Additional file 1: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology

Additional file 2: of Hints on T cell responses in a fish-parasite model: Enteromyxum leei induces differential expression of T cell signature molecules depending on the organ and the infection status

M. Carla Piazzon (5576864)
Itziar Estensoro (421070)
Josep Calduch-Giner (4230838)
Raquel del Pozo (5576867)
Amparo Picard-Sánchez (5576870)
Jaume Pérez-Sánchez (421069)
Ariadna Sitjà-Bobadilla (421074)

July 2018

Table S2. Gene expression data relative to β-actin for each individual control (CTRL) and recipient ...

Additional file 1: of Oral administration of antibiotics increased the potential mobility of bacterial resistance genes in the gut of the fish Piaractus mesopotamicus

Johan Sáenz (6371654)
Tamires Marques (6371645)
Rafael Barone (6371648)
José Cyrino (6371657)
Susanne Kublik (843462)
Joseph Nesme (5067305)
Michael Schloter (140906)
Susanne Rath (5869301)
Gisle Vestergaard (128321)

February 2019

Figure S1. Variation of weight of the sampled fish before, during and after exposure to florfenicol....

Additional file 2: Figure S2. of Infection of zebrafish embryos with live fluorescent Streptococcus pneumoniae as a real-time pneumococcal meningitis model

Kin Jim (3424520)
JooYeon Engelen-Lee (3416978)
Astrid van der Sar (260279)
Wilbert Bitter (185600)
Matthijs Brouwer (3416969)
Arie van der Ende (14875)
Jan-Willem Veening (366289)
Diederik van de Beek (116723)
Christina Vandenbroucke-Grauls (733795)

August 2016

Macrophages are involved in the clearance of pneumolysin-deficient pneumococci (D39Δply) in zebrafis...

Additional file 8: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology

Christopher Gaulke (6262133)
Mauricio Martins (6262136)
Virginia Watral (462334)
Ian Humphreys (6262139)
Sean Spagnoli (4903969)
Michael Kent (849960)
Thomas Sharpton (6262145)

January 2019

Figure S4. Parasite exposure associated with decrease in weight and condition factor if zebrafish. A...

Additional file 5: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology

Christopher Gaulke (6262133)
Mauricio Martins (6262136)
Virginia Watral (462334)
Ian Humphreys (6262139)
Sean Spagnoli (4903969)
Michael Kent (849960)
Thomas Sharpton (6262145)

January 2019

Figure S2. Parasite burden across time. A) A histogram of total worm burden in exposed fish. B) Tota...

Additional file 11: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology

Christopher Gaulke (6262133)
Mauricio Martins (6262136)
Virginia Watral (462334)
Ian Humphreys (6262139)
Sean Spagnoli (4903969)
Michael Kent (849960)
Thomas Sharpton (6262145)

January 2019

Figure S5. Temporal variation in microbiome diversity in exposed and unexposed fish. Nonmetric multi...

Additional file 7: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiome’s link to Pseudocapillaria tomentosa infection and pathology

Christopher Gaulke (6262133)
Mauricio Martins (6262136)
Virginia Watral (462334)
Ian Humphreys (6262139)
Sean Spagnoli (4903969)
Michael Kent (849960)
Thomas Sharpton (6262145)

January 2019

Figure S3. Microscopic examination of P. tomentosa infected intestines. Wet mounts (A-C) of and hist...

Additional file 17: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology

Christopher Gaulke (6262133)
Mauricio Martins (6262136)
Virginia Watral (462334)
Ian Humphreys (6262139)
Sean Spagnoli (4903969)
Michael Kent (849960)
Thomas Sharpton (6262145)

January 2019

Figure S8. Random forest variable importance. A variable importance plot for the top 15 most importa...

Additional file 15: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology

Christopher Gaulke (6262133)
Mauricio Martins (6262136)
Virginia Watral (462334)
Ian Humphreys (6262139)
Sean Spagnoli (4903969)
Michael Kent (849960)
Thomas Sharpton (6262145)

January 2019

Figure S7. Mycoplasma sequence variant abundance is elevated in exposed animals. Boxplots of A) Myco...

A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiome’s link to Pseudocapillaria tomentosa infection and pathology

Christopher A. Gaulke
Mauricio L. Martins
Virginia G. Watral
Ian R. Humphreys
Sean T. Spagnoli
Michael L. Kent
Thomas J. Sharpton

January 2019

Abstract Background Helminth parasites represent a significant threat to the health of human and ani...

Additional file 14: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology

Christopher Gaulke (6262133)
Mauricio Martins (6262136)
Virginia Watral (462334)
Ian Humphreys (6262139)
Sean Spagnoli (4903969)
Michael Kent (849960)
Thomas Sharpton (6262145)

January 2019

Figure S6. Mycoplasma spp. sequence variants are closely related to sequence variants associated wit...

Additional file 1: Figure S1. of Infection of zebrafish embryos with live fluorescent Streptococcus pneumoniae as a real-time pneumococcal meningitis model

Kin Jim (3424520)
JooYeon Engelen-Lee (3416978)
Astrid van der Sar (260279)
Wilbert Bitter (185600)
Matthijs Brouwer (3416969)
Arie van der Ende (14875)
Jan-Willem Veening (366289)
Diederik van de Beek (116723)
Christina Vandenbroucke-Grauls (733795)

August 2016

Infection with green fluorescent wild-type HlpA-GFP Streptococcus pneumoniae D39 via the hindbrain v...

Reviewing Pseudoloma neurophilia infections in the popular zebrafish model

Caballero-Huertas, Marta
Soto, Manu
Ribas, Laia

September 2021

12 pages, 2 figures, 1 table.-- Data Availability Statement: Data openly available in a public repos...

Additional file 1: of Biodiversity and host-parasite cophylogeny of Sphaerospora (sensu stricto) (Cnidaria: Myxozoa)

Sneha Patra (5396219)
Pavla Bartošová-Sojková (544270)
Hana Pecková (3501839)
Ivan Fiala (223529)
Edit Eszterbauer (5396216)
Astrid Holzer (3501845)

June 2018

Table S1. List of fish hosts examined for Sphaerospora spp. infections with information about locali...

Table_1_Acute immune responses in zebrafish and evasive behavior of a parasite – who is winning?.docx

Heidi Mathiessen (9924729)
Sebastian Kjeldgaard-Nintemann (16493565)
Carlota Marola Fernandez Gonzalez (16493568)
Cyril Henard (16493571)
Julie Algreen Reimer (16493574)
Sara Vebæk Gelskov (16493577)
Moonika Haahr Marana (3737656)
Louise von Gersdorff Jørgensen (299821)

July 2023

The protozoan parasite Ichthyophthirius multifiliis is an economically important parasite for the aq...

Additional file 2: of Hints on T cell responses in a fish-parasite model: Enteromyxum leei induces differential expression of T cell signature molecules depending on the organ and the infection status

M. Carla Piazzon (5576864)
Itziar Estensoro (421070)
Josep Calduch-Giner (4230838)
Raquel del Pozo (5576867)
Amparo Picard-Sánchez (5576870)
Jaume Pérez-Sánchez (421069)
Ariadna Sitjà-Bobadilla (421074)

July 2018

Table S2. Gene expression data relative to β-actin for each individual control (CTRL) and recipient ...

Additional file 1: of Oral administration of antibiotics increased the potential mobility of bacterial resistance genes in the gut of the fish Piaractus mesopotamicus

Johan Sáenz (6371654)
Tamires Marques (6371645)
Rafael Barone (6371648)
José Cyrino (6371657)
Susanne Kublik (843462)
Joseph Nesme (5067305)
Michael Schloter (140906)
Susanne Rath (5869301)
Gisle Vestergaard (128321)

February 2019

Figure S1. Variation of weight of the sampled fish before, during and after exposure to florfenicol....

Additional file 2: Figure S2. of Infection of zebrafish embryos with live fluorescent Streptococcus pneumoniae as a real-time pneumococcal meningitis model

Kin Jim (3424520)
JooYeon Engelen-Lee (3416978)
Astrid van der Sar (260279)
Wilbert Bitter (185600)
Matthijs Brouwer (3416969)
Arie van der Ende (14875)
Jan-Willem Veening (366289)
Diederik van de Beek (116723)
Christina Vandenbroucke-Grauls (733795)

August 2016

Macrophages are involved in the clearance of pneumolysin-deficient pneumococci (D39Δply) in zebrafis...

Additional file 8: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology

Christopher Gaulke (6262133)
Mauricio Martins (6262136)
Virginia Watral (462334)
Ian Humphreys (6262139)
Sean Spagnoli (4903969)
Michael Kent (849960)
Thomas Sharpton (6262145)

January 2019

Figure S4. Parasite exposure associated with decrease in weight and condition factor if zebrafish. A...

Additional file 5: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology

Christopher Gaulke (6262133)
Mauricio Martins (6262136)
Virginia Watral (462334)
Ian Humphreys (6262139)
Sean Spagnoli (4903969)
Michael Kent (849960)
Thomas Sharpton (6262145)

January 2019

Figure S2. Parasite burden across time. A) A histogram of total worm burden in exposed fish. B) Tota...

Additional file 11: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology

Christopher Gaulke (6262133)
Mauricio Martins (6262136)
Virginia Watral (462334)
Ian Humphreys (6262139)
Sean Spagnoli (4903969)
Michael Kent (849960)
Thomas Sharpton (6262145)

January 2019

Figure S5. Temporal variation in microbiome diversity in exposed and unexposed fish. Nonmetric multi...

Additional file 7: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiome’s link to Pseudocapillaria tomentosa infection and pathology

Christopher Gaulke (6262133)
Mauricio Martins (6262136)
Virginia Watral (462334)
Ian Humphreys (6262139)
Sean Spagnoli (4903969)
Michael Kent (849960)
Thomas Sharpton (6262145)

January 2019

Figure S3. Microscopic examination of P. tomentosa infected intestines. Wet mounts (A-C) of and hist...

Additional file 17: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology

Christopher Gaulke (6262133)
Mauricio Martins (6262136)
Virginia Watral (462334)
Ian Humphreys (6262139)
Sean Spagnoli (4903969)
Michael Kent (849960)
Thomas Sharpton (6262145)

January 2019

Figure S8. Random forest variable importance. A variable importance plot for the top 15 most importa...

Additional file 15: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology

Christopher Gaulke (6262133)
Mauricio Martins (6262136)
Virginia Watral (462334)
Ian Humphreys (6262139)
Sean Spagnoli (4903969)
Michael Kent (849960)
Thomas Sharpton (6262145)

January 2019

Figure S7. Mycoplasma sequence variant abundance is elevated in exposed animals. Boxplots of A) Myco...

A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiome’s link to Pseudocapillaria tomentosa infection and pathology

Christopher A. Gaulke
Mauricio L. Martins
Virginia G. Watral
Ian R. Humphreys
Sean T. Spagnoli
Michael L. Kent
Thomas J. Sharpton

January 2019

Abstract Background Helminth parasites represent a significant threat to the health of human and ani...

Additional file 14: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology

Christopher Gaulke (6262133)
Mauricio Martins (6262136)
Virginia Watral (462334)
Ian Humphreys (6262139)
Sean Spagnoli (4903969)
Michael Kent (849960)
Thomas Sharpton (6262145)

January 2019

Figure S6. Mycoplasma spp. sequence variants are closely related to sequence variants associated wit...

Additional file 1: Figure S1. of Infection of zebrafish embryos with live fluorescent Streptococcus pneumoniae as a real-time pneumococcal meningitis model

Kin Jim (3424520)
JooYeon Engelen-Lee (3416978)
Astrid van der Sar (260279)
Wilbert Bitter (185600)
Matthijs Brouwer (3416969)
Arie van der Ende (14875)
Jan-Willem Veening (366289)
Diederik van de Beek (116723)
Christina Vandenbroucke-Grauls (733795)

August 2016

Infection with green fluorescent wild-type HlpA-GFP Streptococcus pneumoniae D39 via the hindbrain v...

Reviewing Pseudoloma neurophilia infections in the popular zebrafish model

Caballero-Huertas, Marta
Soto, Manu
Ribas, Laia

September 2021

12 pages, 2 figures, 1 table.-- Data Availability Statement: Data openly available in a public repos...

Additional file 1: of Biodiversity and host-parasite cophylogeny of Sphaerospora (sensu stricto) (Cnidaria: Myxozoa)

Sneha Patra (5396219)
Pavla Bartošová-Sojková (544270)
Hana Pecková (3501839)
Ivan Fiala (223529)
Edit Eszterbauer (5396216)
Astrid Holzer (3501845)

June 2018

Table S1. List of fish hosts examined for Sphaerospora spp. infections with information about locali...

Table_1_Acute immune responses in zebrafish and evasive behavior of a parasite – who is winning?.docx

Heidi Mathiessen (9924729)
Sebastian Kjeldgaard-Nintemann (16493565)
Carlota Marola Fernandez Gonzalez (16493568)
Cyril Henard (16493571)
Julie Algreen Reimer (16493574)
Sara Vebæk Gelskov (16493577)
Moonika Haahr Marana (3737656)
Louise von Gersdorff Jørgensen (299821)

July 2023

The protozoan parasite Ichthyophthirius multifiliis is an economically important parasite for the aq...

Additional file 2: of Hints on T cell responses in a fish-parasite model: Enteromyxum leei induces differential expression of T cell signature molecules depending on the organ and the infection status

M. Carla Piazzon (5576864)
Itziar Estensoro (421070)
Josep Calduch-Giner (4230838)
Raquel del Pozo (5576867)
Amparo Picard-Sánchez (5576870)
Jaume Pérez-Sánchez (421069)
Ariadna Sitjà-Bobadilla (421074)

July 2018

Table S2. Gene expression data relative to β-actin for each individual control (CTRL) and recipient ...

Additional file 1: of Oral administration of antibiotics increased the potential mobility of bacterial resistance genes in the gut of the fish Piaractus mesopotamicus

Johan Sáenz (6371654)
Tamires Marques (6371645)
Rafael Barone (6371648)
José Cyrino (6371657)
Susanne Kublik (843462)
Joseph Nesme (5067305)
Michael Schloter (140906)
Susanne Rath (5869301)
Gisle Vestergaard (128321)

February 2019

Figure S1. Variation of weight of the sampled fish before, during and after exposure to florfenicol....

Additional file 2: Figure S2. of Infection of zebrafish embryos with live fluorescent Streptococcus pneumoniae as a real-time pneumococcal meningitis model

Kin Jim (3424520)
JooYeon Engelen-Lee (3416978)
Astrid van der Sar (260279)
Wilbert Bitter (185600)
Matthijs Brouwer (3416969)
Arie van der Ende (14875)
Jan-Willem Veening (366289)
Diederik van de Beek (116723)
Christina Vandenbroucke-Grauls (733795)

August 2016

Macrophages are involved in the clearance of pneumolysin-deficient pneumococci (D39Δply) in zebrafis...

Additional file 1: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology

Abstract

Extracted data

Additional file 1: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology

Abstract

Extracted data

Related items

Related items

Additional file 1: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology

Abstract

Extracted data

Additional file 1: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology

Abstract

Extracted data

Related items

Related items

Additional file 1: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology

Additional file 1: of A longitudinal assessment of host-microbe-parasite interactions resolves the zebrafish gut microbiomeâs link to Pseudocapillaria tomentosa infection and pathology