Additional file 6: of Involvement of jasmonic acid, ethylene and salicylic acid signaling pathways behind the systemic resistance induced by Trichoderma longibrachiatum H9 in cucumber

Additional file 2: of Tomato histone H2B monoubiquitination enzymes SlHUB1 and SlHUB2 contribute to disease resistance against Botrytis cinerea through modulating the balance between SA- and JA/ET-mediated signaling pathways

Yafen Zhang (596132)
Dayong Li (205740)
Huijuan Zhang (439573)
Yongbo Hong (596133)
Lei Huang (35191)
Shixia Liu (596134)
Xiaohui Li (73588)
Zhigang Ouyang (596131)
Fengming Song (596135)

October 2015

Silencing efficiency in pTRV2- SlPDS -infiltrated tomato plants. Two-week-old seedlings were infiltr...

Additional file 1: of Modulation of auxin and cytokinin responses by early steps of the phenylpropanoid pathway

Jasmina Kurepa (1908163)
Timothy Shull (5956967)
Sumudu Karunadasa (5956970)
Jan Smalle (1908169)

November 2018

Figure S1. Impact of PP intermediates on growth. Figure S2. Sensitivity of ref3 alleles in the cytok...

Additional file 1: of Lignin metabolism involves Botrytis cinerea BcGs1- induced defense response in tomato

Chenyu Yang (5337575)
Yingbo Liang (4917796)
Dewen Qiu (163665)
Hongmei Zeng (163663)
Jingjing Yuan (2028889)
Xiufen Yang (163669)

June 2018

Figure S1. Purification and necrosis activity of the protein BcGs1. A: SDS-PAGE analysis of purified...

Additional file 7: of Involvement of jasmonic acid, ethylene and salicylic acid signaling pathways behind the systemic resistance induced by Trichoderma longibrachiatum H9 in cucumber

Min Yuan (202757)
Yuanyuan Huang (671992)
Weina Ge (5197784)
Zhenhua Jia (4584727)
Shuishan Song (4584730)
Lan Zhang (90951)
Yali Huang (621760)

February 2019

Table S7. Enriched KEGG pathways based on up-regulated DEPs in the T. longibrachiatum H9-inoculated ...

Additional file 9: of Involvement of jasmonic acid, ethylene and salicylic acid signaling pathways behind the systemic resistance induced by Trichoderma longibrachiatum H9 in cucumber

Min Yuan (202757)
Yuanyuan Huang (671992)
Weina Ge (5197784)
Zhenhua Jia (4584727)
Shuishan Song (4584730)
Lan Zhang (90951)
Yali Huang (621760)

February 2019

Figure S1. The top 20 enriched KEGG pathways based on down-regulated DEGs/DEPs in the T. longibrachi...

Additional file 2: of Involvement of jasmonic acid, ethylene and salicylic acid signaling pathways behind the systemic resistance induced by Trichoderma longibrachiatum H9 in cucumber

Min Yuan (202757)
Yuanyuan Huang (671992)
Weina Ge (5197784)
Zhenhua Jia (4584727)
Shuishan Song (4584730)
Lan Zhang (90951)
Yali Huang (621760)

February 2019

Table S2. Enriched GO terms based on up-regulated DEGs in the T. longibrachiatum H9-inoculated plant...

Additional file 4: of Involvement of jasmonic acid, ethylene and salicylic acid signaling pathways behind the systemic resistance induced by Trichoderma longibrachiatum H9 in cucumber

Min Yuan (202757)
Yuanyuan Huang (671992)
Weina Ge (5197784)
Zhenhua Jia (4584727)
Shuishan Song (4584730)
Lan Zhang (90951)
Yali Huang (621760)

February 2019

Table S4. Enriched GO terms based on down-regulated DEGs in the T. longibrachiatum H9-inoculated pla...

Additional file 3: of Involvement of jasmonic acid, ethylene and salicylic acid signaling pathways behind the systemic resistance induced by Trichoderma longibrachiatum H9 in cucumber

Min Yuan (202757)
Yuanyuan Huang (671992)
Weina Ge (5197784)
Zhenhua Jia (4584727)
Shuishan Song (4584730)
Lan Zhang (90951)
Yali Huang (621760)

February 2019

Table S3. Enriched GO terms based on up-regulated DEPs in the T. longibrachiatum H9-inoculated plant...

Additional file 5: of Involvement of jasmonic acid, ethylene and salicylic acid signaling pathways behind the systemic resistance induced by Trichoderma longibrachiatum H9 in cucumber

Min Yuan (202757)
Yuanyuan Huang (671992)
Weina Ge (5197784)
Zhenhua Jia (4584727)
Shuishan Song (4584730)
Lan Zhang (90951)
Yali Huang (621760)

February 2019

Table S5. Enriched GO terms based on down-regulated DEPs in the T. longibrachiatum H9-inoculated pla...

Involvement of jasmonic acid, ethylene and salicylic acid signaling pathways behind the systemic resistance induced by Trichoderma longibrachiatum H9 in cucumber

Min Yuan
Yuanyuan Huang
Weina Ge
Zhenhua Jia
Shuishan Song
Lan Zhang
Yali Huang

February 2019

Abstract Background Trichoderma spp. are effective biocontrol agents for many plant pathogens, thus ...

Additional file 1: of Trans-chalcone activity against Trichophyton rubrum relies on an interplay between signaling pathways related to cell wall integrity and fatty acid metabolism

Tamires Bitencourt (6727421)
Claudia Macedo (5650693)
Matheus Franco (6727424)
Marina Rocha (6727427)
Igor Moreli (6727430)
Bruna Cantelli (6727433)
Pablo Sanches (6727436)
Rene Beleboni (6727439)
Iran Malavazi (81124)
Geraldo Passos (6727442)
Mozart Marins (5641772)
Ana Fachin (6727445)

May 2019

Table S1. Genes modulated by Trichophyton rubrum during growth on protein sources, and after trans-c...

Additional file 6: Table S7. of Short oligogalacturonides induce pathogen resistance-associated gene expression in Arabidopsis thaliana

PĂ¤r Davidsson (3682270)
Martin Broberg (124305)
Tarja Kariola (3682267)
Nina Sipari (522908)
Minna Pirhonen (124314)
E. Palva (3682264)

January 2017

GSEA results based on gene expression data from trimer treated plants, disregarding genesets also af...

Additional file 6: of Omics for understanding the tolerant mechanism of Trichoderma asperellum TJ01 to organophosphorus pesticide dichlorvos

Qiong Wu (84327)
Mi Ni (698155)
Guisheng Wang (5615051)
Qianqian Liu (381114)
Meixia Yu (5615060)
Jun Tang (32983)

August 2018

Impact of 500Â Îźg/mL dichlorvos on flavonoids and alkaloids of T. asperellum TJ01 after 24Â h treat...

Additional file 3: of HyPRP1 performs a role in negatively regulating cotton resistance to V. dahliae via the thickening of cell walls and ROS accumulation

Jun Yang (2084)
Yan Zhang (8098)
Xingfen Wang (434376)
Weiqiao Wang (6062624)
Zhikun Li (434377)
Jinhua Wu (1399762)
Guoning Wang (6062627)
Liqiang Wu (649391)
Guiyin Zhang (434379)
Zhiying Ma (434380)

December 2018

Figure S3. At approximately two weeks post Agrobacterium infiltration, the leaves of CLA1-VIGS plant...

Additional file 3: of Albugo-imposed changes to tryptophan-derived antimicrobial metabolite biosynthesis may contribute to suppression of non-host resistance to Phytophthora infestans in Arabidopsis thaliana

David Prince (237087)
Ghanasyam Rallapalli (495267)
Deyang Xu (3848530)
Henk-jan Schoonbeek (3848521)
Volkan Ăevik (3848524)
Shuta Asai (495266)
Eric Kemen (215150)
Neftaly Cruz-Mireles (3275193)
Ariane Kemen (3848518)
Khaoula Belhaj (3275187)
Sebastian Schornack (142120)
Sophien Kamoun (6132)
Eric Holub (215175)
Barbara Halkier (3848527)
Jonathan Jones (411666)

March 2017

Differentially regulated genes at each time point and overlap between genes regulated by each pathog...

Additional file 2: of Tomato histone H2B monoubiquitination enzymes SlHUB1 and SlHUB2 contribute to disease resistance against Botrytis cinerea through modulating the balance between SA- and JA/ET-mediated signaling pathways

Yafen Zhang (596132)
Dayong Li (205740)
Huijuan Zhang (439573)
Yongbo Hong (596133)
Lei Huang (35191)
Shixia Liu (596134)
Xiaohui Li (73588)
Zhigang Ouyang (596131)
Fengming Song (596135)

October 2015

Silencing efficiency in pTRV2- SlPDS -infiltrated tomato plants. Two-week-old seedlings were infiltr...

Additional file 1: of Modulation of auxin and cytokinin responses by early steps of the phenylpropanoid pathway

Jasmina Kurepa (1908163)
Timothy Shull (5956967)
Sumudu Karunadasa (5956970)
Jan Smalle (1908169)

November 2018

Figure S1. Impact of PP intermediates on growth. Figure S2. Sensitivity of ref3 alleles in the cytok...

Additional file 1: of Lignin metabolism involves Botrytis cinerea BcGs1- induced defense response in tomato

Chenyu Yang (5337575)
Yingbo Liang (4917796)
Dewen Qiu (163665)
Hongmei Zeng (163663)
Jingjing Yuan (2028889)
Xiufen Yang (163669)

June 2018

Figure S1. Purification and necrosis activity of the protein BcGs1. A: SDS-PAGE analysis of purified...

Additional file 7: of Involvement of jasmonic acid, ethylene and salicylic acid signaling pathways behind the systemic resistance induced by Trichoderma longibrachiatum H9 in cucumber

Min Yuan (202757)
Yuanyuan Huang (671992)
Weina Ge (5197784)
Zhenhua Jia (4584727)
Shuishan Song (4584730)
Lan Zhang (90951)
Yali Huang (621760)

February 2019

Table S7. Enriched KEGG pathways based on up-regulated DEPs in the T. longibrachiatum H9-inoculated ...

Additional file 9: of Involvement of jasmonic acid, ethylene and salicylic acid signaling pathways behind the systemic resistance induced by Trichoderma longibrachiatum H9 in cucumber

Min Yuan (202757)
Yuanyuan Huang (671992)
Weina Ge (5197784)
Zhenhua Jia (4584727)
Shuishan Song (4584730)
Lan Zhang (90951)
Yali Huang (621760)

February 2019

Figure S1. The top 20 enriched KEGG pathways based on down-regulated DEGs/DEPs in the T. longibrachi...

Additional file 2: of Involvement of jasmonic acid, ethylene and salicylic acid signaling pathways behind the systemic resistance induced by Trichoderma longibrachiatum H9 in cucumber

Min Yuan (202757)
Yuanyuan Huang (671992)
Weina Ge (5197784)
Zhenhua Jia (4584727)
Shuishan Song (4584730)
Lan Zhang (90951)
Yali Huang (621760)

February 2019

Table S2. Enriched GO terms based on up-regulated DEGs in the T. longibrachiatum H9-inoculated plant...

Additional file 4: of Involvement of jasmonic acid, ethylene and salicylic acid signaling pathways behind the systemic resistance induced by Trichoderma longibrachiatum H9 in cucumber

Min Yuan (202757)
Yuanyuan Huang (671992)
Weina Ge (5197784)
Zhenhua Jia (4584727)
Shuishan Song (4584730)
Lan Zhang (90951)
Yali Huang (621760)

February 2019

Table S4. Enriched GO terms based on down-regulated DEGs in the T. longibrachiatum H9-inoculated pla...

Additional file 3: of Involvement of jasmonic acid, ethylene and salicylic acid signaling pathways behind the systemic resistance induced by Trichoderma longibrachiatum H9 in cucumber

Min Yuan (202757)
Yuanyuan Huang (671992)
Weina Ge (5197784)
Zhenhua Jia (4584727)
Shuishan Song (4584730)
Lan Zhang (90951)
Yali Huang (621760)

February 2019

Table S3. Enriched GO terms based on up-regulated DEPs in the T. longibrachiatum H9-inoculated plant...

Additional file 5: of Involvement of jasmonic acid, ethylene and salicylic acid signaling pathways behind the systemic resistance induced by Trichoderma longibrachiatum H9 in cucumber

Min Yuan (202757)
Yuanyuan Huang (671992)
Weina Ge (5197784)
Zhenhua Jia (4584727)
Shuishan Song (4584730)
Lan Zhang (90951)
Yali Huang (621760)

February 2019

Table S5. Enriched GO terms based on down-regulated DEPs in the T. longibrachiatum H9-inoculated pla...

Involvement of jasmonic acid, ethylene and salicylic acid signaling pathways behind the systemic resistance induced by Trichoderma longibrachiatum H9 in cucumber

Min Yuan
Yuanyuan Huang
Weina Ge
Zhenhua Jia
Shuishan Song
Lan Zhang
Yali Huang

February 2019

Abstract Background Trichoderma spp. are effective biocontrol agents for many plant pathogens, thus ...

Additional file 1: of Trans-chalcone activity against Trichophyton rubrum relies on an interplay between signaling pathways related to cell wall integrity and fatty acid metabolism

Tamires Bitencourt (6727421)
Claudia Macedo (5650693)
Matheus Franco (6727424)
Marina Rocha (6727427)
Igor Moreli (6727430)
Bruna Cantelli (6727433)
Pablo Sanches (6727436)
Rene Beleboni (6727439)
Iran Malavazi (81124)
Geraldo Passos (6727442)
Mozart Marins (5641772)
Ana Fachin (6727445)

May 2019

Table S1. Genes modulated by Trichophyton rubrum during growth on protein sources, and after trans-c...

Additional file 6: Table S7. of Short oligogalacturonides induce pathogen resistance-associated gene expression in Arabidopsis thaliana

PĂ¤r Davidsson (3682270)
Martin Broberg (124305)
Tarja Kariola (3682267)
Nina Sipari (522908)
Minna Pirhonen (124314)
E. Palva (3682264)

January 2017

GSEA results based on gene expression data from trimer treated plants, disregarding genesets also af...

Additional file 6: of Omics for understanding the tolerant mechanism of Trichoderma asperellum TJ01 to organophosphorus pesticide dichlorvos

Qiong Wu (84327)
Mi Ni (698155)
Guisheng Wang (5615051)
Qianqian Liu (381114)
Meixia Yu (5615060)
Jun Tang (32983)

August 2018

Impact of 500Â Îźg/mL dichlorvos on flavonoids and alkaloids of T. asperellum TJ01 after 24Â h treat...

Additional file 3: of HyPRP1 performs a role in negatively regulating cotton resistance to V. dahliae via the thickening of cell walls and ROS accumulation

Jun Yang (2084)
Yan Zhang (8098)
Xingfen Wang (434376)
Weiqiao Wang (6062624)
Zhikun Li (434377)
Jinhua Wu (1399762)
Guoning Wang (6062627)
Liqiang Wu (649391)
Guiyin Zhang (434379)
Zhiying Ma (434380)

December 2018

Figure S3. At approximately two weeks post Agrobacterium infiltration, the leaves of CLA1-VIGS plant...

Additional file 3: of Albugo-imposed changes to tryptophan-derived antimicrobial metabolite biosynthesis may contribute to suppression of non-host resistance to Phytophthora infestans in Arabidopsis thaliana

David Prince (237087)
Ghanasyam Rallapalli (495267)
Deyang Xu (3848530)
Henk-jan Schoonbeek (3848521)
Volkan Ăevik (3848524)
Shuta Asai (495266)
Eric Kemen (215150)
Neftaly Cruz-Mireles (3275193)
Ariane Kemen (3848518)
Khaoula Belhaj (3275187)
Sebastian Schornack (142120)
Sophien Kamoun (6132)
Eric Holub (215175)
Barbara Halkier (3848527)
Jonathan Jones (411666)

March 2017

Differentially regulated genes at each time point and overlap between genes regulated by each pathog...

Additional file 2: of Tomato histone H2B monoubiquitination enzymes SlHUB1 and SlHUB2 contribute to disease resistance against Botrytis cinerea through modulating the balance between SA- and JA/ET-mediated signaling pathways

Yafen Zhang (596132)
Dayong Li (205740)
Huijuan Zhang (439573)
Yongbo Hong (596133)
Lei Huang (35191)
Shixia Liu (596134)
Xiaohui Li (73588)
Zhigang Ouyang (596131)
Fengming Song (596135)

October 2015

Silencing efficiency in pTRV2- SlPDS -infiltrated tomato plants. Two-week-old seedlings were infiltr...

Additional file 1: of Modulation of auxin and cytokinin responses by early steps of the phenylpropanoid pathway

Jasmina Kurepa (1908163)
Timothy Shull (5956967)
Sumudu Karunadasa (5956970)
Jan Smalle (1908169)

November 2018

Figure S1. Impact of PP intermediates on growth. Figure S2. Sensitivity of ref3 alleles in the cytok...

Additional file 1: of Lignin metabolism involves Botrytis cinerea BcGs1- induced defense response in tomato

Chenyu Yang (5337575)
Yingbo Liang (4917796)
Dewen Qiu (163665)
Hongmei Zeng (163663)
Jingjing Yuan (2028889)
Xiufen Yang (163669)

June 2018

Figure S1. Purification and necrosis activity of the protein BcGs1. A: SDS-PAGE analysis of purified...

Additional file 6: of Involvement of jasmonic acid, ethylene and salicylic acid signaling pathways behind the systemic resistance induced by Trichoderma longibrachiatum H9 in cucumber

Abstract

Extracted data

Additional file 6: of Involvement of jasmonic acid, ethylene and salicylic acid signaling pathways behind the systemic resistance induced by Trichoderma longibrachiatum H9 in cucumber

Abstract

Extracted data

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