Additional file 2 of Diversity and evolution of the transposable element repertoire in arthropods with particular reference to insects

Additional file 12: of Large-scale analysis reveals that the genome features of simple sequence repeats are generally conserved at the family level in insects

Simin Ding (4575376)
Shuping Wang (466892)
Kang He (189002)
Mingxing Jiang (4575379)
Fei Li (143236)

November 2017

Figure S4. Phylogenetic analysis of 136 insect genomes using the relative abundance information from...

Evolution of genome content: Population dynamics of transposable elements in flies and humans

González Pérez, Josefa
Petrov, Dmitri A.

March 2015

Book Subtitle: Statistical and Computational MethodsRecent research is starting to shed light on the...

Additional file 1: of Evolutionary transitions in the Asteraceae coincide with marked shifts in transposable element abundance

S. Staton (3566690)
John Burke (578290)

August 2015

Displays the phylogenetic signal for TE superfamilies in the Asteraceae. (PDF 11 kb

Additional file 1 of Diversity and evolution of the transposable element repertoire in arthropods with particular reference to insects

Malte Petersen (3183417)
David ArmisĂŠn (6001937)
Richard Gibbs (144333)
Lars Hering (110405)
Abderrahman Khila (223266)
Georg Mayer (77476)
Stephen Richards (1495)
Oliver Niehuis (153801)
Bernhard Misof (153798)

January 2019

Statistics on the TE content of arthropod genomes. This tab-separated table lists the genome assembl...

Additional file 4 of Diversity and evolution of the transposable element repertoire in arthropods with particular reference to insects

Malte Petersen (3183417)
David ArmisĂŠn (6001937)
Richard Gibbs (144333)
Lars Hering (110405)
Abderrahman Khila (223266)
Georg Mayer (77476)
Stephen Richards (1495)
Oliver Niehuis (153801)
Bernhard Misof (153798)

January 2019

Genomic datasets. This tab-separated table contains the download URLs for the genome assemblies used...

Data from: Diversity and evolution of the transposable element repertoire in arthropods with particular reference to insects

Petersen, Malte
Armisén, David
Gibbs, Richard
Hering, Lars
Khila, Abderrahman
Mayer, Georg
Richards, Stephen
Niehuis, Oliver
Misof, Bernhard

January 2019

Background: Transposable elements (TEs) are a major component of metazoan genomes and are associated...

Additional file 3 of Diversity and evolution of the transposable element repertoire in arthropods with particular reference to insects

Malte Petersen (3183417)
David ArmisĂŠn (6001937)
Richard Gibbs (144333)
Lars Hering (110405)
Abderrahman Khila (223266)
Georg Mayer (77476)
Stephen Richards (1495)
Oliver Niehuis (153801)
Bernhard Misof (153798)

January 2019

Alu alignments. These plots illustrate that copies of the SINE Alu are present in 56 of the genomes ...

Data from: Diversity and evolution of the transposable element repertoire in arthropods with particular reference to insects

Petersen, Malte
Armisén, David
Gibbs, Richard
Hering, Lars
Khila, Abderrahman
Mayer, Georg
Richards, Stephen
Niehuis, Oliver
Misof, Bernhard

January 2019

Background: Transposable elements (TEs) are a major component of metazoan genomes and are associated...

Data from: Diversity and evolution of the transposable element repertoire in arthropods with particular reference to insects

Petersen, Malte
Armisén, David
Gibbs, Richard
Hering, Lars
Khila, Abderrahman
Mayer, Georg
Richards, Stephen
Niehuis, Oliver
Misof, Bernhard

Background: Transposable elements (TEs) are a major component of metazoan genomes and are associated...

Diversity and evolution of the transposable element repertoire in arthropods with particular reference to insects

Malte Petersen
David Armisén
Richard A. Gibbs
Lars Hering
Abderrahman Khila
Georg Mayer
Stephen Richards
Oliver Niehuis
Bernhard Misof

January 2019

Abstract Background Transposable elements (TEs) are a major component of metazoan genomes and are as...

Diversification of Transposable Elements in Arthropods and Its Impact on Genome Evolution

Changcheng Wu
Jian Lu

May 2019

Transposable elements (TEs) are ubiquitous in arthropods. However, analyses of large-scale and long-...

Additional file 2: of Evolution of Mutator transposable elements across eukaryotic diversity

Mathilde Dupeyron (6497000)
Kumar Singh (6497003)
Chris Bass (77286)
Alexander Hayward (215804)

March 2019

Table S2. Genomic features and characteristics of each Ghost, Spectre and new aphid Phantom elements...

Additional file 1: of Evolution of Mutator transposable elements across eukaryotic diversity

Mathilde Dupeyron (6497000)
Kumar Singh (6497003)
Chris Bass (77286)
Alexander Hayward (215804)

March 2019

Phylogenetic tree of the amino-acid DDE transposase domain of 1631 autonomous Mutator-like elements....

Additional file 1: of Large-scale analysis reveals that the genome features of simple sequence repeats are generally conserved at the family level in insects

Simin Ding (4575376)
Shuping Wang (466892)
Kang He (189002)
Mingxing Jiang (4575379)
Fei Li (143236)

November 2017

Table S1. The genome sizes, GC content, SSR numbers and densities of 136 insect genomes. (DOCX 40 kb

Genome size evolution in the diverse insect order Trichoptera

Heckenhauer, J.
Frandsen, P.B.
Sproul, J.S.
Li, Z.
Paule, J.
Larracuente, A.M.
Maughan, P.J.
Barker, M.S.
Schneider, J.V.
Stewart, R.J.
Pauls, S.U.

January 2022

Background: Genome size is implicated in the form, function, and ecological success of a species. Tw...

Additional file 12: of Large-scale analysis reveals that the genome features of simple sequence repeats are generally conserved at the family level in insects

Simin Ding (4575376)
Shuping Wang (466892)
Kang He (189002)
Mingxing Jiang (4575379)
Fei Li (143236)

November 2017

Figure S4. Phylogenetic analysis of 136 insect genomes using the relative abundance information from...

Evolution of genome content: Population dynamics of transposable elements in flies and humans

González Pérez, Josefa
Petrov, Dmitri A.

March 2015

Book Subtitle: Statistical and Computational MethodsRecent research is starting to shed light on the...

Additional file 1: of Evolutionary transitions in the Asteraceae coincide with marked shifts in transposable element abundance

S. Staton (3566690)
John Burke (578290)

August 2015

Displays the phylogenetic signal for TE superfamilies in the Asteraceae. (PDF 11 kb

Additional file 1 of Diversity and evolution of the transposable element repertoire in arthropods with particular reference to insects

Malte Petersen (3183417)
David ArmisĂŠn (6001937)
Richard Gibbs (144333)
Lars Hering (110405)
Abderrahman Khila (223266)
Georg Mayer (77476)
Stephen Richards (1495)
Oliver Niehuis (153801)
Bernhard Misof (153798)

January 2019

Statistics on the TE content of arthropod genomes. This tab-separated table lists the genome assembl...

Additional file 4 of Diversity and evolution of the transposable element repertoire in arthropods with particular reference to insects

Malte Petersen (3183417)
David ArmisĂŠn (6001937)
Richard Gibbs (144333)
Lars Hering (110405)
Abderrahman Khila (223266)
Georg Mayer (77476)
Stephen Richards (1495)
Oliver Niehuis (153801)
Bernhard Misof (153798)

January 2019

Genomic datasets. This tab-separated table contains the download URLs for the genome assemblies used...

Data from: Diversity and evolution of the transposable element repertoire in arthropods with particular reference to insects

Petersen, Malte
Armisén, David
Gibbs, Richard
Hering, Lars
Khila, Abderrahman
Mayer, Georg
Richards, Stephen
Niehuis, Oliver
Misof, Bernhard

January 2019

Background: Transposable elements (TEs) are a major component of metazoan genomes and are associated...

Additional file 3 of Diversity and evolution of the transposable element repertoire in arthropods with particular reference to insects

Malte Petersen (3183417)
David ArmisĂŠn (6001937)
Richard Gibbs (144333)
Lars Hering (110405)
Abderrahman Khila (223266)
Georg Mayer (77476)
Stephen Richards (1495)
Oliver Niehuis (153801)
Bernhard Misof (153798)

January 2019

Alu alignments. These plots illustrate that copies of the SINE Alu are present in 56 of the genomes ...

Data from: Diversity and evolution of the transposable element repertoire in arthropods with particular reference to insects

Petersen, Malte
Armisén, David
Gibbs, Richard
Hering, Lars
Khila, Abderrahman
Mayer, Georg
Richards, Stephen
Niehuis, Oliver
Misof, Bernhard

January 2019

Background: Transposable elements (TEs) are a major component of metazoan genomes and are associated...

Data from: Diversity and evolution of the transposable element repertoire in arthropods with particular reference to insects

Petersen, Malte
Armisén, David
Gibbs, Richard
Hering, Lars
Khila, Abderrahman
Mayer, Georg
Richards, Stephen
Niehuis, Oliver
Misof, Bernhard

Background: Transposable elements (TEs) are a major component of metazoan genomes and are associated...

Diversity and evolution of the transposable element repertoire in arthropods with particular reference to insects

Malte Petersen
David Armisén
Richard A. Gibbs
Lars Hering
Abderrahman Khila
Georg Mayer
Stephen Richards
Oliver Niehuis
Bernhard Misof

January 2019

Abstract Background Transposable elements (TEs) are a major component of metazoan genomes and are as...

Diversification of Transposable Elements in Arthropods and Its Impact on Genome Evolution

Changcheng Wu
Jian Lu

May 2019

Transposable elements (TEs) are ubiquitous in arthropods. However, analyses of large-scale and long-...

Additional file 2: of Evolution of Mutator transposable elements across eukaryotic diversity

Mathilde Dupeyron (6497000)
Kumar Singh (6497003)
Chris Bass (77286)
Alexander Hayward (215804)

March 2019

Table S2. Genomic features and characteristics of each Ghost, Spectre and new aphid Phantom elements...

Additional file 1: of Evolution of Mutator transposable elements across eukaryotic diversity

Mathilde Dupeyron (6497000)
Kumar Singh (6497003)
Chris Bass (77286)
Alexander Hayward (215804)

March 2019

Phylogenetic tree of the amino-acid DDE transposase domain of 1631 autonomous Mutator-like elements....

Additional file 1: of Large-scale analysis reveals that the genome features of simple sequence repeats are generally conserved at the family level in insects

Simin Ding (4575376)
Shuping Wang (466892)
Kang He (189002)
Mingxing Jiang (4575379)
Fei Li (143236)

November 2017

Table S1. The genome sizes, GC content, SSR numbers and densities of 136 insect genomes. (DOCX 40 kb

Genome size evolution in the diverse insect order Trichoptera

Heckenhauer, J.
Frandsen, P.B.
Sproul, J.S.
Li, Z.
Paule, J.
Larracuente, A.M.
Maughan, P.J.
Barker, M.S.
Schneider, J.V.
Stewart, R.J.
Pauls, S.U.

January 2022

Background: Genome size is implicated in the form, function, and ecological success of a species. Tw...

Additional file 12: of Large-scale analysis reveals that the genome features of simple sequence repeats are generally conserved at the family level in insects

Simin Ding (4575376)
Shuping Wang (466892)
Kang He (189002)
Mingxing Jiang (4575379)
Fei Li (143236)

November 2017

Figure S4. Phylogenetic analysis of 136 insect genomes using the relative abundance information from...

Evolution of genome content: Population dynamics of transposable elements in flies and humans

González Pérez, Josefa
Petrov, Dmitri A.

March 2015

Book Subtitle: Statistical and Computational MethodsRecent research is starting to shed light on the...

Additional file 1: of Evolutionary transitions in the Asteraceae coincide with marked shifts in transposable element abundance

S. Staton (3566690)
John Burke (578290)

August 2015

Displays the phylogenetic signal for TE superfamilies in the Asteraceae. (PDF 11 kb

Additional file 2 of Diversity and evolution of the transposable element repertoire in arthropods with particular reference to insects

Abstract

Extracted data

Additional file 2 of Diversity and evolution of the transposable element repertoire in arthropods with particular reference to insects

Abstract

Extracted data

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