Additional file 1: of Comparative analysis reveals the Genomic Islands in Pasteurella multocida population genetics: on Symbiosis and adaptability

Additional file 1: of Comparative genomic analysis reveals the evolution and environmental adaptation strategies of vibrios

Heyu Lin (3466001)
Min Yu (120607)
Xiaolei Wang (139592)
Xiao-Hua Zhang (87629)

February 2018

Table S1. General features of the 20 complete genomes of Vibrio species analyzed. (DOCX 48Â kb

Additional file 4: of Pan-genomic analysis to redefine species and subspecies based on quantum discontinuous variation: the Klebsiella paradigm

AurĂŠlia Caputo (3566957)
Vicky Merhej (171693)
Kalliopi Georgiades (199075)
Pierre-Edouard Fournier (13453)
Olivier Croce (585362)
Catherine Robert (13458)
Didier Raoult (3833)

September 2015

Table showing 62 genes, annotated by COG, that are only present in Klebsiella pneumoniae subsp. ozae...

Additional file 5: of High genomic variability in the plant pathogenic bacterium Pectobacterium parmentieri deciphered from de novo assembled complete genomes

S. Zoledowska (5863412)
A. Motyka-Pomagruk (5863415)
W. Sledz (5863418)
A. Mengoni (5863421)
E. Lojkowska (5863427)

October 2018

Table S3. The number of CRISPR spacers found per each CRISPR array in the analyzed P. parmentieri st...

Additional file 5: of Comparative analysis reveals the Genomic Islands in Pasteurella multocida population genetics: on Symbiosis and adaptability

Dekang Zhu (3926276)
Jiao He (2926455)
Zhishuang Yang (6245495)
Mingshu Wang (3926270)
Renyong Jia (420073)
Shun Chen (745877)
Mafeng Liu (3926267)
Xinxin Zhao (317779)
Qiao Yang (1506640)
Ying Wu (19057)
Shaqiu Zhang (4392235)
Yunya Liu (1390393)
Ling Zhang (18071)
Yanling Yu (2359852)
Yu You (335606)
Xiaoyue Chen (334717)
Anchun Cheng (420072)

January 2019

Figure S2. The phylogenetic tree of 114 P. multocida based on MLST. (TIF 1599 kb

Comparative analysis reveals the Genomic Islands in Pasteurella multocida population genetics: on Symbiosis and adaptability

Dekang Zhu
Jiao He
Zhishuang Yang
Mingshu Wang
Renyong Jia
Shun Chen
Mafeng Liu
Xinxin Zhao
Qiao Yang
Ying Wu
Shaqiu Zhang
Yunya Liu
Ling Zhang
Yanling Yu
Yu You
Xiaoyue Chen
Anchun Cheng

January 2019

Abstract Background Pasteurella multocida (P. multocida) is a widespread opportunistic pathogen that...

Table_1_Genetic and Phylogenetic Characteristics of Pasteurella multocida Isolates From Different Host Species.XLSX

Zhong Peng (4337941)
Wan Liang (4337938)
Fei Wang (19534)
Zhuofei Xu (38107)
Zhihao Xie (5450666)
Zhenghan Lian (5450669)
Lin Hua (316259)
Rui Zhou (38109)
Huanchun Chen (38125)
Bin Wu (138543)

June 2018

Pasteurella multocida is a leading cause of respiratory diseases in many host species. To underst...

Image_4_Genetic and Phylogenetic Characteristics of Pasteurella multocida Isolates From Different Host Species.PDF

Zhong Peng (4337941)
Wan Liang (4337938)
Fei Wang (19534)
Zhuofei Xu (38107)
Zhihao Xie (5450666)
Zhenghan Lian (5450669)
Lin Hua (316259)
Rui Zhou (38109)
Huanchun Chen (38125)
Bin Wu (138543)

June 2018

Pasteurella multocida is a leading cause of respiratory diseases in many host species. To underst...

Image_1_Genetic and Phylogenetic Characteristics of Pasteurella multocida Isolates From Different Host Species.TIF

Zhong Peng (4337941)
Wan Liang (4337938)
Fei Wang (19534)
Zhuofei Xu (38107)
Zhihao Xie (5450666)
Zhenghan Lian (5450669)
Lin Hua (316259)
Rui Zhou (38109)
Huanchun Chen (38125)
Bin Wu (138543)

June 2018

Pasteurella multocida is a leading cause of respiratory diseases in many host species. To underst...

Image_5_Genetic and Phylogenetic Characteristics of Pasteurella multocida Isolates From Different Host Species.TIF

Zhong Peng (4337941)
Wan Liang (4337938)
Fei Wang (19534)
Zhuofei Xu (38107)
Zhihao Xie (5450666)
Zhenghan Lian (5450669)
Lin Hua (316259)
Rui Zhou (38109)
Huanchun Chen (38125)
Bin Wu (138543)

June 2018

Pasteurella multocida is a leading cause of respiratory diseases in many host species. To underst...

Image_2_Genetic and Phylogenetic Characteristics of Pasteurella multocida Isolates From Different Host Species.TIF

Zhong Peng (4337941)
Wan Liang (4337938)
Fei Wang (19534)
Zhuofei Xu (38107)
Zhihao Xie (5450666)
Zhenghan Lian (5450669)
Lin Hua (316259)
Rui Zhou (38109)
Huanchun Chen (38125)
Bin Wu (138543)

June 2018

Pasteurella multocida is a leading cause of respiratory diseases in many host species. To underst...

Detailed information on Genomic Islands and prophage of each strain.zip

Zhu Dekang (6062971)
He Jiao (6062930)

December 2018

Details of 280 Genomic Islands (GIs) and prophage in 114 strains of Pasteurella multocida were predi...

Additional file 1: Table S1. of OmpA protein sequence-based typing and virulence-associated gene profiles of Pasteurella multocida isolates associated with bovine haemorrhagic septicaemia and porcine pneumonic pasteurellosis in Thailand

Teerasak E-kobon (4371376)
Ratiporn Leeanan (4371382)
Saengtian Pannoi (4371379)
Pornchai Anuntasomboon (4371370)
Pacharee Thongkamkoon (4371373)
Arinthip Thamchaipenet (2206363)

August 2017

Clustering summary of 186 bovine and porcine isolates of P. multocida collected from Thailand and 41...

Genomic diversity and molecular epidemiology of Pasteurella multocida.

Emily Smith
Elizabeth Miller
Jeannette Munoz Aguayo
Cristian Flores Figueroa
Jill Nezworski
Marissa Studniski
Ben Wileman
Timothy Johnson

January 2021

Pasteurella multocida is a bacterial pathogen with the ability to infect a multitude of hosts includ...

Additional file 1: Table S1. of Genetic diversity in the plasticity zone and the presence of the chlamydial plasmid differentiates Chlamydia pecorum strains from pigs, sheep, cattle, and koalas

Martina Jelocnik (3581909)
Nathan Bachmann (198737)
Bernhard Kaltenboeck (288473)
Courtney Waugh (845322)
Lucy Woolford (3581903)
K. Speight (3581906)
Amber Gillett (3098235)
Damien Higgins (767278)
Cheyne Flanagan (3581900)
Garry Myers (377052)
Peter Timms (206543)
Adam Polkinghorne (81145)

November 2015

C. pecorum L1 plasmid sequence identity comparisons based on discontiguous megaBLAST hits. (PDF 338Â...

Supplementary Tables: Genome organization and copy-number variation reveal clues to virulence evolution in Coccidioides posadasii

Claire Dubin (7609637)
Mark Voorhies (435858)
Anita Sil (89454)
Marcus M. Teixeira (467709)
Bridget Barker (13876851)
Rachel Brem (8730671)

September 2022

Table S1. Each row reports the results of analyses of single nucleotide variation in the indicated g...

Additional file 1: of Comparative genomic analysis reveals the evolution and environmental adaptation strategies of vibrios

Heyu Lin (3466001)
Min Yu (120607)
Xiaolei Wang (139592)
Xiao-Hua Zhang (87629)

February 2018

Table S1. General features of the 20 complete genomes of Vibrio species analyzed. (DOCX 48Â kb

Additional file 4: of Pan-genomic analysis to redefine species and subspecies based on quantum discontinuous variation: the Klebsiella paradigm

AurĂŠlia Caputo (3566957)
Vicky Merhej (171693)
Kalliopi Georgiades (199075)
Pierre-Edouard Fournier (13453)
Olivier Croce (585362)
Catherine Robert (13458)
Didier Raoult (3833)

September 2015

Table showing 62 genes, annotated by COG, that are only present in Klebsiella pneumoniae subsp. ozae...

Additional file 5: of High genomic variability in the plant pathogenic bacterium Pectobacterium parmentieri deciphered from de novo assembled complete genomes

S. Zoledowska (5863412)
A. Motyka-Pomagruk (5863415)
W. Sledz (5863418)
A. Mengoni (5863421)
E. Lojkowska (5863427)

October 2018

Table S3. The number of CRISPR spacers found per each CRISPR array in the analyzed P. parmentieri st...

Additional file 5: of Comparative analysis reveals the Genomic Islands in Pasteurella multocida population genetics: on Symbiosis and adaptability

Dekang Zhu (3926276)
Jiao He (2926455)
Zhishuang Yang (6245495)
Mingshu Wang (3926270)
Renyong Jia (420073)
Shun Chen (745877)
Mafeng Liu (3926267)
Xinxin Zhao (317779)
Qiao Yang (1506640)
Ying Wu (19057)
Shaqiu Zhang (4392235)
Yunya Liu (1390393)
Ling Zhang (18071)
Yanling Yu (2359852)
Yu You (335606)
Xiaoyue Chen (334717)
Anchun Cheng (420072)

January 2019

Figure S2. The phylogenetic tree of 114 P. multocida based on MLST. (TIF 1599 kb

Comparative analysis reveals the Genomic Islands in Pasteurella multocida population genetics: on Symbiosis and adaptability

Dekang Zhu
Jiao He
Zhishuang Yang
Mingshu Wang
Renyong Jia
Shun Chen
Mafeng Liu
Xinxin Zhao
Qiao Yang
Ying Wu
Shaqiu Zhang
Yunya Liu
Ling Zhang
Yanling Yu
Yu You
Xiaoyue Chen
Anchun Cheng

January 2019

Abstract Background Pasteurella multocida (P. multocida) is a widespread opportunistic pathogen that...

Table_1_Genetic and Phylogenetic Characteristics of Pasteurella multocida Isolates From Different Host Species.XLSX

Zhong Peng (4337941)
Wan Liang (4337938)
Fei Wang (19534)
Zhuofei Xu (38107)
Zhihao Xie (5450666)
Zhenghan Lian (5450669)
Lin Hua (316259)
Rui Zhou (38109)
Huanchun Chen (38125)
Bin Wu (138543)

June 2018

Pasteurella multocida is a leading cause of respiratory diseases in many host species. To underst...

Image_4_Genetic and Phylogenetic Characteristics of Pasteurella multocida Isolates From Different Host Species.PDF

Zhong Peng (4337941)
Wan Liang (4337938)
Fei Wang (19534)
Zhuofei Xu (38107)
Zhihao Xie (5450666)
Zhenghan Lian (5450669)
Lin Hua (316259)
Rui Zhou (38109)
Huanchun Chen (38125)
Bin Wu (138543)

June 2018

Pasteurella multocida is a leading cause of respiratory diseases in many host species. To underst...

Image_1_Genetic and Phylogenetic Characteristics of Pasteurella multocida Isolates From Different Host Species.TIF

Zhong Peng (4337941)
Wan Liang (4337938)
Fei Wang (19534)
Zhuofei Xu (38107)
Zhihao Xie (5450666)
Zhenghan Lian (5450669)
Lin Hua (316259)
Rui Zhou (38109)
Huanchun Chen (38125)
Bin Wu (138543)

June 2018

Pasteurella multocida is a leading cause of respiratory diseases in many host species. To underst...

Image_5_Genetic and Phylogenetic Characteristics of Pasteurella multocida Isolates From Different Host Species.TIF

Zhong Peng (4337941)
Wan Liang (4337938)
Fei Wang (19534)
Zhuofei Xu (38107)
Zhihao Xie (5450666)
Zhenghan Lian (5450669)
Lin Hua (316259)
Rui Zhou (38109)
Huanchun Chen (38125)
Bin Wu (138543)

June 2018

Pasteurella multocida is a leading cause of respiratory diseases in many host species. To underst...

Image_2_Genetic and Phylogenetic Characteristics of Pasteurella multocida Isolates From Different Host Species.TIF

Zhong Peng (4337941)
Wan Liang (4337938)
Fei Wang (19534)
Zhuofei Xu (38107)
Zhihao Xie (5450666)
Zhenghan Lian (5450669)
Lin Hua (316259)
Rui Zhou (38109)
Huanchun Chen (38125)
Bin Wu (138543)

June 2018

Pasteurella multocida is a leading cause of respiratory diseases in many host species. To underst...

Detailed information on Genomic Islands and prophage of each strain.zip

Zhu Dekang (6062971)
He Jiao (6062930)

December 2018

Details of 280 Genomic Islands (GIs) and prophage in 114 strains of Pasteurella multocida were predi...

Additional file 1: Table S1. of OmpA protein sequence-based typing and virulence-associated gene profiles of Pasteurella multocida isolates associated with bovine haemorrhagic septicaemia and porcine pneumonic pasteurellosis in Thailand

Teerasak E-kobon (4371376)
Ratiporn Leeanan (4371382)
Saengtian Pannoi (4371379)
Pornchai Anuntasomboon (4371370)
Pacharee Thongkamkoon (4371373)
Arinthip Thamchaipenet (2206363)

August 2017

Clustering summary of 186 bovine and porcine isolates of P. multocida collected from Thailand and 41...

Genomic diversity and molecular epidemiology of Pasteurella multocida.

Emily Smith
Elizabeth Miller
Jeannette Munoz Aguayo
Cristian Flores Figueroa
Jill Nezworski
Marissa Studniski
Ben Wileman
Timothy Johnson

January 2021

Pasteurella multocida is a bacterial pathogen with the ability to infect a multitude of hosts includ...

Additional file 1: Table S1. of Genetic diversity in the plasticity zone and the presence of the chlamydial plasmid differentiates Chlamydia pecorum strains from pigs, sheep, cattle, and koalas

Martina Jelocnik (3581909)
Nathan Bachmann (198737)
Bernhard Kaltenboeck (288473)
Courtney Waugh (845322)
Lucy Woolford (3581903)
K. Speight (3581906)
Amber Gillett (3098235)
Damien Higgins (767278)
Cheyne Flanagan (3581900)
Garry Myers (377052)
Peter Timms (206543)
Adam Polkinghorne (81145)

November 2015

C. pecorum L1 plasmid sequence identity comparisons based on discontiguous megaBLAST hits. (PDF 338Â...

Supplementary Tables: Genome organization and copy-number variation reveal clues to virulence evolution in Coccidioides posadasii

Claire Dubin (7609637)
Mark Voorhies (435858)
Anita Sil (89454)
Marcus M. Teixeira (467709)
Bridget Barker (13876851)
Rachel Brem (8730671)

September 2022

Table S1. Each row reports the results of analyses of single nucleotide variation in the indicated g...

Additional file 1: of Comparative genomic analysis reveals the evolution and environmental adaptation strategies of vibrios

Heyu Lin (3466001)
Min Yu (120607)
Xiaolei Wang (139592)
Xiao-Hua Zhang (87629)

February 2018

Table S1. General features of the 20 complete genomes of Vibrio species analyzed. (DOCX 48Â kb

Additional file 4: of Pan-genomic analysis to redefine species and subspecies based on quantum discontinuous variation: the Klebsiella paradigm

AurĂŠlia Caputo (3566957)
Vicky Merhej (171693)
Kalliopi Georgiades (199075)
Pierre-Edouard Fournier (13453)
Olivier Croce (585362)
Catherine Robert (13458)
Didier Raoult (3833)

September 2015

Table showing 62 genes, annotated by COG, that are only present in Klebsiella pneumoniae subsp. ozae...

Additional file 5: of High genomic variability in the plant pathogenic bacterium Pectobacterium parmentieri deciphered from de novo assembled complete genomes

S. Zoledowska (5863412)
A. Motyka-Pomagruk (5863415)
W. Sledz (5863418)
A. Mengoni (5863421)
E. Lojkowska (5863427)

October 2018

Table S3. The number of CRISPR spacers found per each CRISPR array in the analyzed P. parmentieri st...

Additional file 1: of Comparative analysis reveals the Genomic Islands in Pasteurella multocida population genetics: on Symbiosis and adaptability

Abstract

Extracted data

Additional file 1: of Comparative analysis reveals the Genomic Islands in Pasteurella multocida population genetics: on Symbiosis and adaptability

Abstract

Extracted data

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