Data quality analysis and mapping to reference genome.

(A) RNA-seq raw vs mapped reads where number of samples and reads lie on x and y-axis, respectively, (B) Data (Log10 FPKM) among the biological replicates, where q1 and q2 represent control and infected samples, moreover q1_0, q1_1, q1_2 symbolize three biological replicates of controls, q2_0, q2_1, q2_2 denote three biological replicates of infected samples. (C-E) Gene dispersion, density and DEGs in the dataset.