Additional file 6: of Comparison of splenocyte microRNA expression profiles of pigs during acute and chronic toxoplasmosis

Additional file 6: of Identification of microRNAs regulating Escherichia coli F18 infection in Meishan weaned piglets

Zhengchang Wu (140532)
Weiyun Qin (3445175)
Seng Wu (3445172)
Guoqiang Zhu (140542)
Wenbin Bao (140546)
Shenglong Wu (140544)

November 2016

Gene ontology classification annotated by DAVID for potential target genes of differentially express...

Additional file 1: of Differentially expressed non-coding RNAs induced by transmissible gastroenteritis virus potentially regulate inflammation and NF-ÎşB pathway in porcine intestinal epithelial cell line

Xuelian Ma (5852510)
Xiaomin Zhao (566041)
Zhichao Zhang (530603)
Jianxiong Guo (4571830)
Lijuan Guan (3740323)
Juejun Li (5852513)
Mi Mi (5852516)
Yong Huang (15745)
Dewen Tong (93139)

October 2018

Table S1. The detailed information of differentially expressed mRNAs. Table S2. The detailed informa...

Additional file 5: of Deciphering transcriptome profiles of peripheral blood mononuclear cells in response to PRRSV vaccination in pigs

Md Islam (257385)
Christine Große-Brinkhaus (412998)
Maren Pröll (707145)
Muhammad Uddin (3439820)
Sharmin Rony (3439817)
Dawit Tesfaye (79384)
Ernst Tholen (79379)
Michael Hölker (79376)
Karl Schellander (79383)
Christiane Neuhoff (412997)

August 2016

List of DEGs in PBMCs of pigs at 72 hpv of PRRSV vaccination in pigs compared to control. (XLSX 41 k...

Additional file 7: of Comparison of splenocyte microRNA expression profiles of pigs during acute and chronic toxoplasmosis

Zhaofeng Hou (4371754)
Dandan Liu (303719)
Shijie Su (4371757)
Lele Wang (542468)
Zhenxing Zhao (6279890)
Yifei Ma (206062)
Qiaoqiao Li (355362)
Chuanli Jia (4371751)
Jinjun Xu (777049)
Yonghua Zhou (151227)
Jianping Tao (124288)

January 2019

Table S6. DEMs induced by T. gondii at 10, 25 and 50 DPI regulating the gene expression in Hematopoi...

Additional file 10: of Comparison of splenocyte microRNA expression profiles of pigs during acute and chronic toxoplasmosis

Zhaofeng Hou (4371754)
Dandan Liu (303719)
Shijie Su (4371757)
Lele Wang (542468)
Zhenxing Zhao (6279890)
Yifei Ma (206062)
Qiaoqiao Li (355362)
Chuanli Jia (4371751)
Jinjun Xu (777049)
Yonghua Zhou (151227)
Jianping Tao (124288)

January 2019

Figure S3. Target genes of DEMs between SI-50 and SC-50 samples enriched in BCR signaling pathway. (...

Additional file 5: of Comparison of splenocyte microRNA expression profiles of pigs during acute and chronic toxoplasmosis

Zhaofeng Hou (4371754)
Dandan Liu (303719)
Shijie Su (4371757)
Lele Wang (542468)
Zhenxing Zhao (6279890)
Yifei Ma (206062)
Qiaoqiao Li (355362)
Chuanli Jia (4371751)
Jinjun Xu (777049)
Yonghua Zhou (151227)
Jianping Tao (124288)

January 2019

Table S5. KEGG pathways of target genes of DEMs between the infected and control groups at 10, 25 an...

Additional file 8: of Comparison of splenocyte microRNA expression profiles of pigs during acute and chronic toxoplasmosis

Zhaofeng Hou (4371754)
Dandan Liu (303719)
Shijie Su (4371757)
Lele Wang (542468)
Zhenxing Zhao (6279890)
Yifei Ma (206062)
Qiaoqiao Li (355362)
Chuanli Jia (4371751)
Jinjun Xu (777049)
Yonghua Zhou (151227)
Jianping Tao (124288)

January 2019

Figure S2. Target genes of DEMs between SI-50 and SC-50 samples enriched in Chagas disease pathway. ...

Additional file 11: of Comparison of splenocyte microRNA expression profiles of pigs during acute and chronic toxoplasmosis

Zhaofeng Hou (4371754)
Dandan Liu (303719)
Shijie Su (4371757)
Lele Wang (542468)
Zhenxing Zhao (6279890)
Yifei Ma (206062)
Qiaoqiao Li (355362)
Chuanli Jia (4371751)
Jinjun Xu (777049)
Yonghua Zhou (151227)
Jianping Tao (124288)

January 2019

Table S8. DEMs induced by T. gondii at 50 DPI regulating the gene expression in BCR signaling pathwa...

Additional file 9: of Comparison of splenocyte microRNA expression profiles of pigs during acute and chronic toxoplasmosis

Zhaofeng Hou (4371754)
Dandan Liu (303719)
Shijie Su (4371757)
Lele Wang (542468)
Zhenxing Zhao (6279890)
Yifei Ma (206062)
Qiaoqiao Li (355362)
Chuanli Jia (4371751)
Jinjun Xu (777049)
Yonghua Zhou (151227)
Jianping Tao (124288)

January 2019

Table S7. DEMs induced by T. gondii at 50 DPI regulating the gene expression in Chagas disease pathw...

Additional file 6: Figure S1. of Microarray analysis of long non-coding RNA expression profiles uncovers a Toxoplasma-induced negative regulation of host immune signaling

Wenquan Liu (3755473)
Liyang Huang (3755479)
Qimei Wei (3755467)
Yu Zhang (12946)
Shengnan Zhang (1340988)
Wenting Zhang (342162)
Liya Cai (3755476)
Shaohui Liang (1710667)

March 2018

The additional interaction network of lncRNAs and immune-related genes induced by T. gondii infectio...

Additional file 6: of Dissecting clinical outcome of porcine circovirus type 2 with in vivo derived transcriptomic signatures of host tissue responses

Nicolaas Van Renne (4967131)
Ruifang Wei (4625599)
Nathalie Pochet (150518)
Hans Nauwynck (533091)

November 2018

PorSignDB performance in lymph nodes of PMWS pigs VS healthy pigs. Figure displays enriched PorSignD...

Additional file 2: Table S2. of Microarray analysis of long non-coding RNA expression profiles uncovers a Toxoplasma-induced negative regulation of host immune signaling

Wenquan Liu (3755473)
Liyang Huang (3755479)
Qimei Wei (3755467)
Yu Zhang (12946)
Shengnan Zhang (1340988)
Wenting Zhang (342162)
Liya Cai (3755476)
Shaohui Liang (1710667)

March 2018

A list of significantly differentially expressed lncRNAs between the T. gondii infected and uninfect...

Additional file 4: Table S4. of Microarray analysis of long non-coding RNA expression profiles uncovers a Toxoplasma-induced negative regulation of host immune signaling

Wenquan Liu (3755473)
Liyang Huang (3755479)
Qimei Wei (3755467)
Yu Zhang (12946)
Shengnan Zhang (1340988)
Wenting Zhang (342162)
Liya Cai (3755476)
Shaohui Liang (1710667)

March 2018

A list of significantly differentially expressed mRNAs between the T. gondii infected and uninfected...

Additional file 8: of MicroRNA expression profiles of bovine monocyte-derived macrophages infected in vitro with two strains of Streptococcus agalactiae

Anna Lewandowska-Sabat (3546806)
Silje Hansen (5045789)
Trygve Solberg (3559769)
Olav Østerås (5085830)
Bjørg Heringstad (5085827)
Preben Boysen (437280)
Ingrid Olsaker (45143)

April 2018

Table S6. Biological networks associated with top diseases and functions that were overrepresented a...

Additional file 9: of Identification of microRNAs regulating Escherichia coli F18 infection in Meishan weaned piglets

Zhengchang Wu (140532)
Weiyun Qin (3445175)
Seng Wu (3445172)
Guoqiang Zhu (140542)
Wenbin Bao (140546)
Shenglong Wu (140544)

November 2016

Real-time PCR primer information of target genes. The selected genes were identified by real-time PC...

Additional file 6: of Identification of microRNAs regulating Escherichia coli F18 infection in Meishan weaned piglets

Zhengchang Wu (140532)
Weiyun Qin (3445175)
Seng Wu (3445172)
Guoqiang Zhu (140542)
Wenbin Bao (140546)
Shenglong Wu (140544)

November 2016

Gene ontology classification annotated by DAVID for potential target genes of differentially express...

Additional file 1: of Differentially expressed non-coding RNAs induced by transmissible gastroenteritis virus potentially regulate inflammation and NF-ÎşB pathway in porcine intestinal epithelial cell line

Xuelian Ma (5852510)
Xiaomin Zhao (566041)
Zhichao Zhang (530603)
Jianxiong Guo (4571830)
Lijuan Guan (3740323)
Juejun Li (5852513)
Mi Mi (5852516)
Yong Huang (15745)
Dewen Tong (93139)

October 2018

Table S1. The detailed information of differentially expressed mRNAs. Table S2. The detailed informa...

Additional file 5: of Deciphering transcriptome profiles of peripheral blood mononuclear cells in response to PRRSV vaccination in pigs

Md Islam (257385)
Christine Große-Brinkhaus (412998)
Maren Pröll (707145)
Muhammad Uddin (3439820)
Sharmin Rony (3439817)
Dawit Tesfaye (79384)
Ernst Tholen (79379)
Michael Hölker (79376)
Karl Schellander (79383)
Christiane Neuhoff (412997)

August 2016

List of DEGs in PBMCs of pigs at 72 hpv of PRRSV vaccination in pigs compared to control. (XLSX 41 k...

Additional file 7: of Comparison of splenocyte microRNA expression profiles of pigs during acute and chronic toxoplasmosis

Zhaofeng Hou (4371754)
Dandan Liu (303719)
Shijie Su (4371757)
Lele Wang (542468)
Zhenxing Zhao (6279890)
Yifei Ma (206062)
Qiaoqiao Li (355362)
Chuanli Jia (4371751)
Jinjun Xu (777049)
Yonghua Zhou (151227)
Jianping Tao (124288)

January 2019

Table S6. DEMs induced by T. gondii at 10, 25 and 50 DPI regulating the gene expression in Hematopoi...

Additional file 10: of Comparison of splenocyte microRNA expression profiles of pigs during acute and chronic toxoplasmosis

Zhaofeng Hou (4371754)
Dandan Liu (303719)
Shijie Su (4371757)
Lele Wang (542468)
Zhenxing Zhao (6279890)
Yifei Ma (206062)
Qiaoqiao Li (355362)
Chuanli Jia (4371751)
Jinjun Xu (777049)
Yonghua Zhou (151227)
Jianping Tao (124288)

January 2019

Figure S3. Target genes of DEMs between SI-50 and SC-50 samples enriched in BCR signaling pathway. (...

Additional file 5: of Comparison of splenocyte microRNA expression profiles of pigs during acute and chronic toxoplasmosis

Zhaofeng Hou (4371754)
Dandan Liu (303719)
Shijie Su (4371757)
Lele Wang (542468)
Zhenxing Zhao (6279890)
Yifei Ma (206062)
Qiaoqiao Li (355362)
Chuanli Jia (4371751)
Jinjun Xu (777049)
Yonghua Zhou (151227)
Jianping Tao (124288)

January 2019

Table S5. KEGG pathways of target genes of DEMs between the infected and control groups at 10, 25 an...

Additional file 8: of Comparison of splenocyte microRNA expression profiles of pigs during acute and chronic toxoplasmosis

Zhaofeng Hou (4371754)
Dandan Liu (303719)
Shijie Su (4371757)
Lele Wang (542468)
Zhenxing Zhao (6279890)
Yifei Ma (206062)
Qiaoqiao Li (355362)
Chuanli Jia (4371751)
Jinjun Xu (777049)
Yonghua Zhou (151227)
Jianping Tao (124288)

January 2019

Figure S2. Target genes of DEMs between SI-50 and SC-50 samples enriched in Chagas disease pathway. ...

Additional file 11: of Comparison of splenocyte microRNA expression profiles of pigs during acute and chronic toxoplasmosis

Zhaofeng Hou (4371754)
Dandan Liu (303719)
Shijie Su (4371757)
Lele Wang (542468)
Zhenxing Zhao (6279890)
Yifei Ma (206062)
Qiaoqiao Li (355362)
Chuanli Jia (4371751)
Jinjun Xu (777049)
Yonghua Zhou (151227)
Jianping Tao (124288)

January 2019

Table S8. DEMs induced by T. gondii at 50 DPI regulating the gene expression in BCR signaling pathwa...

Additional file 9: of Comparison of splenocyte microRNA expression profiles of pigs during acute and chronic toxoplasmosis

Zhaofeng Hou (4371754)
Dandan Liu (303719)
Shijie Su (4371757)
Lele Wang (542468)
Zhenxing Zhao (6279890)
Yifei Ma (206062)
Qiaoqiao Li (355362)
Chuanli Jia (4371751)
Jinjun Xu (777049)
Yonghua Zhou (151227)
Jianping Tao (124288)

January 2019

Table S7. DEMs induced by T. gondii at 50 DPI regulating the gene expression in Chagas disease pathw...

Additional file 6: Figure S1. of Microarray analysis of long non-coding RNA expression profiles uncovers a Toxoplasma-induced negative regulation of host immune signaling

Wenquan Liu (3755473)
Liyang Huang (3755479)
Qimei Wei (3755467)
Yu Zhang (12946)
Shengnan Zhang (1340988)
Wenting Zhang (342162)
Liya Cai (3755476)
Shaohui Liang (1710667)

March 2018

The additional interaction network of lncRNAs and immune-related genes induced by T. gondii infectio...

Additional file 6: of Dissecting clinical outcome of porcine circovirus type 2 with in vivo derived transcriptomic signatures of host tissue responses

Nicolaas Van Renne (4967131)
Ruifang Wei (4625599)
Nathalie Pochet (150518)
Hans Nauwynck (533091)

November 2018

PorSignDB performance in lymph nodes of PMWS pigs VS healthy pigs. Figure displays enriched PorSignD...

Additional file 2: Table S2. of Microarray analysis of long non-coding RNA expression profiles uncovers a Toxoplasma-induced negative regulation of host immune signaling

Wenquan Liu (3755473)
Liyang Huang (3755479)
Qimei Wei (3755467)
Yu Zhang (12946)
Shengnan Zhang (1340988)
Wenting Zhang (342162)
Liya Cai (3755476)
Shaohui Liang (1710667)

March 2018

A list of significantly differentially expressed lncRNAs between the T. gondii infected and uninfect...

Additional file 4: Table S4. of Microarray analysis of long non-coding RNA expression profiles uncovers a Toxoplasma-induced negative regulation of host immune signaling

Wenquan Liu (3755473)
Liyang Huang (3755479)
Qimei Wei (3755467)
Yu Zhang (12946)
Shengnan Zhang (1340988)
Wenting Zhang (342162)
Liya Cai (3755476)
Shaohui Liang (1710667)

March 2018

A list of significantly differentially expressed mRNAs between the T. gondii infected and uninfected...

Additional file 8: of MicroRNA expression profiles of bovine monocyte-derived macrophages infected in vitro with two strains of Streptococcus agalactiae

Anna Lewandowska-Sabat (3546806)
Silje Hansen (5045789)
Trygve Solberg (3559769)
Olav Østerås (5085830)
Bjørg Heringstad (5085827)
Preben Boysen (437280)
Ingrid Olsaker (45143)

April 2018

Table S6. Biological networks associated with top diseases and functions that were overrepresented a...

Additional file 9: of Identification of microRNAs regulating Escherichia coli F18 infection in Meishan weaned piglets

Zhengchang Wu (140532)
Weiyun Qin (3445175)
Seng Wu (3445172)
Guoqiang Zhu (140542)
Wenbin Bao (140546)
Shenglong Wu (140544)

November 2016

Real-time PCR primer information of target genes. The selected genes were identified by real-time PC...

Additional file 6: of Identification of microRNAs regulating Escherichia coli F18 infection in Meishan weaned piglets

Zhengchang Wu (140532)
Weiyun Qin (3445175)
Seng Wu (3445172)
Guoqiang Zhu (140542)
Wenbin Bao (140546)
Shenglong Wu (140544)

November 2016

Gene ontology classification annotated by DAVID for potential target genes of differentially express...

Additional file 1: of Differentially expressed non-coding RNAs induced by transmissible gastroenteritis virus potentially regulate inflammation and NF-ÎşB pathway in porcine intestinal epithelial cell line

Xuelian Ma (5852510)
Xiaomin Zhao (566041)
Zhichao Zhang (530603)
Jianxiong Guo (4571830)
Lijuan Guan (3740323)
Juejun Li (5852513)
Mi Mi (5852516)
Yong Huang (15745)
Dewen Tong (93139)

October 2018

Table S1. The detailed information of differentially expressed mRNAs. Table S2. The detailed informa...

Additional file 5: of Deciphering transcriptome profiles of peripheral blood mononuclear cells in response to PRRSV vaccination in pigs

Md Islam (257385)
Christine Große-Brinkhaus (412998)
Maren Pröll (707145)
Muhammad Uddin (3439820)
Sharmin Rony (3439817)
Dawit Tesfaye (79384)
Ernst Tholen (79379)
Michael Hölker (79376)
Karl Schellander (79383)
Christiane Neuhoff (412997)

August 2016

List of DEGs in PBMCs of pigs at 72 hpv of PRRSV vaccination in pigs compared to control. (XLSX 41 k...

Additional file 6: of Comparison of splenocyte microRNA expression profiles of pigs during acute and chronic toxoplasmosis

Abstract

Extracted data

Additional file 6: of Comparison of splenocyte microRNA expression profiles of pigs during acute and chronic toxoplasmosis

Abstract

Extracted data

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