Additional file 1: of Nationwide epidemiology of carbapenem resistant Klebsiella pneumoniae isolates from Greek hospitals, with regards to plazomicin and aminoglycoside resistance

Irene Galani (6193556)
Konstantina Nafplioti (6370370)
Panagiota Adamou (6370373)
Ilias Karaiskos (4370434)
Helen Giamarellou (65000)
Maria Souli (3828589)

Publication date

February 2019

DOI

10.6084/m9.figshare.7729595.v1

Abstract

Table S1. Additional table includes sequences of primers used for simplex and multiplex PCRs for the detection of genes encoding aminoglycoside modifying enzyme and 16S rRNA methyltransferase genes in Î. pneumoniae. (DOCX 19âkb

Extracted data

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Additional file 1: of Nationwide epidemiology of carbapenem resistant Klebsiella pneumoniae isolates from Greek hospitals, with regards to plazomicin and aminoglycoside resistance

Irene Galani (6193556)
Konstantina Nafplioti (6370370)
Panagiota Adamou (6370373)
Ilias Karaiskos (4370434)
Helen Giamarellou (65000)
Maria Souli (3828589)

Open link

Publication date

February 2019

DOI

10.6084/m9.figshare.7729595.v1

Abstract

Extracted data

Qiucheng Shi (3233457)
Peng Lan (5699819)
Danyan Huang (5148011)
Xiaoting Hua (435699)
Yan Jiang (12139)
Jiancang Zhou (3233460)
Yunsong Yu (496103)

August 2018

Table S1. PCR primers used for studying Serotype and Virulence-Associated Genes of Klebsiella pneumo...

Additional file 1: of Genome-based analysis of Carbapenemase-producing Klebsiella pneumoniae isolates from German hospital patients, 2008-2014

Laura Becker (3559670)
Martin Kaase (4876885)
Yvonne Pfeifer (457305)
Stephan Fuchs (256450)
Annicka Reuss (5168066)
Anja von Laer (5168072)
Muna Sin (5168069)
Miriam Korte-Berwanger (5168063)
Sören Gatermann (425252)
Guido Werner (28655)

May 2018

Figure S1. Origin of the 107 German carbapenemase-producing K. pneumoniae isolates. Regions are show...

Additional file 3: of Epidemiology of carbapenem-resistant Klebsiella pneumoniae bloodstream infections after renal transplantation from donation after cardiac death in a Chinese hospital: a case series analysis

Yuxi Wang (450170)
Hong Lei (53686)
Yuxiang Zhang (412465)
Qiwen Yang (795448)
Yu Wang (12152)
Jiaxing Wang (480379)
Cheng Xu (352754)
Jinggang Yu (5245298)
Lili Zhou (265076)
Xiaoni Kang (5245301)
Lei Cui (165714)

May 2018

Table S4. Analysis of clinical characteristics of 5 kidney recipients infected with Klebsiella pneum...

Additional file 1: of Clonal diversity and genetic profiling of antibiotic resistance among multidrug/carbapenem-resistant Klebsiella pneumoniae isolates from a tertiary care hospital in Saudi Arabia

Taher Zaman (5173748)
Maha Alrodayyan (5173742)
Maha Albladi (5173745)
Mohammed Aldrees (5173739)
Mohammed Siddique (5173751)
Sameera Aljohani (5173754)
Hanan Balkhy (3484613)

May 2018

Minimum inhibitory concentrations table. The minimum inhibitory concentrations for various antibioti...

Additional file 2: Figure S1. of Whole genome sequencing for the molecular characterization of carbapenem-resistant Klebsiella pneumoniae strains isolated at the Italian ASST Fatebenefratelli Sacco Hospital, 2012–2014

Sara Rimoldi (4505101)
Bernardina Gentile (4505092)
Cristina Pagani (4505110)
Annamaria Di Gregorio (4505104)
Anna Anselmo (64079)
Anna Palozzi (4505095)
Antonella Fortunato (4505098)
Valentina Pittiglio (42110)
Anna Lisa Ridolfo (4505107)
Maria Rita Gismondo (4505113)
Giuliano Rizzardini (103636)
Florigio Lista (42114)

October 2017

GoeBURST diagram showing a “population snapshot” of the 68 carbapenem-resistant K. pneumoniae strain...

Additional file 1: of Carbapenem non-susceptibility of Klebsiella pneumoniae isolates in hospitals from 2011 to 2016, data from the German Antimicrobial Resistance Surveillance (ARS)

Uwe Koppe (5338451)
Anja von Laer (5168072)
Lars Kroll (4091710)
Ines Noll (5338454)
Marcel Feig (213466)
Marc Schneider (2103364)
Hermann Claus (255836)
Tim Eckmanns (202473)
Muna Abu Sin (569712)

June 2018

Appendix S1. List of laboratories that participate in ARS and contributed data to this analysis. App...

Additional file 2: of Genome-based analysis of Carbapenemase-producing Klebsiella pneumoniae isolates from German hospital patients, 2008-2014

Laura Becker (3559670)
Martin Kaase (4876885)
Yvonne Pfeifer (457305)
Stephan Fuchs (256450)
Annicka Reuss (5168066)
Anja von Laer (5168072)
Muna Sin (5168069)
Miriam Korte-Berwanger (5168063)
SĂśren Gatermann (5168075)
Guido Werner (28655)

May 2018

Table S1. Metadata of the 107 German carbapenemase-producing, clinical Klebsiella isolates, 2008-201...

Additional file 3: of Genome-based analysis of Carbapenemase-producing Klebsiella pneumoniae isolates from German hospital patients, 2008-2014

Laura Becker (3559670)
Martin Kaase (4876885)
Yvonne Pfeifer (457305)
Stephan Fuchs (256450)
Annicka Reuss (5168066)
Anja von Laer (5168072)
Muna Sin (5168069)
Miriam Korte-Berwanger (5168063)
Sören Gatermann (425252)
Guido Werner (28655)

May 2018

Table S2. Names and sequences of used primers for MLST and PCR amplification of virulence genes and ...

Additional file 1: of Infection-prevention and control interventions to reduce colonisation and infection of intensive care unit-acquired carbapenem-resistant Klebsiella pneumoniae: a 4-year quasi-experimental before-and-after study

Meiling Li (523489)
Xiaoli Wang (46677)
Jiahui Wang (746367)
Ruoming Tan (6197558)
Jingyong Sun (322447)
Lei Li (29537)
Jie Huang (104235)
Jun Wu (4002)
Qiuying Gu (6197570)
Yujin Zhao (6197573)
Jialin Liu (1732168)
Hongping Qu (5564069)

January 2019

Table S1. The microbiological characteristics and genetic relatedness of the 18 collected CRKP isola...

Additional file 2: of Clonal diversity and genetic profiling of antibiotic resistance among multidrug/carbapenem-resistant Klebsiella pneumoniae isolates from a tertiary care hospital in Saudi Arabia

Taher Zaman (5173748)
Maha Alrodayyan (5173742)
Maha Albladi (5173745)
Mohammed Aldrees (5173739)
Mohammed Siddique (5173751)
Sameera Aljohani (5173754)
Hanan Balkhy (3484613)

May 2018

Clonal diversity analysis. Genetic diversity analysis at the nucleotide level across the seven multi...

Additional file 4: of Epidemiology of carbapenem-resistant Klebsiella pneumoniae bloodstream infections after renal transplantation from donation after cardiac death in a Chinese hospital: a case series analysis

Yuxi Wang (450170)
Hong Lei (53686)
Yuxiang Zhang (412465)
Qiwen Yang (795448)
Yu Wang (12152)
Jiaxing Wang (480379)
Cheng Xu (352754)
Jinggang Yu (5245298)
Lili Zhou (265076)
Xiaoni Kang (5245301)
Lei Cui (165714)

May 2018

Table S3. Antibiotic susceptibility of 5 stains of carbapenem-resistant K. pneumoniae isolated from ...

Additional file 1: of A compilation of antimicrobial susceptibility data from a network of 13 Lebanese hospitals reflecting the national situation during 2015â2016

Rima Moghnieh (679199)
Georges Araj (6385613)
Lyn Awad (6385619)
Ziad Daoud (3966905)
Jacques Mokhbat (307136)
Tamima Jisr (6385625)
Dania Abdallah (6385628)
Nadim Azar (6385631)
Noha Irani-Hakimeh (6385634)
Maher Balkis (6385637)
Mona Youssef (6385640)
Gilbert Karayakoupoglou (6385643)
Monzer Hamze (679195)
Madonna Matar (6385646)
Roula Atoui (6385649)
Edmond Abboud (3917414)
Rita Feghali (6385652)
Nadine Yared (6385655)
Rola Husni (6385658)

February 2019

Table S1. The microbiological methods used in detecting certain resistance patterns in the included ...

Additional file 3: of A compilation of antimicrobial susceptibility data from a network of 13 Lebanese hospitals reflecting the national situation during 2015â2016

Rima Moghnieh (679199)
Georges Araj (6385613)
Lyn Awad (6385619)
Ziad Daoud (3966905)
Jacques Mokhbat (307136)
Tamima Jisr (6385625)
Dania Abdallah (6385628)
Nadim Azar (6385631)
Noha Irani-Hakimeh (6385634)
Maher Balkis (6385637)
Mona Youssef (6385640)
Gilbert Karayakoupoglou (6385643)
Monzer Hamze (679195)
Madonna Matar (6385646)
Roula Atoui (6385649)
Edmond Abboud (3917414)
Rita Feghali (6385652)
Nadine Yared (6385655)
Rola Husni (6385658)

February 2019

Table S1. E. coli and Klebsiella spp percent susceptibility* to antibiotics in 13 Lebanese hospitals...

Additional file 1: of Spread of the florfenicol resistance floR gene among clinical Klebsiella pneumoniae isolates in China

Junwan Lu (3396668)
Jinfang Zhang (348213)
Lei Xu (78676)
Yabo Liu (5164103)
Pingping Li (284244)
Tingyuan Zhu (5919623)
Cong Cheng (2140318)
Shunfei Lu (5919626)
Teng Xu (129595)
Huiguang Yi (250472)
Kewei Li (706223)
Wu Zhou (336901)
Peizhen Li (129618)
Liyan Ni (129626)
Qiyu Bao (8800)

November 2018

Table S1 Grouping of 105 floR gene containing sequences and their origins. (PDF 67 kb

Additional file 11: of A compilation of antimicrobial susceptibility data from a network of 13 Lebanese hospitals reflecting the national situation during 2015â2016

Rima Moghnieh (679199)
Georges Araj (6385613)
Lyn Awad (6385619)
Ziad Daoud (3966905)
Jacques Mokhbat (307136)
Tamima Jisr (6385625)
Dania Abdallah (6385628)
Nadim Azar (6385631)
Noha Irani-Hakimeh (6385634)
Maher Balkis (6385637)
Mona Youssef (6385640)
Gilbert Karayakoupoglou (6385643)
Monzer Hamze (679195)
Madonna Matar (6385646)
Roula Atoui (6385649)
Edmond Abboud (3917414)
Rita Feghali (6385652)
Nadine Yared (6385655)
Rola Husni (6385658)

February 2019

Table S1. K. pneumoniae percent susceptibility to carbapenems in countries of the European Union, ba...

Additional file 2: of Diversity of virulence level phenotype of hypervirulent Klebsiella pneumoniae from different sequence type lineage

Qiucheng Shi (3233457)
Peng Lan (5699819)
Danyan Huang (5148011)
Xiaoting Hua (435699)
Yan Jiang (12139)
Jiancang Zhou (3233460)
Yunsong Yu (496103)

August 2018

Table S1. PCR primers used for studying Serotype and Virulence-Associated Genes of Klebsiella pneumo...

Additional file 1: of Genome-based analysis of Carbapenemase-producing Klebsiella pneumoniae isolates from German hospital patients, 2008-2014

Laura Becker (3559670)
Martin Kaase (4876885)
Yvonne Pfeifer (457305)
Stephan Fuchs (256450)
Annicka Reuss (5168066)
Anja von Laer (5168072)
Muna Sin (5168069)
Miriam Korte-Berwanger (5168063)
Sören Gatermann (425252)
Guido Werner (28655)

May 2018

Figure S1. Origin of the 107 German carbapenemase-producing K. pneumoniae isolates. Regions are show...

Yuxi Wang (450170)
Hong Lei (53686)
Yuxiang Zhang (412465)
Qiwen Yang (795448)
Yu Wang (12152)
Jiaxing Wang (480379)
Cheng Xu (352754)
Jinggang Yu (5245298)
Lili Zhou (265076)
Xiaoni Kang (5245301)
Lei Cui (165714)

May 2018

Table S4. Analysis of clinical characteristics of 5 kidney recipients infected with Klebsiella pneum...

Additional file 1: of Clonal diversity and genetic profiling of antibiotic resistance among multidrug/carbapenem-resistant Klebsiella pneumoniae isolates from a tertiary care hospital in Saudi Arabia

Taher Zaman (5173748)
Maha Alrodayyan (5173742)
Maha Albladi (5173745)
Mohammed Aldrees (5173739)
Mohammed Siddique (5173751)
Sameera Aljohani (5173754)
Hanan Balkhy (3484613)

May 2018

Minimum inhibitory concentrations table. The minimum inhibitory concentrations for various antibioti...

Sara Rimoldi (4505101)
Bernardina Gentile (4505092)
Cristina Pagani (4505110)
Annamaria Di Gregorio (4505104)
Anna Anselmo (64079)
Anna Palozzi (4505095)
Antonella Fortunato (4505098)
Valentina Pittiglio (42110)
Anna Lisa Ridolfo (4505107)
Maria Rita Gismondo (4505113)
Giuliano Rizzardini (103636)
Florigio Lista (42114)

October 2017

GoeBURST diagram showing a “population snapshot” of the 68 carbapenem-resistant K. pneumoniae strain...

Additional file 1: of Carbapenem non-susceptibility of Klebsiella pneumoniae isolates in hospitals from 2011 to 2016, data from the German Antimicrobial Resistance Surveillance (ARS)

Uwe Koppe (5338451)
Anja von Laer (5168072)
Lars Kroll (4091710)
Ines Noll (5338454)
Marcel Feig (213466)
Marc Schneider (2103364)
Hermann Claus (255836)
Tim Eckmanns (202473)
Muna Abu Sin (569712)

June 2018

Appendix S1. List of laboratories that participate in ARS and contributed data to this analysis. App...

Additional file 2: of Genome-based analysis of Carbapenemase-producing Klebsiella pneumoniae isolates from German hospital patients, 2008-2014

Laura Becker (3559670)
Martin Kaase (4876885)
Yvonne Pfeifer (457305)
Stephan Fuchs (256450)
Annicka Reuss (5168066)
Anja von Laer (5168072)
Muna Sin (5168069)
Miriam Korte-Berwanger (5168063)
SĂśren Gatermann (5168075)
Guido Werner (28655)

May 2018

Table S1. Metadata of the 107 German carbapenemase-producing, clinical Klebsiella isolates, 2008-201...

Additional file 3: of Genome-based analysis of Carbapenemase-producing Klebsiella pneumoniae isolates from German hospital patients, 2008-2014

Laura Becker (3559670)
Martin Kaase (4876885)
Yvonne Pfeifer (457305)
Stephan Fuchs (256450)
Annicka Reuss (5168066)
Anja von Laer (5168072)
Muna Sin (5168069)
Miriam Korte-Berwanger (5168063)
Sören Gatermann (425252)
Guido Werner (28655)

May 2018

Table S2. Names and sequences of used primers for MLST and PCR amplification of virulence genes and ...

Meiling Li (523489)
Xiaoli Wang (46677)
Jiahui Wang (746367)
Ruoming Tan (6197558)
Jingyong Sun (322447)
Lei Li (29537)
Jie Huang (104235)
Jun Wu (4002)
Qiuying Gu (6197570)
Yujin Zhao (6197573)
Jialin Liu (1732168)
Hongping Qu (5564069)

January 2019

Table S1. The microbiological characteristics and genetic relatedness of the 18 collected CRKP isola...

Additional file 2: of Clonal diversity and genetic profiling of antibiotic resistance among multidrug/carbapenem-resistant Klebsiella pneumoniae isolates from a tertiary care hospital in Saudi Arabia

Taher Zaman (5173748)
Maha Alrodayyan (5173742)
Maha Albladi (5173745)
Mohammed Aldrees (5173739)
Mohammed Siddique (5173751)
Sameera Aljohani (5173754)
Hanan Balkhy (3484613)

May 2018

Clonal diversity analysis. Genetic diversity analysis at the nucleotide level across the seven multi...

Yuxi Wang (450170)
Hong Lei (53686)
Yuxiang Zhang (412465)
Qiwen Yang (795448)
Yu Wang (12152)
Jiaxing Wang (480379)
Cheng Xu (352754)
Jinggang Yu (5245298)
Lili Zhou (265076)
Xiaoni Kang (5245301)
Lei Cui (165714)

May 2018

Table S3. Antibiotic susceptibility of 5 stains of carbapenem-resistant K. pneumoniae isolated from ...

Additional file 1: of A compilation of antimicrobial susceptibility data from a network of 13 Lebanese hospitals reflecting the national situation during 2015â2016

Rima Moghnieh (679199)
Georges Araj (6385613)
Lyn Awad (6385619)
Ziad Daoud (3966905)
Jacques Mokhbat (307136)
Tamima Jisr (6385625)
Dania Abdallah (6385628)
Nadim Azar (6385631)
Noha Irani-Hakimeh (6385634)
Maher Balkis (6385637)
Mona Youssef (6385640)
Gilbert Karayakoupoglou (6385643)
Monzer Hamze (679195)
Madonna Matar (6385646)
Roula Atoui (6385649)
Edmond Abboud (3917414)
Rita Feghali (6385652)
Nadine Yared (6385655)
Rola Husni (6385658)

February 2019

Table S1. The microbiological methods used in detecting certain resistance patterns in the included ...

Additional file 3: of A compilation of antimicrobial susceptibility data from a network of 13 Lebanese hospitals reflecting the national situation during 2015â2016

Rima Moghnieh (679199)
Georges Araj (6385613)
Lyn Awad (6385619)
Ziad Daoud (3966905)
Jacques Mokhbat (307136)
Tamima Jisr (6385625)
Dania Abdallah (6385628)
Nadim Azar (6385631)
Noha Irani-Hakimeh (6385634)
Maher Balkis (6385637)
Mona Youssef (6385640)
Gilbert Karayakoupoglou (6385643)
Monzer Hamze (679195)
Madonna Matar (6385646)
Roula Atoui (6385649)
Edmond Abboud (3917414)
Rita Feghali (6385652)
Nadine Yared (6385655)
Rola Husni (6385658)

February 2019

Table S1. E. coli and Klebsiella spp percent susceptibility* to antibiotics in 13 Lebanese hospitals...

Additional file 1: of Spread of the florfenicol resistance floR gene among clinical Klebsiella pneumoniae isolates in China

Junwan Lu (3396668)
Jinfang Zhang (348213)
Lei Xu (78676)
Yabo Liu (5164103)
Pingping Li (284244)
Tingyuan Zhu (5919623)
Cong Cheng (2140318)
Shunfei Lu (5919626)
Teng Xu (129595)
Huiguang Yi (250472)
Kewei Li (706223)
Wu Zhou (336901)
Peizhen Li (129618)
Liyan Ni (129626)
Qiyu Bao (8800)

November 2018

Table S1 Grouping of 105 floR gene containing sequences and their origins. (PDF 67 kb

Additional file 11: of A compilation of antimicrobial susceptibility data from a network of 13 Lebanese hospitals reflecting the national situation during 2015â2016

Rima Moghnieh (679199)
Georges Araj (6385613)
Lyn Awad (6385619)
Ziad Daoud (3966905)
Jacques Mokhbat (307136)
Tamima Jisr (6385625)
Dania Abdallah (6385628)
Nadim Azar (6385631)
Noha Irani-Hakimeh (6385634)
Maher Balkis (6385637)
Mona Youssef (6385640)
Gilbert Karayakoupoglou (6385643)
Monzer Hamze (679195)
Madonna Matar (6385646)
Roula Atoui (6385649)
Edmond Abboud (3917414)
Rita Feghali (6385652)
Nadine Yared (6385655)
Rola Husni (6385658)

February 2019

Table S1. K. pneumoniae percent susceptibility to carbapenems in countries of the European Union, ba...

Additional file 2: of Diversity of virulence level phenotype of hypervirulent Klebsiella pneumoniae from different sequence type lineage

Qiucheng Shi (3233457)
Peng Lan (5699819)
Danyan Huang (5148011)
Xiaoting Hua (435699)
Yan Jiang (12139)
Jiancang Zhou (3233460)
Yunsong Yu (496103)

August 2018

Table S1. PCR primers used for studying Serotype and Virulence-Associated Genes of Klebsiella pneumo...

Additional file 1: of Genome-based analysis of Carbapenemase-producing Klebsiella pneumoniae isolates from German hospital patients, 2008-2014

Laura Becker (3559670)
Martin Kaase (4876885)
Yvonne Pfeifer (457305)
Stephan Fuchs (256450)
Annicka Reuss (5168066)
Anja von Laer (5168072)
Muna Sin (5168069)
Miriam Korte-Berwanger (5168063)
Sören Gatermann (425252)
Guido Werner (28655)

May 2018

Figure S1. Origin of the 107 German carbapenemase-producing K. pneumoniae isolates. Regions are show...

Yuxi Wang (450170)
Hong Lei (53686)
Yuxiang Zhang (412465)
Qiwen Yang (795448)
Yu Wang (12152)
Jiaxing Wang (480379)
Cheng Xu (352754)
Jinggang Yu (5245298)
Lili Zhou (265076)
Xiaoni Kang (5245301)
Lei Cui (165714)

May 2018

Table S4. Analysis of clinical characteristics of 5 kidney recipients infected with Klebsiella pneum...

Additional file 1: of Nationwide epidemiology of carbapenem resistant Klebsiella pneumoniae isolates from Greek hospitals, with regards to plazomicin and aminoglycoside resistance

Abstract

Extracted data

Additional file 1: of Nationwide epidemiology of carbapenem resistant Klebsiella pneumoniae isolates from Greek hospitals, with regards to plazomicin and aminoglycoside resistance

Abstract

Extracted data

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