M. Ferrarini
A. Neri
A. Baccarelli

February 2011

Global DNA hypomethylation affecting repeat sequences has been reported in different cancer types. H...

Hypomethylation coordinates antagonistically with hypermethylation in cancer Development: a case study of leukemia

Kushwaha,Garima
Dozmorov,Mikhail
Wren,Jonathan D.
Qiu,Jing
Shi,Huidong
Xu,Dong

July 2016

Publisher's PDFBackground: Methylation changes are frequent in cancers, but understanding how hyper-...

Distinction of acute lymphoblastic leukemia from acute myeloid leukemia through microarray-based DNA methylation analysis

Scholz, C.
Nimmrich, I.
Burger, M.
Becker, E.
Doerken, B.
Ludwig, W.D.
Maier, S.

January 2005

Patterns of DNA methylation are substantially altered in malignancies compared to normal tissue, wit...

Additional file 1: of Sex-related DNA methylation differences in B cell chronic lymphocytic leukemia

Shuchun Lin (6182390)
Yun Liu (84346)
Lynn Goldin (73680)
Chen Lyu (6182393)
Xiangyin Kong (48989)
Yan Zhang (8098)
Neil Caporaso (186673)
Song Xiang (2510860)
Ying Gao (145030)

January 2019

Table S1. Samples for RNA-Seq analysis and replication of DNA methylation. Table S2. CLL subgroups o...

MOESM9 of Regions of common inter-individual DNA methylation differences in human monocytes: genetic basis and potential function

Christopher Schröder (3530960)
Elsa Leitão (3530942)
Stefan Wallner (548742)
Gerd Schmitz (44452)
Ludger Klein-Hitpass (133366)
Anupam Sinha (1974100)
Karl-Heinz Jöckel (15194)
Stefanie Heilmann-Heimbach (3280875)
Per Hoffmann (429526)
Markus Nöthen (4279438)
Michael Steffens (4279411)
Peter Ebert (3530948)
Sven Rahmann (2715)
Bernhard Horsthemke (116259)

July 2017

Additional file 9. Methylation differences vs. changes in chromatin state. Distribution of DNA methy...

Repetitive DNA hypomethylation in the advanced phase of chronic myeloid leukemia

Roman-Gomez, J. (José)
Jimenez-Velasco, A. (A.)
Agirre-Ena, X. (Xabier)
Castillejo, J.A. (J.A.)
Navarro, G. (Germán)
San-Jose, E. (Edurne)
Garate, L. (Leire)
Cordeu, L. (Lucía)
Cervantes, F. (F.)
Prosper, F. (Felipe)
Heiniger, A. (A.)
Torres, A. (Antonio)

January 2007

Repetitive elements are heavily methylated in normal tissues, but hypomethylated in malignant tissue...

DNA Methylation and Intra-Clonal Heterogeneity: The Chronic Myeloid Leukemia Model

Benjamin Lebecque
Céline Bourgne
Véronique Vidal
Marc G. Berger

July 2021

Chronic Myeloid Leukemia (CML) is a model to investigate the impact of tumor intra-clonal heterogene...

MOESM6 of Global distribution of DNA hydroxymethylation and DNA methylation in chronic lymphocytic leukemia

Sara Wernig-Zorc (6182348)
Mukesh Yadav (4223692)
Pradeep Kopparapu (6182351)
Mats Bemark (6182354)
Hallgerdur Kristjansdottir (6182357)
Per-Ola Andersson (3479795)
Chandrasekhar Kanduri (378764)
Meena Kanduri (2592481)

January 2019

Additional file 6. List of REACTOME and GO Biological pathways from DhMRs obtained between CLL sampl...

MOESM2 of Global distribution of DNA hydroxymethylation and DNA methylation in chronic lymphocytic leukemia

Sara Wernig-Zorc (6182348)
Mukesh Yadav (4223692)
Pradeep Kopparapu (6182351)
Mats Bemark (6182354)
Hallgerdur Kristjansdottir (6182357)
Per-Ola Andersson (3479795)
Chandrasekhar Kanduri (378764)
Meena Kanduri (2592481)

January 2019

Additional file 2. Clinical and molecular data of patient samples and summary of obtained reads from...

Global distribution of DNA hydroxymethylation and DNA methylation in chronic lymphocytic leukemia

Sara Wernig-Zorc
Mukesh Pratap Yadav
Pradeep Kumar Kopparapu
Mats Bemark
Hallgerdur Lind Kristjansdottir
Per-Ola Andersson
Chandrasekhar Kanduri
Meena Kanduri

January 2019

Abstract Background Chronic lymphocytic leukemia (CLL) has been a good model system to understand th...

Analysis of DNA methylation profile of Korean chronic lymphocytic leukaemia (CLL) patients with MeDIP-Seq

Hwang, Seungwoo

June 2021

In this study, we performed genome-wide methylation profiling of eight CLL patients and five control...

Additional file 3: of Droplet digital PCR for the quantification of Alu methylation status in hematological malignancies

Paola Orsini (3564068)
Luciana Impera (3564071)
Elisa Parciante (6114650)
Cosimo Cumbo (3564065)
Crescenzio Minervini (3564089)
Angela Minervini (3564092)
Antonella Zagaria (3564074)
Luisa Anelli (3564086)
Nicoletta Coccaro (3564083)
Paola Casieri (3564095)
Giuseppina Tota (3564080)
Claudia Brunetti (203426)
Alessandra Ricco (6114659)
Paola Carluccio (6114662)
Giorgina Specchia (453927)
Francesco Albano (833659)

December 2018

Table S3. Molecular characteristics of the CMML patients retrospectively analyzed in this study. (DO...

Additional file 1: of Droplet digital PCR for the quantification of Alu methylation status in hematological malignancies

Paola Orsini (3564068)
Luciana Impera (3564071)
Elisa Parciante (6114650)
Cosimo Cumbo (3564065)
Crescenzio Minervini (3564089)
Angela Minervini (3564092)
Antonella Zagaria (3564074)
Luisa Anelli (3564086)
Nicoletta Coccaro (3564083)
Paola Casieri (3564095)
Giuseppina Tota (3564080)
Claudia Brunetti (203426)
Alessandra Ricco (6114659)
Paola Carluccio (6114662)
Giorgina Specchia (453927)
Francesco Albano (833659)

December 2018

Table S1. Clinical characteristics of the CLL patients included in the study. (DOCX 13 kb

Additional file 2: of Droplet digital PCR for the quantification of Alu methylation status in hematological malignancies

Paola Orsini (3564068)
Luciana Impera (3564071)
Elisa Parciante (6114650)
Cosimo Cumbo (3564065)
Crescenzio Minervini (3564089)
Angela Minervini (3564092)
Antonella Zagaria (3564074)
Luisa Anelli (3564086)
Nicoletta Coccaro (3564083)
Paola Casieri (3564095)
Giuseppina Tota (3564080)
Claudia Brunetti (203426)
Alessandra Ricco (6114659)
Paola Carluccio (6114662)
Giorgina Specchia (453927)
Francesco Albano (833659)

December 2018

Table S2. Clinical characteristics of the MDS patients retrospectively analyzed in this study. The n...

The study of DNA methylation anomalies in chronic lymphocytic leukaemia

Roy, NBA

January 2011

Many haematological malignancies are associated with widespread alterations of the transcriptional a...

Biological and clinical relevance of quantitative global methylation of repetitive DNA sequences in chronic lymphocytic leukemia

S. Fabris
V. Bollati
L. Agnelli
F. Morabito
V. Motta
G. Cutrona
S. Matis
A. Grazie Recchia
V. Gigliotti
M. Gentile
G. Lambertenghi Deliliers
P.A. Bertazzi
M. Ferrarini
A. Neri
A. Baccarelli

February 2011

Global DNA hypomethylation affecting repeat sequences has been reported in different cancer types. H...

Hypomethylation coordinates antagonistically with hypermethylation in cancer Development: a case study of leukemia

Kushwaha,Garima
Dozmorov,Mikhail
Wren,Jonathan D.
Qiu,Jing
Shi,Huidong
Xu,Dong

July 2016

Publisher's PDFBackground: Methylation changes are frequent in cancers, but understanding how hyper-...

Distinction of acute lymphoblastic leukemia from acute myeloid leukemia through microarray-based DNA methylation analysis

Scholz, C.
Nimmrich, I.
Burger, M.
Becker, E.
Doerken, B.
Ludwig, W.D.
Maier, S.

January 2005

Patterns of DNA methylation are substantially altered in malignancies compared to normal tissue, wit...

Additional file 1: of Sex-related DNA methylation differences in B cell chronic lymphocytic leukemia

Shuchun Lin (6182390)
Yun Liu (84346)
Lynn Goldin (73680)
Chen Lyu (6182393)
Xiangyin Kong (48989)
Yan Zhang (8098)
Neil Caporaso (186673)
Song Xiang (2510860)
Ying Gao (145030)

January 2019

Table S1. Samples for RNA-Seq analysis and replication of DNA methylation. Table S2. CLL subgroups o...

MOESM9 of Regions of common inter-individual DNA methylation differences in human monocytes: genetic basis and potential function

Christopher Schröder (3530960)
Elsa Leitão (3530942)
Stefan Wallner (548742)
Gerd Schmitz (44452)
Ludger Klein-Hitpass (133366)
Anupam Sinha (1974100)
Karl-Heinz Jöckel (15194)
Stefanie Heilmann-Heimbach (3280875)
Per Hoffmann (429526)
Markus Nöthen (4279438)
Michael Steffens (4279411)
Peter Ebert (3530948)
Sven Rahmann (2715)
Bernhard Horsthemke (116259)

July 2017

Additional file 9. Methylation differences vs. changes in chromatin state. Distribution of DNA methy...

Repetitive DNA hypomethylation in the advanced phase of chronic myeloid leukemia

Roman-Gomez, J. (José)
Jimenez-Velasco, A. (A.)
Agirre-Ena, X. (Xabier)
Castillejo, J.A. (J.A.)
Navarro, G. (Germán)
San-Jose, E. (Edurne)
Garate, L. (Leire)
Cordeu, L. (Lucía)
Cervantes, F. (F.)
Prosper, F. (Felipe)
Heiniger, A. (A.)
Torres, A. (Antonio)

January 2007

Repetitive elements are heavily methylated in normal tissues, but hypomethylated in malignant tissue...

DNA Methylation and Intra-Clonal Heterogeneity: The Chronic Myeloid Leukemia Model

Benjamin Lebecque
Céline Bourgne
Véronique Vidal
Marc G. Berger

July 2021

Chronic Myeloid Leukemia (CML) is a model to investigate the impact of tumor intra-clonal heterogene...

MOESM3 of Global distribution of DNA hydroxymethylation and DNA methylation in chronic lymphocytic leukemia

Abstract

Extracted data

Topics

Related items

Related items