(A) Gene ontology (GO) enrichment analysis of DE lncRNA cis-target genes in tomato F-vs-L. (B) GO enrichment analysis of DE lncRNA cis-target genes in tomato F-vs-R. The y-axis represents the number of DE lncRNA cis-target genes and the x-axis represents the GO functional groups. Red indicates up-regulation of the cis-target gene of lncRNAs and blue indicates down-regulation of the cis-target gene of lncRNAs.</p
Additional file 2: Figure S1. Enrichment analysis of mRNA targets of lncRNAs. (a) GO enrichment anal...
<p>(<b>A</b>) Gene set enrichment analysis in sorghum. Blue and red columns indicate the percentages...
<p>Gene ontology (GO) analysis of 617 genomic regions (826 genes) located nearby differentially expr...
(A) The top 20 pathways associated with the cis target mRNAs of DE lncRNAs in tomato F-vs-L are list...
Gene ontology (GO) classification of differentially expressed genes between normal (N) and stunted (...
A -Based on the expression values of genes annotated to a GO term, GO terms were merged between barl...
Venn diagram showing the number of all (A) and novel (B) lncRNAs expressed tissue-specifically in to...
<p>Horizontal axis in the top displays the percentage of significant genes in each column, while axi...
Genecount–count of genes found for the GO term (identical between root and shoot); Avgr–Average expr...
(A) Histogram showing DE lncRNAs among tissues of tomato. The number of up-regulated (red) and down-...
<p>(A) GO analysis of mRNAs according to biological process. (B) GO analysis of mRNAs according to c...
<p>The GO trees for the molecular function, biological process, and cellular component are shown on ...
(A) Number of transcripts, (B) length of transcripts, (C) number of exons, and (D) length of ORFs. T...
Comparing the GO enrichment analysis of genes regulated by the first layer hidden nodes with differe...
<p>GO analysis provides a controlled vocabulary to describe differentially expressed transcript attr...
Additional file 2: Figure S1. Enrichment analysis of mRNA targets of lncRNAs. (a) GO enrichment anal...
<p>(<b>A</b>) Gene set enrichment analysis in sorghum. Blue and red columns indicate the percentages...
<p>Gene ontology (GO) analysis of 617 genomic regions (826 genes) located nearby differentially expr...
(A) The top 20 pathways associated with the cis target mRNAs of DE lncRNAs in tomato F-vs-L are list...
Gene ontology (GO) classification of differentially expressed genes between normal (N) and stunted (...
A -Based on the expression values of genes annotated to a GO term, GO terms were merged between barl...
Venn diagram showing the number of all (A) and novel (B) lncRNAs expressed tissue-specifically in to...
<p>Horizontal axis in the top displays the percentage of significant genes in each column, while axi...
Genecount–count of genes found for the GO term (identical between root and shoot); Avgr–Average expr...
(A) Histogram showing DE lncRNAs among tissues of tomato. The number of up-regulated (red) and down-...
<p>(A) GO analysis of mRNAs according to biological process. (B) GO analysis of mRNAs according to c...
<p>The GO trees for the molecular function, biological process, and cellular component are shown on ...
(A) Number of transcripts, (B) length of transcripts, (C) number of exons, and (D) length of ORFs. T...
Comparing the GO enrichment analysis of genes regulated by the first layer hidden nodes with differe...
<p>GO analysis provides a controlled vocabulary to describe differentially expressed transcript attr...
Additional file 2: Figure S1. Enrichment analysis of mRNA targets of lncRNAs. (a) GO enrichment anal...
<p>(<b>A</b>) Gene set enrichment analysis in sorghum. Blue and red columns indicate the percentages...
<p>Gene ontology (GO) analysis of 617 genomic regions (826 genes) located nearby differentially expr...