output from https://github.com/KyleTDavid/NGS/blob/master/get_data.sh with the 56 entries that contain an unexpected number of columns (either due to pooled samples or formatting errors) removed. This is the original input for https://github.com/KyleTDavid/NGS/blob/master/get_plots.
<p>PCA score plot (A) and loading plot (B) of 27 batches of CBAT samples on the basis of the content...
Sequencing reads after filtering and BWA alignments in SAM format and raw SNP reports in VCF and BCF...
Table S1. Details of the 33 datasets downloaded from SRA. The “Number of Sequencing Runs” gives the ...
The postdemultiplexing quality filtered data (i.e. output of "Demultiplexing and dropbase" of this r...
<p>Raw and filtered read counts from sequencing <i>C</i>. <i>sativa</i> sRNAs.</p
<p>The number and percentage (in parentheses) of the sequences removed for redundant (column 2) and ...
PCA score plot of samples from control and transgenic lines. Each with triplicate samples taken for ...
Query strains that express one effector were mated to an array of ~330 effectors in groups of ~10 qu...
<p>Histograms of the regression coefficient versus the density of proteins, comparing no filter (A),...
ABC dataset was obtained from these files by subsampling random gene copy per population. Archive co...
Query strains that express one effector were mated to an array of ~330 effectors in groups of ~10 qu...
Query strains that express one effector were mated to an array of ~330 effectors in groups of ~10 qu...
Table S3. The list of the 2000 SRA RNA-seq samples used in the analysis. SRA samples were randomly s...
This text tabulated file contains all the filtered sequences amplified with the ITS1-F and ITS1Poa-R...
Sequencing-based analyses of low-biomass samples are known to be prone to misinterpretation due to t...
<p>PCA score plot (A) and loading plot (B) of 27 batches of CBAT samples on the basis of the content...
Sequencing reads after filtering and BWA alignments in SAM format and raw SNP reports in VCF and BCF...
Table S1. Details of the 33 datasets downloaded from SRA. The “Number of Sequencing Runs” gives the ...
The postdemultiplexing quality filtered data (i.e. output of "Demultiplexing and dropbase" of this r...
<p>Raw and filtered read counts from sequencing <i>C</i>. <i>sativa</i> sRNAs.</p
<p>The number and percentage (in parentheses) of the sequences removed for redundant (column 2) and ...
PCA score plot of samples from control and transgenic lines. Each with triplicate samples taken for ...
Query strains that express one effector were mated to an array of ~330 effectors in groups of ~10 qu...
<p>Histograms of the regression coefficient versus the density of proteins, comparing no filter (A),...
ABC dataset was obtained from these files by subsampling random gene copy per population. Archive co...
Query strains that express one effector were mated to an array of ~330 effectors in groups of ~10 qu...
Query strains that express one effector were mated to an array of ~330 effectors in groups of ~10 qu...
Table S3. The list of the 2000 SRA RNA-seq samples used in the analysis. SRA samples were randomly s...
This text tabulated file contains all the filtered sequences amplified with the ITS1-F and ITS1Poa-R...
Sequencing-based analyses of low-biomass samples are known to be prone to misinterpretation due to t...
<p>PCA score plot (A) and loading plot (B) of 27 batches of CBAT samples on the basis of the content...
Sequencing reads after filtering and BWA alignments in SAM format and raw SNP reports in VCF and BCF...
Table S1. Details of the 33 datasets downloaded from SRA. The “Number of Sequencing Runs” gives the ...
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