Additional file 3: of Taxonomy, virulence genes and antimicrobial resistance of Aeromonas isolated from extra-intestinal and intestinal infections

Additional file 2: of Extended spectrum beta-lactamase mediated resistance in carriage and clinical gram-negative ESKAPE bacteria: a comparative study between a district and tertiary hospital in South Africa

Raspail Founou (5967254)
Luria Founou (5967257)
Sabiha Essack (3408035)

November 2018

Table S2. Antibiotic Resistance Profiles and Resistance Genes of Isolates from Single Patients. (DOC...

Additional file 4: Table S3. of Genomic characterisation of clinical and environmental Pseudomonas putida group strains and determination of their role in the transfer of antimicrobial resistance genes to Pseudomonas aeruginosa

Ossowski, Stephan
Dörfel, Daniela
Peter, Silke
Dinkelacker, Ariane
Willmann, Matthias
Vogel, Wichard
Schüle, Leonard
Oberhettinger, Philipp
Liese, Jan
Marschal, Matthias
Bezdan, Daniela
University of Tübingen

November 2017

Average of the nucleotide identity of the P. putida study strains and closely related species. (XLSX...

Additional file 1: of Encyclopedia of bacterial gene circuits whose presence or absence correlate with pathogenicity – a large-scale system analysis of decoded bacterial genomes

Maksim Shestov (3437702)
Santiago Ontañón (3437705)
Aydin Tozeren (84457)

October 2015

List of 949 decoded bacterial genomes present in the KEGG web platform deemed as pathogenic along wi...

Additional file 4: of Taxonomy, virulence genes and antimicrobial resistance of Aeromonas isolated from extra-intestinal and intestinal infections

Yanyan Zhou (158996)
Li Yu (81651)
Zheng Nan (6339491)
Pingping Zhang (383373)
Biao Kan (107255)
Donghui Yan (436617)
Jianrong Su (436615)

February 2019

Clinical data, genes of toxins and drug resistant patterns for 17 patients related to Aeromonas spp....

Additional file 2: of Taxonomy, virulence genes and antimicrobial resistance of Aeromonas isolated from extra-intestinal and intestinal infections

Yanyan Zhou (158996)
Li Yu (81651)
Zheng Nan (6339491)
Pingping Zhang (383373)
Biao Kan (107255)
Donghui Yan (436617)
Jianrong Su (436615)

February 2019

Sequence of primers used for amplification of housekeeping genes and virulence factor genes. (DOC 58...

Additional file 3: of Comparative genome analysis provides deep insights into Aeromonas hydrophila taxonomy and virulence-related factors

Furqan Awan (4959364)
Yuhao Dong (2180608)
Jin Liu (12833)
Nannan Wang (165699)
Muhammad Mushtaq (788834)
Chengping Lu (167772)
Yongjie Liu (3166032)

September 2018

Number of core, accessory and unique genes among the 33 strains of the other ST groups. (DOCX 17 k

Additional file 2: of Comparative genome analysis provides deep insights into Aeromonas hydrophila taxonomy and virulence-related factors

Furqan Awan (4959364)
Yuhao Dong (2180608)
Jin Liu (12833)
Nannan Wang (165699)
Muhammad Mushtaq (788834)
Chengping Lu (167772)
Yongjie Liu (3166032)

September 2018

Number of core, accessory and unique genes among the 16 strains of the ST-251 group. (DOCX 15 kb

Additional file 1: of Comparative genome analysis provides deep insights into Aeromonas hydrophila taxonomy and virulence-related factors

Furqan Awan (4959364)
Yuhao Dong (2180608)
Jin Liu (12833)
Nannan Wang (165699)
Muhammad Mushtaq (788834)
Chengping Lu (167772)
Yongjie Liu (3166032)

September 2018

Number of core, accessory and unique genes among the valid 49 strains of A. hydrophila. (DOCX 19 kb

Additional file 4: of Comparative genome analysis provides deep insights into Aeromonas hydrophila taxonomy and virulence-related factors

Furqan Awan (4959364)
Yuhao Dong (2180608)
Jin Liu (12833)
Nannan Wang (165699)
Muhammad Mushtaq (788834)
Chengping Lu (167772)
Yongjie Liu (3166032)

September 2018

Amino acid frequency of all 49 strains belonging to Aeromonas hydrophila. Comparison of core and dis...

Additional file 3: of Comparative genomics and biological characterization of sequential Pseudomonas aeruginosa isolates from persistent airways infection

Irene Bianconi (108469)
Julie Jeukens (520628)
Luca Freschi (513340)
Beatriz AlcalĂĄ-Franco (3544031)
Marcella Facchini (2461264)
Brian Boyle (276326)
Antonio Molinaro (255584)
Irena Kukavica-Ibrulj (300135)
Burkhard TĂźmmler (3544028)
Roger Levesque (3487352)
Alessandra Bragonzi (108447)

December 2015

Genomic features of RP strains compared to others complete P. aeruginosa genomes [ 4 , 12 , 19 , 23 ...

Additional file 1: of Evaluation of co-transfer of plasmid-mediated fluoroquinolone resistance genes and blaNDM gene in Enterobacteriaceae causing neonatal septicaemia

Shravani Mitra (6409403)
Suchandra Mukherjee (6409406)
Sharmi Naha (6409409)
Pinaki Chattopadhyay (6409412)
Shanta Dutta (185742)
Sulagna Basu (663199)

March 2019

Detailed information of allÂ studied EnterobacteriaceaeÂ :Â MIC values of meropenem and cirpfloxacin...

Additional file 3: of Multi-drug resistant Enterobacter bugandensis species isolated from the International Space Station and comparative genomic analyses with human pathogenic strains

Nitin Singh (672299)
Daniela Bezdan (177730)
Aleksandra Checinska Sielaff (4254322)
Kevin Wheeler (6004580)
Christopher Mason (2673448)
Kasthuri Venkateswaran (273031)

November 2018

Table S3. Detailed function(s) of all the AMR genes associated with 5 ISS strains. (XLSX 14Â kb

Additional file 4: Table S3. of Genomic characterisation of clinical and environmental Pseudomonas putida group strains and determination of their role in the transfer of antimicrobial resistance genes to Pseudomonas aeruginosa

Ossowski, Stephan
Dörfel, Daniela
Peter, Silke
Dinkelacker, Ariane
Willmann, Matthias
Vogel, Wichard
Schüle, Leonard
Oberhettinger, Philipp
Liese, Jan
Marschal, Matthias
Bezdan, Daniela
University of Tübingen

November 2017

Average of the nucleotide identity of the P. putida study strains and closely related species. (XLSX...

Additional file 4: Table S3. of Genomic characterisation of clinical and environmental Pseudomonas putida group strains and determination of their role in the transfer of antimicrobial resistance genes to Pseudomonas aeruginosa

Ossowski, Stephan
Dörfel, Daniela
Peter, Silke
Dinkelacker, Ariane
Willmann, Matthias
Vogel, Wichard
Schüle, Leonard
Oberhettinger, Philipp
Liese, Jan
Marschal, Matthias
Bezdan, Daniela
University of Tübingen

November 2017

Average of the nucleotide identity of the P. putida study strains and closely related species. (XLSX...

Additional file 4: Table S3. of Genomic characterisation of clinical and environmental Pseudomonas putida group strains and determination of their role in the transfer of antimicrobial resistance genes to Pseudomonas aeruginosa

Ossowski, Stephan
Dörfel, Daniela
Peter, Silke
Dinkelacker, Ariane
Willmann, Matthias
Vogel, Wichard
Schüle, Leonard
Oberhettinger, Philipp
Liese, Jan
Marschal, Matthias
Bezdan, Daniela
University of Tübingen

November 2017

Average of the nucleotide identity of the P. putida study strains and closely related species. (XLSX...

Additional file 2: of Extended spectrum beta-lactamase mediated resistance in carriage and clinical gram-negative ESKAPE bacteria: a comparative study between a district and tertiary hospital in South Africa

Raspail Founou (5967254)
Luria Founou (5967257)
Sabiha Essack (3408035)

November 2018

Table S2. Antibiotic Resistance Profiles and Resistance Genes of Isolates from Single Patients. (DOC...

Additional file 4: Table S3. of Genomic characterisation of clinical and environmental Pseudomonas putida group strains and determination of their role in the transfer of antimicrobial resistance genes to Pseudomonas aeruginosa

Ossowski, Stephan
Dörfel, Daniela
Peter, Silke
Dinkelacker, Ariane
Willmann, Matthias
Vogel, Wichard
Schüle, Leonard
Oberhettinger, Philipp
Liese, Jan
Marschal, Matthias
Bezdan, Daniela
University of Tübingen

November 2017

Average of the nucleotide identity of the P. putida study strains and closely related species. (XLSX...

Additional file 1: of Encyclopedia of bacterial gene circuits whose presence or absence correlate with pathogenicity – a large-scale system analysis of decoded bacterial genomes

Maksim Shestov (3437702)
Santiago Ontañón (3437705)
Aydin Tozeren (84457)

October 2015

List of 949 decoded bacterial genomes present in the KEGG web platform deemed as pathogenic along wi...

Additional file 4: of Taxonomy, virulence genes and antimicrobial resistance of Aeromonas isolated from extra-intestinal and intestinal infections

Yanyan Zhou (158996)
Li Yu (81651)
Zheng Nan (6339491)
Pingping Zhang (383373)
Biao Kan (107255)
Donghui Yan (436617)
Jianrong Su (436615)

February 2019

Clinical data, genes of toxins and drug resistant patterns for 17 patients related to Aeromonas spp....

Additional file 2: of Taxonomy, virulence genes and antimicrobial resistance of Aeromonas isolated from extra-intestinal and intestinal infections

Yanyan Zhou (158996)
Li Yu (81651)
Zheng Nan (6339491)
Pingping Zhang (383373)
Biao Kan (107255)
Donghui Yan (436617)
Jianrong Su (436615)

February 2019

Sequence of primers used for amplification of housekeeping genes and virulence factor genes. (DOC 58...

Additional file 3: of Comparative genome analysis provides deep insights into Aeromonas hydrophila taxonomy and virulence-related factors

Furqan Awan (4959364)
Yuhao Dong (2180608)
Jin Liu (12833)
Nannan Wang (165699)
Muhammad Mushtaq (788834)
Chengping Lu (167772)
Yongjie Liu (3166032)

September 2018

Number of core, accessory and unique genes among the 33 strains of the other ST groups. (DOCX 17 k

Additional file 2: of Comparative genome analysis provides deep insights into Aeromonas hydrophila taxonomy and virulence-related factors

Furqan Awan (4959364)
Yuhao Dong (2180608)
Jin Liu (12833)
Nannan Wang (165699)
Muhammad Mushtaq (788834)
Chengping Lu (167772)
Yongjie Liu (3166032)

September 2018

Number of core, accessory and unique genes among the 16 strains of the ST-251 group. (DOCX 15 kb

Additional file 1: of Comparative genome analysis provides deep insights into Aeromonas hydrophila taxonomy and virulence-related factors

Furqan Awan (4959364)
Yuhao Dong (2180608)
Jin Liu (12833)
Nannan Wang (165699)
Muhammad Mushtaq (788834)
Chengping Lu (167772)
Yongjie Liu (3166032)

September 2018

Number of core, accessory and unique genes among the valid 49 strains of A. hydrophila. (DOCX 19 kb

Additional file 4: of Comparative genome analysis provides deep insights into Aeromonas hydrophila taxonomy and virulence-related factors

Furqan Awan (4959364)
Yuhao Dong (2180608)
Jin Liu (12833)
Nannan Wang (165699)
Muhammad Mushtaq (788834)
Chengping Lu (167772)
Yongjie Liu (3166032)

September 2018

Amino acid frequency of all 49 strains belonging to Aeromonas hydrophila. Comparison of core and dis...

Additional file 3: of Comparative genomics and biological characterization of sequential Pseudomonas aeruginosa isolates from persistent airways infection

Irene Bianconi (108469)
Julie Jeukens (520628)
Luca Freschi (513340)
Beatriz AlcalĂĄ-Franco (3544031)
Marcella Facchini (2461264)
Brian Boyle (276326)
Antonio Molinaro (255584)
Irena Kukavica-Ibrulj (300135)
Burkhard TĂźmmler (3544028)
Roger Levesque (3487352)
Alessandra Bragonzi (108447)

December 2015

Genomic features of RP strains compared to others complete P. aeruginosa genomes [ 4 , 12 , 19 , 23 ...

Additional file 1: of Evaluation of co-transfer of plasmid-mediated fluoroquinolone resistance genes and blaNDM gene in Enterobacteriaceae causing neonatal septicaemia

Shravani Mitra (6409403)
Suchandra Mukherjee (6409406)
Sharmi Naha (6409409)
Pinaki Chattopadhyay (6409412)
Shanta Dutta (185742)
Sulagna Basu (663199)

March 2019

Detailed information of allÂ studied EnterobacteriaceaeÂ :Â MIC values of meropenem and cirpfloxacin...

Additional file 3: of Multi-drug resistant Enterobacter bugandensis species isolated from the International Space Station and comparative genomic analyses with human pathogenic strains

Nitin Singh (672299)
Daniela Bezdan (177730)
Aleksandra Checinska Sielaff (4254322)
Kevin Wheeler (6004580)
Christopher Mason (2673448)
Kasthuri Venkateswaran (273031)

November 2018

Table S3. Detailed function(s) of all the AMR genes associated with 5 ISS strains. (XLSX 14Â kb

Additional file 4: Table S3. of Genomic characterisation of clinical and environmental Pseudomonas putida group strains and determination of their role in the transfer of antimicrobial resistance genes to Pseudomonas aeruginosa

Ossowski, Stephan
Dörfel, Daniela
Peter, Silke
Dinkelacker, Ariane
Willmann, Matthias
Vogel, Wichard
Schüle, Leonard
Oberhettinger, Philipp
Liese, Jan
Marschal, Matthias
Bezdan, Daniela
University of Tübingen

November 2017

Average of the nucleotide identity of the P. putida study strains and closely related species. (XLSX...

Additional file 4: Table S3. of Genomic characterisation of clinical and environmental Pseudomonas putida group strains and determination of their role in the transfer of antimicrobial resistance genes to Pseudomonas aeruginosa

Ossowski, Stephan
Dörfel, Daniela
Peter, Silke
Dinkelacker, Ariane
Willmann, Matthias
Vogel, Wichard
Schüle, Leonard
Oberhettinger, Philipp
Liese, Jan
Marschal, Matthias
Bezdan, Daniela
University of Tübingen

November 2017

Average of the nucleotide identity of the P. putida study strains and closely related species. (XLSX...

Additional file 4: Table S3. of Genomic characterisation of clinical and environmental Pseudomonas putida group strains and determination of their role in the transfer of antimicrobial resistance genes to Pseudomonas aeruginosa

Ossowski, Stephan
Dörfel, Daniela
Peter, Silke
Dinkelacker, Ariane
Willmann, Matthias
Vogel, Wichard
Schüle, Leonard
Oberhettinger, Philipp
Liese, Jan
Marschal, Matthias
Bezdan, Daniela
University of Tübingen

November 2017

Average of the nucleotide identity of the P. putida study strains and closely related species. (XLSX...

Additional file 2: of Extended spectrum beta-lactamase mediated resistance in carriage and clinical gram-negative ESKAPE bacteria: a comparative study between a district and tertiary hospital in South Africa

Raspail Founou (5967254)
Luria Founou (5967257)
Sabiha Essack (3408035)

November 2018

Table S2. Antibiotic Resistance Profiles and Resistance Genes of Isolates from Single Patients. (DOC...

Additional file 4: Table S3. of Genomic characterisation of clinical and environmental Pseudomonas putida group strains and determination of their role in the transfer of antimicrobial resistance genes to Pseudomonas aeruginosa

Ossowski, Stephan
Dörfel, Daniela
Peter, Silke
Dinkelacker, Ariane
Willmann, Matthias
Vogel, Wichard
Schüle, Leonard
Oberhettinger, Philipp
Liese, Jan
Marschal, Matthias
Bezdan, Daniela
University of Tübingen

November 2017

Average of the nucleotide identity of the P. putida study strains and closely related species. (XLSX...

Additional file 1: of Encyclopedia of bacterial gene circuits whose presence or absence correlate with pathogenicity – a large-scale system analysis of decoded bacterial genomes

Maksim Shestov (3437702)
Santiago Ontañón (3437705)
Aydin Tozeren (84457)

October 2015

List of 949 decoded bacterial genomes present in the KEGG web platform deemed as pathogenic along wi...

Additional file 3: of Taxonomy, virulence genes and antimicrobial resistance of Aeromonas isolated from extra-intestinal and intestinal infections

Abstract

Extracted data

Additional file 3: of Taxonomy, virulence genes and antimicrobial resistance of Aeromonas isolated from extra-intestinal and intestinal infections

Abstract

Extracted data

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